Nucleotide Global Alignment

Description

• Query: TRCN0000468031
• Subject: XM_006514467.2
• Aligned Length: 1926
• Identities: 1336
• Gaps: 475

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            ||||||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct    1  ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATTGGCAAGGGGGCTTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC  148
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||||
Sbjct   75  CTCTGTGGTCCGACGCTGTGTCAAGCTCTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAAGC  148

Query  149  TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG  222
            ||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||||||||.||.
Sbjct  149  TGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTGTA  222

Query  223  CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT  296
            ||.|||||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT  296

Query  297  TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG  370
            |||||||||.|||||.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||.||.|
Sbjct  297  TGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGCTG  370

Query  371  TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC  444
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct  371  TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAATGC  444

Query  445  AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG  518
            |||||.||.||||||||||||||||||||||||||.||.||||||||.|||||.||||||||||||||||||||
Sbjct  445  AAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTTGG  518

Query  519  TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT  592
            .||.||.||.||.||||||||||||||.||.|||||||||||.||.|||||.||.|||||.|||||||||||||
Sbjct  519  ATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACATCT  592

Query  593  GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG  666
            ||||||||||||||||||||||.||||||||.||||||||||||||.||||||||.||||||||.|||||||||
Sbjct  593  GGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGCTG  666

Query  667  TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA  740
            ||||||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.|||||||||||||||||
Sbjct  667  TACCAGCAGATCAAGGCTGGGGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAAAAA  740

Query  741  CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG  814
            |||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||
Sbjct  741  CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGCCCATGAGGCCCTGAAGCACCCATGGG  814

Query  815  TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC  888
            ||||||||||.|||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||.
Sbjct  815  TCTGCCAACGTTCCACCGTGGCCTCTATGATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTCAATGCA  888

Query  889  AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTACT  962
            |||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTACT  962

Query  963  CAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAAG  1036
            |||||||||||||||||||||||||||||||||.||.||||||||||||||..|.|||..||||||||||||||
Sbjct  963  CAACAAGAAAGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGCCCCAAAG  1036

Query 1037  GGACGCTTCCTCCTGCCGCCCTGGAG---------------------------------------------TCT  1065
            |..|.||.||||||||.|||||||||                                             |||
Sbjct 1037  GATCTCTCCCTCCTGCTGCCCTGGAGCCTCAAACCACCGTTATCCATAACCCAGTGGACGGGATTAAGGAATCT  1110

Query 1066  TCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAG-------------------------------  1108
            ||.|||||..||||.||.|||||||||||||||||.||.||||                               
Sbjct 1111  TCCGACAGCACCAACACAACCATAGAGGATGAAGATGCCAAAGCCCCCAGGGTCCCTGATGTCCTGAGCTTGGT  1184

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1185  GAGGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCCCCTCTCCTGCCAATCTCCAGTTCCCATTAGCCCCCTTC  1258

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1259  CAACCCCGTCCCCCAGGATCTCTGACATCCTGAACTCAGTGAGAAGGGGCTGTGGAACCCCAGAAGCCGAGGGA  1332

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1333  CCCCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCGGGTCTCCTAGGCCCCCTGCCCACCCCGTCCCCCAGGAT  1406

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1407  CTCTGACATCCTCAACTCAGTGAGGCGGGGCTCAGGGACCCCAGAAGCTGAGGGCCTCCCACCAGTGGGCCCCC  1480

Query 1109  ---------------------------------------------CCCGGAAGCAGGAGATCATTAAGACCACG  1137
                                                         |||||||||||||.|||||.||||||||.
Sbjct 1481  CACCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGCCCACCCCATCCCGGAAGCAGGAAATCATCAAGACCACA  1554

Query 1138  GAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTC  1211
            |||||||||||.||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||
Sbjct 1555  GAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGCCTATGCGAAAATCTGTGACCCAGGCCTGACCTC  1628

Query 1212  GTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG  1285
            .||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1629  ATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGGATTTCCACAGATTCTACTTTGAGAACCTGCTGG  1702

Query 1286  CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGC  1359
            |||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||||||||.||.|||
Sbjct 1703  CCAAGAACAGCAAGCCGATCCACACCACCATCCTGAACCCGCACGTGCACGTCATTGGCGAGGATGCGGCATGC  1776

Query 1360  ATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCG  1433
            |||||.||||||||.|||||.||||||||.||.||.||||||.|.|||||.|||||||||||.||.||||||||
Sbjct 1777  ATCGCCTACATCCGCCTCACACAGTACATCGATGGCCAGGGCAGACCCCGTACCAGCCAGTCCGAAGAGACCCG  1850

Query 1434  CGTGTGGCCCCGCTGC-------AG-------------------------------------------------  1451
            .|||||||.||||.||       ||                                                 
Sbjct 1851  TGTGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTACATTTCCACTGCTCGGGCGCTCCAGTGGCCCCGCTGC  1924

Query 1452  --  1451
              
Sbjct 1925  AG  1926