Nucleotide Global Alignment

Description

• Query: TRCN0000468031
• Subject: XM_017315827.1
• Aligned Length: 1564
• Identities: 1143
• Gaps: 159

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||||||||.|..|||||||||||||||||||||||.||||||||.|.||||||..|.||||||||.||.||
Sbjct    1  ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTGCCTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA  143
            |||.||||||||..|.|||||.|||     .|||.|     .||.||.|||||.||.||.||||||||.|||||
Sbjct   75  CTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTAC-----GCAGGAATATGCTGCAAAAATCATCAATACCAA  143

Query  144  GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA  217
            ||||.||||.|||.|||||||.|||||.||.||..|||||||.|||||.|||||.||||||||.|||.|.||||
Sbjct  144  GAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACATCCAAACA  217

Query  218  TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG  291
            |.|||||||||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct  218  TTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGAGGGGAG  291

Query  292  CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA  365
            .|.|||||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||
Sbjct  292  TTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGA  365

Query  366  GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC  438
            |...|||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.
Sbjct  366  GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGT  438

Query  439  AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG  512
            ||.|||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
Sbjct  439  AAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG  512

Query  513  GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG  586
            |||||||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct  513  GTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG  586

Query  587  ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC  660
            ||||||||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.||||||
Sbjct  587  ACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCAC  660

Query  661  AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC  734
            ||||||||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||
Sbjct  661  AAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGC  734

Query  735  CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC  808
            .||.|||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.|||||||
Sbjct  735  TAAGAACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACC  808

Query  809  CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAG  879
            |.||||||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| ||   |.|||  
Sbjct  809  CATGGGTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA--  879

Query  880  TTCAATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAA  953
            |||||.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.|||||.|||||
Sbjct  880  TTCAACGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGCTGCCAA  953

Query  954  GAGTTTACTCAACAAGAAAGCAGATGG-----------------AGTCAAGCCCCAGACG-------AATAGCA  1003
            .||..||.|.||||||||..|||||||                 ||||.||..|||| ||       |||.|.|
Sbjct  954  AAGCCTATTGAACAAGAAGTCAGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CGTGCACCTAATGGAA  1026

Query 1004  CCAAAA---ACAGTG-------------CAGCCGCCACCA---GCCCCAAAGGGACGCTTCCTCCTGCCGCCCT  1058
            |||.||   ||.|||             |||..|..|.||   ||.|||.||.|| |||               
Sbjct 1027  CCACAAACCACCGTGGTACATAATGCTACAGATGGGATCAAGGGCTCCACAGAGA-GCT---------------  1084

Query 1059  GGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGATCATTAAG  1131
               ||              ||.|||||.|.|||.||.||||| .|| ||||...|.||.||.||.|||||||||
Sbjct 1085  ---GT--------------AACACCACTACAGAAGACGAAGA-TCTCAAAGTGAGAAAACAAGAAATCATTAAG  1140

Query 1132  ACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCT  1205
            |.|||.||.||.||.|||||.|||.|||||||.||.|||||||||||||||.||||.||.||||||||.||.||
Sbjct 1141  ATCACAGAACAACTGATCGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGACCCGGGCCT  1214

Query 1206  GACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACC  1279
            .||.||.||||||||.|||||.||.||.|||||.||.|||||.|||||.|||||.|..||.|||||.|||||.|
Sbjct 1215  CACATCCTTTGAGCCAGAAGCCCTTGGTAACCTCGTGGAAGGAATGGATTTCCATAAGTTTTACTTTGAGAATC  1288

Query 1280  TGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCC  1353
            |.|||.||||||||||||||||.||||||||.||||||||.|||||.|||||.|||||.|||||.|||||.||.
Sbjct 1289  TCCTGTCCAAGAACAGCAAGCCTATCCACACCACCATCCTAAACCCTCACGTCCACGTGATTGGGGAGGACGCA  1362

Query 1354  GCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGA  1427
            ||.||||||||.||.|||||||||||.||||||||.|||||||||||.|||||.||||||||.|||||.|||||
Sbjct 1363  GCTTGCATCGCCTATATCCGGCTCACTCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGTCAGTCAGAGGA  1436

Query 1428  GACCCGCGTGTGGCCCCGCTGCAG--------------------------------------------------  1451
            ||||||.|||||||.||||  |.|                                                  
Sbjct 1437  GACCCGGGTGTGGCACCGC--CGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGC  1508

Query 1452  ----------  1451
                      
Sbjct 1509  ACCGCTACAG  1518