Nucleotide Global Alignment
Description
- Query:
- TRCN0000468031
- Subject:
- XM_006514470.3
- Aligned Length:
- 1881
- Identities:
- 1332
- Gaps:
- 433
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
||||||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1 ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATTGGCAAGGGGGCTTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||||
Sbjct 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAAGC 148
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||||||||.||.
Sbjct 149 TGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTGTA 222
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
||.|||||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
|||||||||.|||||.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||.||.|
Sbjct 297 TGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGCTG 370
Query 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC 444
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAATGC 444
Query 445 AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG 518
|||||.||.||||||||||||||||||||||||||.||.||||||||.|||||.||||||||||||||||||||
Sbjct 445 AAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTTGG 518
Query 519 TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT 592
.||.||.||.||.||||||||||||||.||.|||||||||||.||.|||||.||.|||||.|||||||||||||
Sbjct 519 ATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACATCT 592
Query 593 GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG 666
||||||||||||||||||||||.||||||||.||||||||||||||.||||||||.||||||||.|||||||||
Sbjct 593 GGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGCTG 666
Query 667 TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA 740
||||||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.|||||||||||||||||
Sbjct 667 TACCAGCAGATCAAGGCTGGGGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAAAAA 740
Query 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG 814
|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||
Sbjct 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGCCCATGAGGCCCTGAAGCACCCATGGG 814
Query 815 TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC 888
||||||||||.|||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||.
Sbjct 815 TCTGCCAACGTTCCACCGTGGCCTCTATGATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTCAATGCA 888
Query 889 AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTACT 962
|||||.||||||||||||||||||||||||||.|||||||||||||||||||||| ||||||||||||||||
Sbjct 889 AGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCT---CAGCCAAGAGTTTACT 959
Query 963 CAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAAG 1036
|||||||||||||||||||||||||||||||||.||.||||||||||||||..|.|||..||||||||||||||
Sbjct 960 CAACAAGAAAGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGCCCCAAAG 1033
Query 1037 GGACGCTTCCTCCTGCCGCCCTGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAG-- 1108
|..|.||.||||||||.||||||||.|||||.|||||..||||.||.|||||||||||||||||.||.||||
Sbjct 1034 GATCTCTCCCTCCTGCTGCCCTGGAATCTTCCGACAGCACCAACACAACCATAGAGGATGAAGATGCCAAAGCC 1107
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1108 CCCAGGGTCCCTGATGTCCTGAGCTTGGTGAGGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCCCCTCTCCTG 1181
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1182 CCAATCTCCAGTTCCCATTAGCCCCCTTCCAACCCCGTCCCCCAGGATCTCTGACATCCTGAACTCAGTGAGAA 1255
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1256 GGGGCTGTGGAACCCCAGAAGCCGAGGGACCCCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCGGGTCTCCTA 1329
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1330 GGCCCCCTGCCCACCCCGTCCCCCAGGATCTCTGACATCCTCAACTCAGTGAGGCGGGGCTCAGGGACCCCAGA 1403
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1404 AGCTGAGGGCCTCCCACCAGTGGGCCCCCCACCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGCCCACCCCAT 1477
Query 1109 CCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTAC 1182
|||||||||||||.|||||.||||||||.|||||||||||.||||||||||||||.||.||||||||||||||.
Sbjct 1478 CCCGGAAGCAGGAAATCATCAAGACCACAGAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGCCTAT 1551
Query 1183 GCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTT 1256
||||||||||||||||||||.||||||||.||||||||||||||.||||||||||||||.|||||||||||.||
Sbjct 1552 GCGAAAATCTGTGACCCAGGCCTGACCTCATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGGATTT 1625
Query 1257 CCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACG 1330
|||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||
Sbjct 1626 CCACAGATTCTACTTTGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACCACCATCCTGAACCCGCACG 1699
Query 1331 TGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGG 1404
|||||||||||||.||||||||.||.||||||||.||||||||.|||||.||||||||.||.||.||||||.|.
Sbjct 1700 TGCACGTCATTGGCGAGGATGCGGCATGCATCGCCTACATCCGCCTCACACAGTACATCGATGGCCAGGGCAGA 1773
Query 1405 CCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCCCCGCTGC-------AG-------------------- 1451
|||||.|||||||||||.||.||||||||.|||||||.||||.|| ||
Sbjct 1774 CCCCGTACCAGCCAGTCCGAAGAGACCCGTGTGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTACATTTCCA 1847
Query 1452 ------------------------------- 1451
Sbjct 1848 CTGCTCGGGCGCTCCAGTGGCCCCGCTGCAG 1878
