Nucleotide Global Alignment
Description
- Query:
- TRCN0000468031
- Subject:
- XM_017314241.1
- Aligned Length:
- 2006
- Identities:
- 871
- Gaps:
- 1043
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCA--GATCCTGGAGGC 368
||..|||| |||| .|||||
Sbjct 1 ----------------------------------------------------ATGGAGCAGGGATC--AGAGGC 20
Query 369 CGTTCTCCATTGT--CACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAA 440
||| |||| ||.| |.||| ||.|..|||| ||
Sbjct 21 CGT------TTGTGCCATC----------CTTCC----------CATGGTGGAG-----------GG------- 50
Query 441 GTGCAAAGGGGCTGCAGTGAAG-CTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGG 513
|.|||||||| .||.|||.| |||.| ||| |||||.|| |||| |.
Sbjct 51 GCGCAAAGGG---ACACTGAGGACTGAC---------CCT---------------GGGGGCCC--CAGG---GC 92
Query 514 TTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGA 587
|.||.| ||.|||| ||||| .||| |
Sbjct 93 TATGCT-------GCTCACC----------TCCCC----ATCC------------------------------A 115
Query 588 CATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACA 661
|| ||||||||||||||.||||||||.||||||||||||||.||||||||.||||||||.||||
Sbjct 116 CA-----------GGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACA 178
Query 662 AGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCC 735
|||||||||||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.||||||||||||
Sbjct 179 AGCTGTACCAGCAGATCAAGGCTGGGGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCC 252
Query 736 AAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCC 809
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 253 AAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGCCCATGAGGCCCTGAAGCACCC 326
Query 810 GTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCA 883
.||||||||||||||.|||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||
Sbjct 327 ATGGGTCTGCCAACGTTCCACCGTGGCCTCTATGATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTCA 400
Query 884 ATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC------------- 944
||||.|||||.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 401 ATGCAAGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAG 474
Query 945 --------------------------------------------------------------AGCAGCCAAGAG 956
||||||||||||
Sbjct 475 ACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCAGCCAAGAG 548
Query 957 TTTACTCAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCC 1030
|||||||||||||||||||||||||||||||||||||||.||.||||||||||||||..|.|||..||||||||
Sbjct 549 TTTACTCAACAAGAAAGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGCC 622
Query 1031 CCAAAGGGACGCTTCCTCCTGCCGCCCTGGAG------------------------------------------ 1062
|||||||..|.||.||||||||.|||||||||
Sbjct 623 CCAAAGGATCTCTCCCTCCTGCTGCCCTGGAGCCTCAAACCACCGTTATCCATAACCCAGTGGACGGGATTAAG 696
Query 1063 ---TCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAG------------------------- 1108
|||||.|||||..||||.||.|||||||||||||||||.||.||||
Sbjct 697 GAATCTTCCGACAGCACCAACACAACCATAGAGGATGAAGATGCCAAAGCCCCCAGGGTCCCTGATGTCCTGAG 770
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 771 CTTGGTGAGGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCCCCTCTCCTGCCAATCTCCAGTTCCCATTAGCC 844
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 845 CCCTTCCAACCCCGTCCCCCAGGATCTCTGACATCCTGAACTCAGTGAGAAGGGGCTGTGGAACCCCAGAAGCC 918
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 919 GAGGGACCCCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCGGGTCTCCTAGGCCCCCTGCCCACCCCGTCCCC 992
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 993 CAGGATCTCTGACATCCTCAACTCAGTGAGGCGGGGCTCAGGGACCCCAGAAGCTGAGGGCCTCCCACCAGTGG 1066
Query 1109 ---------------------------------------------------CCCGGAAGCAGGAGATCATTAAG 1131
|||||||||||||.|||||.|||
Sbjct 1067 GCCCCCCACCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGCCCACCCCATCCCGGAAGCAGGAAATCATCAAG 1140
Query 1132 ACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCT 1205
|||||.|||||||||||.||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||
Sbjct 1141 ACCACAGAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGCCTATGCGAAAATCTGTGACCCAGGCCT 1214
Query 1206 GACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACC 1279
||||||.||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||.|||||||
Sbjct 1215 GACCTCATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGGATTTCCACAGATTCTACTTTGAGAACC 1288
Query 1280 TGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCC 1353
|||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||||||||.
Sbjct 1289 TGCTGGCCAAGAACAGCAAGCCGATCCACACCACCATCCTGAACCCGCACGTGCACGTCATTGGCGAGGATGCG 1362
Query 1354 GCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGA 1427
||.||||||||.||||||||.|||||.||||||||.||.||.||||||.|.|||||.|||||||||||.||.||
Sbjct 1363 GCATGCATCGCCTACATCCGCCTCACACAGTACATCGATGGCCAGGGCAGACCCCGTACCAGCCAGTCCGAAGA 1436
Query 1428 GACCCGCGTGTGGCCCCGCTGC-------AG------------------------------------------- 1451
||||||.|||||||.||||.|| ||
Sbjct 1437 GACCCGTGTGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTACATTTCCACTGCTCGGGCGCTCCAGTGGCCC 1510
Query 1452 -------- 1451
Sbjct 1511 CGCTGCAG 1518
