Nucleotide Global Alignment

Description

• Query: TRCN0000468031
• Subject: XM_017016730.1
• Aligned Length: 1565
• Identities: 1176
• Gaps: 134

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||||||||.|..|||||||||||.|||||||||||.||||||||||.||||||..||||||||||.|||||
Sbjct    1  ATGGCCACCACCGCCACCTGCACCCGTTTCACCGACGACTACCAGCTCTTCGAGGAGCTTGGCAAGGGTGCTTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA  143
            ||||||||||||..|.|||||.|||     |||  |||   .||.|||||.|||||.||.||||||||.|||||
Sbjct   75  CTCTGTGGTCCGCAGGTGTGTGAAGAAAACCTC--CAC---GCAGGAGTACGCAGCAAAAATCATCAATACCAA  143

Query  144  GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA  217
            ||||.||||.|||.|.|||||||||||.||.||..|.|||||||||||.||.||.||||||||.|||.|.||||
Sbjct  144  GAAGTTGTCTGCCCGGGATCACCAGAAACTAGAACGTGAGGCTCGGATATGTCGACTTCTGAAACATCCAAACA  217

Query  218  TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG  291
            |||||||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct  218  TCGTGCGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGGGAG  291

Query  292  CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA  365
            ||.|||||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.|||||
Sbjct  292  CTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGA  365

Query  366  GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC  438
            |...|||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.
Sbjct  366  GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGT  438

Query  439  AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG  512
            ||.|||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||
Sbjct  439  AAATGCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG  512

Query  513  GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG  586
            |||||||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct  513  GTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG  586

Query  587  ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC  660
            |.||||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||
Sbjct  587  ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCAC  660

Query  661  AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC  734
            ||||||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.|||||||||||
Sbjct  661  AAGCTGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGC  734

Query  735  CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC  808
            |||.|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||
Sbjct  735  CAAGAACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACC  808

Query  809  CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC  882
            ||||||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||
Sbjct  809  CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTC  882

Query  883  AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAG  956
            ||||||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||||.|||||.||
Sbjct  883  AATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGCTGCCAAAAG  956

Query  957  TTTACTCAACAAGAAAGCAGATGG-----------------AGTCAAGCCCCAGACG-------AAT-------  999
            ..||.|.||||||||..|.|||||                 ||||.||..|||| ||       |||       
Sbjct  957  CCTATTGAACAAGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CGTGCACCTAATGCCACAG  1029

Query 1000  ---AGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAA-------GGGACGCTTC-CTCCTGCCGCCCTGGA-  1061
               |.||.||||||||||        |.|.||||.||||       ||.||.|..| ||.|.|..|    ||| 
Sbjct 1030  AGCAACAACAAAAACAGT--------CTCGAGCCACAAACCACTGTGGTACACAACGCTACAGATG----GGAT  1091

Query 1062  ----GTCTTCTGACAGTGC--CAATACCACCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGATCATT  1128
                |.||.|..|.||.||  |||.|||||||.|||.|||||.||| || ||||..||.||.||||||||||||
Sbjct 1092  CAAGGGCTCCACAGAGAGCTGCAACACCACCACAGAAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGATCATT  1164

Query 1129  AAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGG  1202
            ||||..||.||.|||||.||.||.|||.|||||||.||.|||||||||||||||.||||.||.|||||.|||||
Sbjct 1165  AAGATTACAGAACAGCTGATTGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGG  1238

Query 1203  GCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGA  1276
            .||.||.||.|||||||||||.||.||.||.|||||.||.||.||||||||.|||||.|..||.|||||.||||
Sbjct 1239  CCTCACTTCCTTTGAGCCTGAGGCCCTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGA  1312

Query 1277  ACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGAT  1350
            |.||.|||.||||||||||||||||.|||||.||.||||||||.|||||||||||.|||||.|||||.|||||.
Sbjct 1313  ATCTCCTGTCCAAGAACAGCAAGCCTATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGAC  1386

Query 1351  GCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGA  1424
            ||.||.||||||||.||||||||.|||||.||||||||.|||||||||||.|||||.||||||||||||||.||
Sbjct 1387  GCAGCGTGCATCGCCTACATCCGCCTCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGA  1460

Query 1425  GGAGACCCGCGTGTGGCCCCG---------------------------------CTG--CAG------------  1451
            .||||||||.||.||||.|||                                 |||  |||            
Sbjct 1461  AGAGACCCGGGTCTGGCACCGTCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCG  1534

Query 1452  -----------  1451
                       
Sbjct 1535  CACCGCTGCAG  1545