Nucleotide Global Alignment

Description

Query:
TRCN0000468048
Subject:
NM_177091.5
Aligned Length:
2212
Identities:
1271
Gaps:
713

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGGAAGACCTGAGAAGTGTTTTTCTTTGATTAGATTCACTCTCCTCTGTCTGAAAATGGTTATTTCATC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAAAACAGCTCCTGAAATACCAACTATTGATCAGGCCTATTCAAAAATCAGCAATAGTATCACCGTAGAATGGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTACCGTGCCAGGGGCCACAAGTTACTTGCTCACAGCTGAAGATGGGAACACAATCATTGAGACCACAGTGGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATTCCCCAGGGACGGTGACAGGCCTGAAGGCTGCAACCTTGTACCAAATCACCATCAGATCCATCAGCGCCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGACAAAGCCAGGCATCATCTCCAAAGCAGGCAAAGACAGTGTTGGCTGCCCCAGTTCTGGAGGTTAGCTCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAAGTCCAGACTCAATCCTTGTGAGCTGGGACGCCGTATACATGGCGATCGGATTCTCCGTGTCTGTTATGCGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCAACGGCTTGGGTAGAATTTGGAAAGAGAATACTACAAACACCTCCCTGACCTTCAGCAGTCTGGATGCCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AACTCTCTACACTATAAAGGCCTACGCGTGGAATGCCAATGGAATCCCCGGGGATGACTCCACCCGCAATCAGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAACCAGTCCTCGTGCCCCTGCCAACATTCAAGTCTTCTTTGACAGCGGGGCCCTAAAGGCGTCTGTTTCGTGG  666

Query    1  ---------------------------------ATGGCTTTGAGCGACTCTTCAGAGCTGACCTGCAGTACAAC  41
                                             .||||.|.|||.||.|||||..|||..|.||||||.||.||
Sbjct  667  ACCCCGACAGAAGGAGCGTTCAACTACACTGTGGTGGCATCGAGTGATTCTTCCCAGCGCAGCTGCAGCACCAC  740

Query   42  TTTCAGTTCCTGCACCATCTCTTCCCTCCAGTGTGGAACTGAATACTTGATTTCAGTTTTAGCAAGTAATGATG  115
            |.||||.|||||.|.|||...||||.|.|||||||||||.||.|||.|||||||.||.|.|||||.|||.||||
Sbjct  741  TCTCAGCTCCTGTAGCATTAGTTCCTTGCAGTGTGGAACAGAGTACCTGATTTCTGTCTCAGCAAATAACGATG  814

Query  116  CTGGATCTAGCAAATCATCTTCAGCAATGACCCTGAAAACTGTTGCTTGTGCACCCGGAAGAGTGACGATCCAA  189
            ||||.||.|||||.||.|..||.|||...||||||||.|||||||||||||||||.|||||.||||.||||||.
Sbjct  815  CTGGGTCCAGCAAGTCCTGCTCTGCACCAACCCTGAAGACTGTTGCTTGTGCACCTGGAAGGGTGATGATCCAG  888

Query  190  GAAGATCCCCCTGGCCACCTGTCTGTGGCTTGGTCCAGTGTAGATCTGGGTGACTACTATGTGGTCTTT-GTGA  262
            |||||.||||||||.|||.||||||||||||||||||.|||.||.|||||||||||.||||||| |||| ||||
Sbjct  889  GAAGAGCCCCCTGGTCACTTGTCTGTGGCTTGGTCCAATGTGGAGCTGGGTGACTATTATGTGG-CTTTCGTGA  961

Query  263  AGAGTGATGATGGCTTGGAAGTACACTGCAACACATCTCTCACTCAGTGCAACTTCTTATCTGAGTGTGGCTTC  336
            ||||||||||.||||||||.|||||||||||.||.||.|||||.||||||||||||||.|||||||||||||||
Sbjct  962  AGAGTGATGACGGCTTGGAGGTACACTGCAATACCTCCCTCACCCAGTGCAACTTCTTGTCTGAGTGTGGCTTC  1035

