Nucleotide Global Alignment
Description
- Query:
- TRCN0000468031
- Subject:
- XM_011515558.2
- Aligned Length:
- 1868
- Identities:
- 1324
- Gaps:
- 464
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
Query 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC 444
Query 445 AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG 518
Query 519 TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT 592
Query 593 GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG 666
Query 667 TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA 740
Query 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG 814
Query 815 TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC 888
Query 889 AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAG---------------- 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAGACCAC 962
Query 947 --------------------------------------------------------CAGCCAAGAGTTTACTCA 964
.|||||||||||||||||
Sbjct 963 CGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACTCA 1036
Query 965 ACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAAGGG 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAAGGG 1110
Query 1039 ACGCTTCCTCCTGCCGCCCT---------------------------------------------GGAGTCTTC 1067
|||||||||||||||||||| |||||||||
Sbjct 1111 ACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGTCTTC 1184
Query 1068 TGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCGGAAGCAG---------------GAGATCA 1126
|||||||||||||||||||||||||||||||||||||||||||| .||| |||.|||
Sbjct 1185 TGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCC----CCAGGGTCCCCGACATCCTGAGCTCA 1254
Query 1127 TT----AAGACCACGG-------AGCAGCTCATCGAGG---CCGT--------CAACAACGG-TGACTTTGAGG 1177
.| |.|..|.||| ||.||| ||||| ||.| ||.|..||| |..|||| ||.
Sbjct 1255 GTGAGGAGGGGCTCGGGAGCCCCAGAAGC----CGAGGGGCCCCTGCCCTGCCCATCTCCGGCTCCCTTT-AGC 1323
Query 1178 CC-------------TACGCGAAAATCTGTGAC--CCAGGGCTGACCTCGTTTGAG----------------CC 1220
|| |.|.|.|..||||.|||| | ||||.||| |.|||| ||
Sbjct 1324 CCCCTGCCAGCCCCATCCCCCAGGATCTCTGACATC-----CTGAACTC-TGTGAGAAGGGGTTCAGGAACCCC 1391
Query 1221 TGAAGCACTGGGCAACCTGGTTGAAGGG--------ATGGACTTCCACAGATTCTACTTCGAGAACC----TGC 1282
.|||||...||||..|||....|..||| .| |.||..|.|.|..|||.|| ||..|| |.|
Sbjct 1392 AGAAGCCGAGGGCCCCCTCTCAGCGGGGCCCCCGCCCT-GCCTGTCTCCGGCTCTCCT---AGGCCCCCTGTCC 1461
Query 1283 TGGCCAAGAACAGCAAGCCGATCCACACGA------CCATCCTGAAC----------------------CCACA 1328
| || |||..||.||.|| .|||||||||| ||.||
Sbjct 1462 T--CC------------CCGTCCCCCAGGATCTCTGACATCCTGAACTCTGTGAGGAGGGGCTCAGGGACCCCA 1521
Query 1329 -----CGTG-----CACGTCATTGGAGAGGATGCCG-CCTGC------------ATCGCTTACATCCGGCTCAC 1379
||.| |.||.||.||| ||...||| ||||| |||.||..|..||.||.|||
Sbjct 1522 GAAGCCGAGGGCCCCTCGCCAGTGG---GGCCCCCGCCCTGCCCATCTCCGACTATCCCTGGCCCCCTGCCCAC 1592
Query 1380 GCAGTACATTGACGG--------GCAGGGC--CGGC--CCCGCACCAGCCAGTCTGAGGAGACCCGC------- 1434
.| |||.||.|| .|||||| |.|| |||.|||| |.||.||||||.| |
Sbjct 1593 CC----CATGGATGGATGACATCCCAGGGCTGCTGCCACCCCCACC------TGTGGGGAGACAC-CAGACTGG 1655
Query 1435 -----GTGTGG-----CCC----------CGCTGCAG------------------------------------- 1451
|||||| |.| .|||||.|
Sbjct 1656 GGGTGGTGTGGAGATACTCTTAGAGAAGAGGCTGCTGGGCCACGGGCTCGGCATGGCAGGGCAGTGGCTAGCAG 1729
Query 1452 -------------------------------------------------------------------------- 1451
Sbjct 1730 CTCATCTGATTTTAAGGGGCTTGCTGCCCTTGCAGAAGTGGAGGGGTGTGCCCAAAGGAGCCTGCCTGGAAGGT 1803
Query 1452 ------------------ 1451
Sbjct 1804 CACCCCATCAGGTTGGCA 1821
