Nucleotide Global Alignment
Description
- Query:
- TRCN0000468031
- Subject:
- XM_006518500.3
- Aligned Length:
- 1782
- Identities:
- 977
- Gaps:
- 595
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
.|||||.||||||||.|||.|.|||||.||
Sbjct 1 -------------------------------------------ATGCCGACTTCTGAAACATCCAAACATTGT- 30
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
||.||.||.||||||.|.||
Sbjct 31 ------------------------------------------------------GTTACCGGAGGGGAGTTGTT 50
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
|||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.||||||||||||...|
Sbjct 51 TGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGAGAGTG 124
Query 371 TTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG 443
||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.||.||
Sbjct 125 TTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGTAAATG 197
Query 444 CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG 517
|||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.|||||||
Sbjct 198 CAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTG 271
Query 518 GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC 591
||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.||||||||||||
Sbjct 272 GTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGGACATC 345
Query 592 TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT 665
|||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.|||||||||||
Sbjct 346 TGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCACAAGCT 419
Query 666 GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA 739
|||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||.||.|
Sbjct 420 GTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGCTAAGA 493
Query 740 ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG 813
||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.||||||||.|||
Sbjct 494 ACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACCCATGG 567
Query 814 GTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAGTTCAA 884
|||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| || |.||| |||||
Sbjct 568 GTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA--TTCAA 638
Query 885 TGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC-------------- 944
.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.||
Sbjct 639 CGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGTTGGCAGGCAGA 712
Query 945 -------------------------------------------------AGCAGCCAAGAGTTTACTCAACAAG 969
|||.|||||.||..||.|.||||||
Sbjct 713 GCTCCGCCCCCGCCTCGCCTGCCGCGAGCGCCGCCGGCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACAAG 786
Query 970 AAAGCAGATGG-----------------AGTCAAGCCCCAGACG-------AAT----------AGCACCAAAA 1009
||..||||||| ||||.||..|||| || ||| |.||.|||||
Sbjct 787 AAGTCAGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CGTGCACCTAATGCCACAGAGCAACAACAAAA 859
Query 1010 ACAGTGC-----AGCCGCCACCAGCCCCAAAGGGAC-GCTTCCTCCTG----CCGCCCTGGA------------ 1061
||||| | ||| ||||||| |||.|.| ||..||| || |.|||.||||
Sbjct 860 ACAGT-CTCGTAAGC-----CCAGCCC--AAGAGCCTGCGCCCT--TGCAGACGGCCATGGAACCACAAACCAC 923
Query 1062 -GT-----------CTTCTG-----------------ACAG-----TGCCAATACCACCATAGAGGATGAAGA- 1100
|| ||.|.| |||| || .||.|||||.|.|||.||.|||||
Sbjct 924 CGTGGTACATAATGCTACAGATGGGATCAAGGGCTCCACAGAGAGCTG-TAACACCACTACAGAAGACGAAGAT 996
Query 1101 ------------------CG-----------------------CTAAAG---------CCCGG----------- 1113
|| ||.||| |||||
Sbjct 997 CTCAAAGCTGCCCCACTCCGCACTGGGAATGGCAGCTTGGTGCCTGAAGGACGGAGCCCCCGGGACAGAACAGC 1070
Query 1114 ----------------------------------------------------AAGCAGGAGATCATTAAGACCA 1135
||.||.||.||||||||||.||
Sbjct 1071 CCCCTCTGCAGGCATGCAGCCCCAGCCTTCTCTCTGCTCCTCAGCCATGAGAAAACAAGAAATCATTAAGATCA 1144
Query 1136 CGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACC 1209
|.||.||.||.|||||.|||.|||||||.||.|||||||||||||||.||||.||.||||||||.||.||.||.
Sbjct 1145 CAGAACAACTGATCGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGACCCGGGCCTCACA 1218
Query 1210 TCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCT 1283
||.||||||||.|||||.||.||.|||||.||.|||||.|||||.|||||.|..||.|||||.|||||.||.||
Sbjct 1219 TCCTTTGAGCCAGAAGCCCTTGGTAACCTCGTGGAAGGAATGGATTTCCATAAGTTTTACTTTGAGAATCTCCT 1292
Query 1284 GGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCT 1357
|.||||||||||||||||.||||||||.||||||||.|||||.|||||.|||||.|||||.|||||.||.||.|
Sbjct 1293 GTCCAAGAACAGCAAGCCTATCCACACCACCATCCTAAACCCTCACGTCCACGTGATTGGGGAGGACGCAGCTT 1366
Query 1358 GCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACC 1431
|||||||.||.|||||||||||.||||||||.|||||||||||.|||||.||||||||.|||||.|||||||||
Sbjct 1367 GCATCGCCTATATCCGGCTCACTCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGTCAGTCAGAGGAGACC 1440
Query 1432 CGCGTGTGGCCCCGCTGCAG------------------------------------------------------ 1451
||.|||||||.|||| |.|
Sbjct 1441 CGGGTGTGGCACCGC--CGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCG 1512
Query 1452 ------ 1451
Sbjct 1513 CTACAG 1518
