Nucleotide Global Alignment
Description
- Query:
- TRCN0000468031
- Subject:
- XM_006500836.3
- Aligned Length:
- 1581
- Identities:
- 795
- Gaps:
- 601
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC 444
|||||.||.|||||..|.|||||.|||||.|||||..|||||.|.||.|||||||.|
Sbjct 1 -----------------ATGGGCGTAGTCCATCGGGACCTAAAGCCTGAGAATTTGCTTTTAGCTAGCAAGTCC 57
Query 445 AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG 518
|||||.||.||.|||||||||||||||||||||.||||.||.||.||.||.||.||||||||||||||||||||
Sbjct 58 AAAGGAGCAGCTGTGAAGCTGGCAGACTTCGGCTTAGCCATAGAAGTTCAAGGCGACCAGCAGGCATGGTTTGG 131
Query 519 TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT 592
|||.|||||||||||.||.||.||.||.||.||.|||||.||.|||||..|.|||||.||.||.|||||.||.|
Sbjct 132 TTTTGCTGGCACACCTGGGTATCTTTCTCCAGAAGTCCTGCGTAAAGATCCTTATGGAAAACCAGTGGATATGT 205
Query 593 GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG 666
|||||||.||.||.|||||.||||||.||||.|||||.|||||||||||||||||.||.||.|||||.|..|||
Sbjct 206 GGGCATGCGGTGTCATCCTCTACATCTTGCTGGTGGGATACCCACCCTTCTGGGATGAAGATCAGCATAGACTG 279
Query 667 TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA 740
||.||||||||||||||.||.||.||.||.||.|||||.||.||.|||||.||.||.||.||||||||||||.|
Sbjct 280 TATCAGCAGATCAAGGCCGGAGCTTACGATTTTCCGTCACCAGAATGGGATACAGTGACACCTGAAGCCAAAGA 353
Query 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG 814
||||||||||.|.|||||||||||||||||||||||.||.|||||||||..||||||||||||.|||||.|||.
Sbjct 354 CCTCATCAACAAAATGCTGACCATCAACCCTGCCAAACGTATCACAGCCTCTGAGGCCCTGAAACACCCATGGA 427
Query 815 TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC 888
||||.||||||||.||.||.||.||||||||||||||.|||||||||||.||.||..||||.||.||.|||||.
Sbjct 428 TCTGTCAACGCTCTACTGTTGCCTCCATGATGCACAGGCAGGAGACTGTAGACTGCTTGAAGAAATTTAATGCT 501
Query 889 AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTACT 962
||..|.||.||.|||||.||||||.|.||.||.||||||||.||..|.|||||.||||||||||||||||||.|
Sbjct 502 AGACGGAAACTGAAGGGCGCCATCTTGACAACTATGCTGGCTACGAGAAATTTTTCAGCAGCCAAGAGTTTATT 575
Query 963 CAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAAG 1036
.||||||.|||||||.||.||
Sbjct 576 ---GAAGAAACCAGATGGGGTAAA-------------------------------------------------- 596
Query 1037 GGACGCTTCCTCCTGCCGCCCTGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCC 1110
||||||..||||.||..|.||.||||||||.|||||||||||||..|||||.
Sbjct 597 ----------------------GGAGTCAACTGAGAGCTCAAACACCACCATTGAGGATGAAGACGTGAAAGCA 648
Query 1111 CGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGC 1184
||.||.|||||||||||.||...|||.|||||.||.||.||.||..|||||||.||.|||||||||||.|||.|
Sbjct 649 CGAAAACAGGAGATCATCAAAGTCACTGAGCAACTGATTGAAGCTATCAACAATGGGGACTTTGAGGCTTACAC 722
Query 1185 GAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCC 1258
.|||||||||||.|||||.||.||..|.|||||.|||||||||.||||||||.|.||.||||||||||||||.|
Sbjct 723 AAAAATCTGTGATCCAGGCCTCACTGCCTTTGAACCTGAAGCATTGGGCAACTTAGTGGAAGGGATGGACTTTC 796
Query 1259 ACAGATTCTACTTCGAGAACCTGC--TGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACG 1330
|||||||||||||.||.|| ||| ||.||||.|.||..||.||.||||||||||.||||||.||||||||||
Sbjct 797 ACAGATTCTACTTTGAAAA--TGCTTTGTCCAAAAGCAATAAACCAATCCACACGATCATCCTCAACCCACACG 868
Query 1331 TGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGG--GCAGG--G 1400
|.|||.|..|.||.||.||.||.|||||||||||.|||||.||||||||.||||||||.||||| ||.|| |
Sbjct 869 TTCACCTGGTAGGGGATGACGCAGCCTGCATCGCATACATTCGGCTCACACAGTACATGGACGGAAGCGGGATG 942
Query 1401 CC---GGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCCCCGC-------------TGCAG------- 1451
|| | ||||..|||||.||.|||||.||||||||||.|||| .||||
Sbjct 943 CCAAAG-------ACCATGCAGTCAGAAGAGACGCGCGTGTGGCACCGCCGTGATGGGAAGTGGCAGAATGTTC 1009
Query 1452 -------------------------------------------------------------------------- 1451
Sbjct 1010 ACTTTCACCGTTCGGGGTCCCCCACAGTACCCATCAAGCCACCCTGTATTCCAAATGGGAAAGAGAACTTCTCA 1083
Query 1452 --------------------------- 1451
Sbjct 1084 GGAGGCACCTCTTTGTGGCAAAACATC 1110