Nucleotide Global Alignment
Description
- Query:
- TRCN0000468049
- Subject:
- XR_001748744.2
- Aligned Length:
- 2910
- Identities:
- 1414
- Gaps:
- 1496
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGAAGAGGGGGGCTGCTAAATGCAACATCTTCAGGCCATTACAACGTGCGATATGAATTTTTTTTTTGCTGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCTCTGTGAAGCTCAGAACGAGGACATGAGTCAAGAAGAGTTTTCTTTCTAGGTCAATAGGAGGAACTGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCTGGGCAAGGAGTGGAAGCCAACAGGAGCAAAAGTAATTGGGGCCTCCTATGGAGGAACTCTGCCAAAAGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGTTGCTTGGATTTGCCATCTCAGGAATGGAAGAAGGGGGCGGAGACCCTTTGGGGCTTTTGTGCCCAGTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGCCCGAAAAGCTCGCACTTTACAGAGGCGGCAAGACTAGGGTGGAGGAAAGCTCAAGGGCCATCGCTGGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTTCGGTGGCGGGCAGAAACGGGACTGGCAGTGCCCACACGTGTGCGTTCTCCCCGTCCGCCCGAAGGAGCTA 444
Query 1 -------------------------------------------ATGGCTGACTCAGAAGCACTCCCCTCCCTTG 31
|||||||||||||||||||||||||||||||
Sbjct 445 CCTGTGCACCCTGCCTCCGGCTCTCCTGAGCAGAGAGATCCTGATGGCTGACTCAGAAGCACTCCCCTCCCTTG 518
Query 32 CTGGGGACCCAGTGGCTGTGGAAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAA 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGGGGACCCAGTGGCTGTGGAAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAA 592
Query 106 GGAACCAGTGTCTCCCAGAAGGTCTGTGAGTGGAAGGAGCCTGAGGAGCTGAAGCAGCTGCTGGATTTGGAGCT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAACCAGTGTCTCCCAGAAGGTCTGTGAGTGGAAGGAGCCTGAGGAGCTGAAGCAGCTGCTGGATTTGGAGCT 666
Query 180 GCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTGTCGGGCTGTGATTCGCTACAGTGTCAAGACTG 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTGTCGGGCTGTGATTCGCTACAGTGTCAAGACTG 740
Query 254 GTCACCCTCGGTTCTTCAACCAGCTCTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCGCATTATCACTGAG 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCACCCTCGGTTCTTCAACCAGCTCTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCGCATTATCACTGAG 814
Query 328 AGCCTCAACACCAGCCAGTACACATATGAAATCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGCTGAGGAA 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCCTCAACACCAGCCAGTACACATATGAAATCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGCTGAGGAA 888
Query 402 ACTGCGGGCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTGGCTCCATCTCCAACATGTATG 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACTGCGGGCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTGGCTCCATCTCCAACATGTATG 962
Query 476 CTGTAAATCTGGCCCGCTATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGGCC 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGTAAATCTGGCCCGCTATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGGCC 1036
Query 550 CTATTCACATCGAAGGAG-----------------------------------------------------TGT 570
|||||||||||||||||| |||
Sbjct 1037 CTATTCACATCGAAGGAGGTGGGGAAGAGGCACAGGCCCAACCCTGGGCTCCTGATTCTAATCTCCAGCCATGT 1110
Query 571 CACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGA 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGA 1184
Query 645 GAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCTGAG---------------- 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCTGAGGTTGACTTTTCACTTT 1258
Query 703 ------------------------GGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCACTGTGCTAGG 752
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTTGAAACTTTTATTTTGGATTCAGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCACCACTGTGCTAGG 1332
Query 753 GGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATGTGGATGCTGCCT 826
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATGTGGAT------- 1399
