Nucleotide Global Alignment

Description

• Query: TRCN0000468031
• Subject: XM_005270205.1
• Aligned Length: 1602
• Identities: 1158
• Gaps: 205

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||||||||.|..|||||||||||.|||||||||||.||||||||||.||||||..||||||||||.|||||
Sbjct    1  ATGGCCACCACCGCCACCTGCACCCGTTTCACCGACGACTACCAGCTCTTCGAGGAGCTTGGCAAGGGTGCTTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA  143
            ||||||||||||..|.|||||.|||     |||  |||   .||.|||||.|||||.||.||||||||.|||||
Sbjct   75  CTCTGTGGTCCGCAGGTGTGTGAAGAAAACCTC--CAC---GCAGGAGTACGCAGCAAAAATCATCAATACCAA  143

Query  144  GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA  217
            ||||.||||.|||.|.|||||||||||.||.||..|.|||||||||||.||.||.||||||||.|||.|.||||
Sbjct  144  GAAGTTGTCTGCCCGGGATCACCAGAAACTAGAACGTGAGGCTCGGATATGTCGACTTCTGAAACATCCAAACA  217

Query  218  TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG  291
            |||||||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct  218  TCGTGCGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGGGAG  291

Query  292  CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA  365
            ||.|||||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.|||||
Sbjct  292  CTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGA  365

Query  366  GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC  438
            |...|||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.
Sbjct  366  GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGT  438

Query  439  AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG  512
            ||.|||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||
Sbjct  439  AAATGCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG  512

Query  513  GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG  586
            |||||||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct  513  GTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG  586

Query  587  ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC  660
            |.||||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||
Sbjct  587  ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCAC  660

Query  661  AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC  734
            ||||||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.|||||||||||
Sbjct  661  AAGCTGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGC  734

Query  735  CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC  808
            |||.|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||
Sbjct  735  CAAGAACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACC  808

Query  809  CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC  882
            ||||||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||
Sbjct  809  CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTC  882

Query  883  AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC------------  944
            ||||||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.|||||            
Sbjct  883  AATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGTTGGCAGGCA  956

Query  945  ---------------------------------------------------AGCAGCCAAGAGTTTACTCAACA  967
                                                               |||.|||||.||..||.|.||||
Sbjct  957  GAGCTCCGCCCCCGCCTCGCCTGCCGCGAGCGCCGCCGGCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA  1030

Query  968  AGAAAGCAGAT---GGAGTCA---AGCCCCAGACGAATAGCAC-------CAAAAACAGTGCAGCCGCCACCAG  1028
            ||||..|.|||   ||.||||   ||||.||.||      |||       ||.||          |||.| |||
Sbjct 1031  AGAAGTCGGATGGCGGTGTCAAGGAGCCACAAAC------CACTGTGGTACACAA----------CGCTA-CAG  1087

Query 1029  CCCCAAAGGGACGCTTC-----CTCCTGCCGCCCTGGAGTCTTCTGACAG-----TGCCAATACCACCATAGAG  1092
                 |.||||    ||     ||||                    ||||     || |||.|||||||.|||.
Sbjct 1088  -----ATGGGA----TCAAGGGCTCC--------------------ACAGAGAGCTG-CAACACCACCACAGAA  1131

Query 1093  GATGAAGACGCT-AAAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACG  1165
            |||||.||| || ||||..||.||.||||||||||||||||..||.||.|||||.||.||.|||.|||||||.|
Sbjct 1132  GATGAGGAC-CTCAAAGTGCGAAAACAGGAGATCATTAAGATTACAGAACAGCTGATTGAAGCCATCAACAATG  1204

Query 1166  GTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTG  1239
            |.|||||||||||||||.||||.||.|||||.|||||.||.||.||.|||||||||||.||.||.||.|||||.
Sbjct 1205  GGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTGAGGCCCTTGGTAACCTC  1278

Query 1240  GTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGAC  1313
            ||.||.||||||||.|||||.|..||.|||||.|||||.||.|||.||||||||||||||||.|||||.||.||
Sbjct 1279  GTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCATACCAC  1352

Query 1314  CATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACA  1387
            ||||||.|||||||||||.|||||.|||||.|||||.||.||.||||||||.||||||||.|||||.|||||||
Sbjct 1353  CATCCTAAACCCACACGTCCACGTGATTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCCTCACCCAGTACA  1426

Query 1388  TTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCCCCG----------------  1445
            |.|||||||||||.|||||.||||||||||||||.||.||||||||.||.||||.|||                
Sbjct 1427  TCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCGGGTCTGGCACCGTCGGGATGGCAAGTGG  1500

Query 1446  -----------------CTG--CAG-----------------------  1451
                             |||  |||                       
Sbjct 1501  CTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGCAG  1548