Nucleotide Global Alignment
Description
- Query:
- TRCN0000468031
- Subject:
- XM_006518488.2
- Aligned Length:
- 1787
- Identities:
- 1171
- Gaps:
- 359
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||||||||.|..|||||||||||||||||||||||.||||||||.|.||||||..|.||||||||.||.||
Sbjct 1 ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTGCCTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA 143
|||.||||||||..|.|||||.||| .|||.| .||.||.|||||.||.||.||||||||.|||||
Sbjct 75 CTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTAC-----GCAGGAATATGCTGCAAAAATCATCAATACCAA 143
Query 144 GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA 217
||||.||||.|||.|||||||.|||||.||.||..|||||||.|||||.|||||.||||||||.|||.|.||||
Sbjct 144 GAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACATCCAAACA 217
Query 218 TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG 291
|.|||||||||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct 218 TTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGAGGGGAG 291
Query 292 CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA 365
.|.|||||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||
Sbjct 292 TTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGA 365
Query 366 GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC 438
|...|||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.
Sbjct 366 GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGT 438
Query 439 AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG 512
||.|||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
Sbjct 439 AAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG 512
Query 513 GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG 586
|||||||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct 513 GTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG 586
Query 587 ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC 660
||||||||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 587 ACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCAC 660
Query 661 AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC 734
||||||||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||
Sbjct 661 AAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGC 734
Query 735 CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC 808
.||.|||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.|||||||
Sbjct 735 TAAGAACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACC 808
Query 809 CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAG 879
|.||||||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| || |.|||
Sbjct 809 CATGGGTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA-- 879
Query 880 TTCAATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC--------- 944
|||||.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.||
Sbjct 880 TTCAACGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGTTGGCAG 953
Query 945 ------------------------------------------------------AGCAGCCAAGAGTTTACTCA 964
|||.|||||.||..||.|.|
Sbjct 954 GCAGAGCTCCGCCCCCGCCTCGCCTGCCGCGAGCGCCGCCGGCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGA 1027
Query 965 ACAAGAAAGCAGATGG-----------------AGTCAAGCCCCAGACG-------AAT----------AGCAC 1004
|||||||..||||||| ||||.||..|||| || ||| |.||.
Sbjct 1028 ACAAGAAGTCAGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CGTGCACCTAATGCCACAGAGCAACAA 1100
Query 1005 CAAAAACAGTGC-----AGCCGCCACCAGCCCCAAAGGGAC-GCTTCCTCCTG----CCGCCCTGGA------- 1061
|||||||||| | ||| ||||||| |||.|.| ||..||| || |.|||.||||
Sbjct 1101 CAAAAACAGT-CTCGTAAGC-----CCAGCCC--AAGAGCCTGCGCCCT--TGCAGACGGCCATGGAACCACAA 1164
Query 1062 ------GT-----------CTTCTG-----------------ACAG-----TGCCAATACCACCATAGAGGATG 1096
|| ||.|.| |||| || .||.|||||.|.|||.||.|
Sbjct 1165 ACCACCGTGGTACATAATGCTACAGATGGGATCAAGGGCTCCACAGAGAGCTG-TAACACCACTACAGAAGACG 1237
Query 1097 AAGA-------------------CG-----------------------CTAAAG---------CCCGG------ 1113
|||| || ||.||| |||||
Sbjct 1238 AAGATCTCAAAGCTGCCCCACTCCGCACTGGGAATGGCAGCTTGGTGCCTGAAGGACGGAGCCCCCGGGACAGA 1311
Query 1114 ---------------------------------------------------------AAGCAGGAGATCATTAA 1130
||.||.||.||||||||
Sbjct 1312 ACAGCCCCCTCTGCAGGCATGCAGCCCCAGCCTTCTCTCTGCTCCTCAGCCATGAGAAAACAAGAAATCATTAA 1385
Query 1131 GACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGC 1204
||.|||.||.||.||.|||||.|||.|||||||.||.|||||||||||||||.||||.||.||||||||.||.|
Sbjct 1386 GATCACAGAACAACTGATCGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGACCCGGGCC 1459
Query 1205 TGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAAC 1278
|.||.||.||||||||.|||||.||.||.|||||.||.|||||.|||||.|||||.|..||.|||||.|||||.
Sbjct 1460 TCACATCCTTTGAGCCAGAAGCCCTTGGTAACCTCGTGGAAGGAATGGATTTCCATAAGTTTTACTTTGAGAAT 1533
Query 1279 CTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGC 1352
||.|||.||||||||||||||||.||||||||.||||||||.|||||.|||||.|||||.|||||.|||||.||
Sbjct 1534 CTCCTGTCCAAGAACAGCAAGCCTATCCACACCACCATCCTAAACCCTCACGTCCACGTGATTGGGGAGGACGC 1607
Query 1353 CGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGG 1426
.||.||||||||.||.|||||||||||.||||||||.|||||||||||.|||||.||||||||.|||||.||||
Sbjct 1608 AGCTTGCATCGCCTATATCCGGCTCACTCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGTCAGTCAGAGG 1681
Query 1427 AGACCCGCGTGTGGCCCCGCTGCAG------------------------------------------------- 1451
|||||||.|||||||.|||| |.|
Sbjct 1682 AGACCCGGGTGTGGCACCGC--CGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCG 1753
Query 1452 ----------- 1451
Sbjct 1754 CACCGCTACAG 1764