Query  337  ACTTATTTTATTAGTGTTTTTGTCTATAACAAGGCAGGGCAAAGTCCTTTGGGTGACATATTCAATTATACCAC  410
            ||.||.||.||||||||.||||.||||||||||||||||||.||||||.||||.||..||||||||||.||.||
Sbjct 1036  ACGTACTTCATTAGTGTGTTTGCCTATAACAAGGCAGGGCAGAGTCCTCTGGGCGATGTATTCAATTACACTAC  1109

Query  411  AGCTCCCTGTTGTCCTAGTGACATTAACCCCGTGTTGGTGTCCAGTGACAGAGTTGAGATTGTCTGGTCTCCTG  484
            ||||||.||||||||||.||||||||.|||.||||||||||||||||||||.||.||.||||.|||||||||||
Sbjct 1110  AGCTCCGTGTTGTCCTAATGACATTAGCCCAGTGTTGGTGTCCAGTGACAGGGTGGAAATTGCCTGGTCTCCTG  1183

Query  485  TCCGTGGTGCCGAACTGTATGAAACCAAGGCTGTAGATGGGTACAACATGGTTGAGTGCAATGACACTACTCCT  558
            |.||||||||.|||||.||||||||||||||..|||.||||||.|.|||.||.||||||||.|||||..|||||
Sbjct 1184  TGCGTGGTGCTGAACTCTATGAAACCAAGGCCATAGCTGGGTATAGCATTGTGGAGTGCAACGACACCGCTCCT  1257

Query  559  GCGTGCACCCTTTCGGCTCTAGAGTGTGACACCAAGTACAACATCACAGTGTATTCATTCAATGAAGTCCGAGG  632
            ||.|||||.||.||.||..|.||.||||||||||||||||||.|||||||||||||.||||.|||.||||||||
Sbjct 1258  GCTTGCACTCTCTCTGCCTTGGATTGTGACACCAAGTACAACGTCACAGTGTATTCCTTCAGTGAGGTCCGAGG  1331

Query  633  CAGCAATATGTCATGTACTCCCCAGTTCATAACCACAGCTCCTTGCAGTCCTGAAATAAAAAATGTTTCAAGGG  706
            |||||||.|||||||..||.||||.||.||.|||||||||||||||||||||||||||||||||.||||.|.||
Sbjct 1332  CAGCAATCTGTCATGCTCTTCCCACTTTATCACCACAGCTCCTTGCAGTCCTGAAATAAAAAATATTTCGAAGG  1405

Query  707  ATGCATTCTCCATGATTAATGTGCACTGGCGATCCACTAATGATGATGCTACTTACACGGTGACTGCCCAAGGG  780
            ||||||||||||||||.||||||||||||||.||.||||||||.|..||.||||||||||||||.|||||.||.
Sbjct 1406  ATGCATTCTCCATGATCAATGTGCACTGGCGGTCGACTAATGAAGGCGCCACTTACACGGTGACGGCCCAGGGC  1479

Query  781  GAGAAAGGACTGTATCAGTGCAGCAGCACAGGAGAGTCCTGCACCATGCGGGGCTTGCCCTGTGGCTCAGTGTT  854
            .||||.||.||||..||||||||||||||.||.|||.||||||..|||.|||||.|||||||.|||||..||||
Sbjct 1480  AAGAAGGGGCTGTTCCAGTGCAGCAGCACCGGGGAGACCTGCAGGATGGGGGGCCTGCCCTGCGGCTCCATGTT  1553

Query  855  CTCTGTCACTGCTGTGGCCGAAACACAGGCAGGACGGAGCCTGCCCAGCTACAGTGTGCCCCTGGAAACAGTGC  928
            |||||||||||||||||||||.||.|||||.|||..||||||||||||||||||.|||||||||||||||||||
Sbjct 1554  CTCTGTCACTGCTGTGGCCGAGACTCAGGCGGGAAAGAGCCTGCCCAGCTACAGCGTGCCCCTGGAAACAGTGC  1627

Query  929  CATGCTGTCCAACCGGTCTGACAGTAACTCAAATCACCCAGTCAGTAATCAACGTGAGCTGGACTATTGGGAGA  1002
            |.|||||||||.|.||||||||||.|.||||..||||||||||..||||||||||||||||||||..||||..|
Sbjct 1628  CCTGCTGTCCAGCTGGTCTGACAGCAGCTCAGGTCACCCAGTCTATAATCAACGTGAGCTGGACTGCTGGGGCA  1701

Query 1003  GTGGCTCAAACCCATGTTGCAGTTCTGGAGTCACACACTGGACAGTCTAAGTGTCACACTCATCAAAACCACTG  1076
            ||||||||||||.|||.||||||.|||||||||.|||..||||||||||||||||||||.||||||||||||||
Sbjct 1702  GTGGCTCAAACCTATGCTGCAGTGCTGGAGTCATACATCGGACAGTCTAAGTGTCACACCCATCAAAACCACTG  1775

Query 1077  CCTCCTAGGGTGCATCACATGTGGCATCAATTACACAGTGACATTAAAAGCAATTAGTGCCACCGGGTTGACTG  1150
            |||.||.||.||||||||||||||||||||.|||||.|||.|.||||||||.||||||.||||.||..||||||
Sbjct 1776  CCTTCTGGGATGCATCACATGTGGCATCAACTACACGGTGGCGTTAAAAGCCATTAGTTCCACGGGACTGACTG  1849

Query 1151  CAGATTGCTCCTACCAAAGTTATTTCTCTGGTGCCTGCTGCCCTTTGGGGGTGAAATTATATAGGCTGGGCCCT  1224
            |||||||..||||.||||||||.|..|||.|||.|||.|||||..|||||||.|||||||||||||||||||||
Sbjct 1850  CAGATTGTGCCTATCAAAGTTACTCTTCTAGTGTCTGTTGCCCACTGGGGGTCAAATTATATAGGCTGGGCCCT  1923

Query 1225  AATGGCATCCGGATCTACTGGCAAGCCTCCAGGGGCTCTGCCAATTACAGCACTGACCTCTATGGCTCCAAAGG  1298
            ||||||||||||||||||||||.|||||||||||||.||||||||||.|||||.|||||||||||.||||||||
Sbjct 1924  AATGGCATCCGGATCTACTGGCGAGCCTCCAGGGGCGCTGCCAATTATAGCACCGACCTCTATGGTTCCAAAGG  1997

Query 1299  CATTTTCACGTGCACCCCGAGTGCTGGCCTCAGTTTCTGTGATGTCACTGAGATACCCTGTGGGGATGTATACA  1372
            |||.||.||.||..||||...|||.||.||.|||||||||||..||||..|.||.|||||||||||.||.||||
Sbjct 1998  CATCTTTACATGTGCCCCACATGCCGGTCTAAGTTTCTGTGACATCACCAACATCCCCTGTGGGGACGTTTACA  2071

Query 1373  CTGTGATGGTCTCACCAGTTGCTAAAACAGGATTGAAGCTTACTTTCTGTCCAAAAAAAATATATTCAGTAACT  1446
            |.|||||||||||||||||||||.||||||||.||||||||||||||||.||||||||||||||.|||||.||.
Sbjct 2072  CCGTGATGGTCTCACCAGTTGCTGAAACAGGACTGAAGCTTACTTTCTGCCCAAAAAAAATATACTCAGTTACC  2145

Query 1447  TGCTCTGGAAGTACACTTGGAATGGTGATTTATAGAGGGAAGAGAAATGAAGAA------------  1500
            ||.|||||.|||||.|||||||||||||||||.|||||||||||.||.||...|            
Sbjct 2146  TGTTCTGGCAGTACTCTTGGAATGGTGATTTACAGAGGGAAGAGGAACGATACAGCGAGCCCCAGG  2211

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.