Query 827 GGGGTGGGAGCGTCCTGCTGTCACAGACACACAGGCATCTCCTGGATGGGATCCAGAGGGCTGACTCTGTGGCC 900
||||||||||||||||
Sbjct 1400 ----------------------------------------------------------GGCTGACTCTGTGGCC 1415
Query 901 TGGAATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCTGCT 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1416 TGGAATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAGGATACCTCGAACCTGCT 1489
Query 975 CAAGCGCTGCCATGGGTCCCAGGCCAGCTACCTTTTCCAGCAGGACAAGTTCTACGATGTGGCTCTGGACACGG 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1490 CAAGCGCTGCCATGGGTCCCAGGCCAGCTACCTTTTCCAGCAGGACAAGTTCTACGATGTGGCTCTGGACACGG 1563
Query 1049 GAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCTCATGTGGAAGGCACAGGGCGAT 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1564 GAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCTCATGTGGAAGGCACAGGGCGAT 1637
Query 1123 CAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGA 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1638 CAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAATGAAGAAGCGGGA 1711
Query 1197 AGGGTTTGAGCTAGTCATGGAGCCTGAGTTTGTCAATGTGTGTTTCTGGTTCGTACCCCCCAGCCTGCGAGGGA 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1712 AGGGTTTGAGCTAGTCATGGAGCCTGAGTTTGTCAATGTGTGTTTCTGGTTCGTACCCCCCAGCCTGCGAGGGA 1785
Query 1271 AGCAGGAGAGTCCAGATTACCACGAAAGGCTGTCAAAGGTGGCCCCCGTGCTCAAGGAGCGCATGGTGAAGGAG 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1786 AGCAGGAGAGTCCAGATTACCACGAAAGGCTGTCAAAGGTGGCCCCCGTGCTCAAGGAGCGCATGGTGAAGGAG 1859
Query 1345 GGCTCCATGATGATTGGCTACCAGCCCCACGGGACCCGGGGCAACTTCTTCCGTGTGGTTGTGGCCAACTCTGC 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 GGCTCCATGATGATTGGCTACCAGCCCCACGGGACCCGGGGCAACTTCTTCCGTGTGGTTGTGGCCAACTCTGC 1933
Query 1419 ACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTG------------- 1479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1934 ACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGGACCTGTGAGCCTTCTCTG 2007
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2008 TCTTGCTGCCGGCCTTGATACCACCCCTCACCCGCAGAGTCACTGCATTCCCTCCCAGCCTTTGAGGCCGGGTG 2081
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2082 CAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACTTGAGGTCAGGAGTTCGAG 2155
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2156 ACCAGCCTGGCCAATAAGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGAGCATGGTGGCCTGTGC 2229
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2230 CTGTAAACCCAGCTACTCAGGAGGTTGGGGCAGAATTGCTTGAACCCAGGGGGCAGAGGTTGCAGTGAGCCGAG 2303
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2304 ATTGCACCCCTGCACTCCAGGCTGGGCAACAGTACGAGACTCTGTTCCAAAAAAAATAAAAAAGAACAGCCTTT 2377
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2378 TTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGACCTACTAACTTTCTCCTAACTAAATATTTGATTTT 2451
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2452 AGGAGAGTGTTTAAATAAATTACAGTATGTCTATATGATGAAATGTTATTTTGCCATTAAAATTTTGTTTACAA 2525
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2526 AGATAATTTTTATTGACATAAAAATAACTTTAATGTAATTTATGTTGAAAAAGCTGAATACAAGTCTTTATATA 2599
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2600 GAGTAATATTTGAGCTGTGTTCAAAAATACATAGGAAAAGACTGATAAAATGAAATATGGCAAAATGTTAATAG 2673
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2674 TTTTCCCTGGAATAGGATAATAGGCAATTTTAAAACAGACTCCTTTAAAAAAACAAACAAACAAAAAAAACATA 2747
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2748 GACTTCTTTATATCTTTTGAGCTCCCTCCCTTTTATTATGTAATGAATATGTGTTGCTTTTGTAATAGGAAAAT 2821
Query 1480 ------------------------ 1479
Sbjct 2822 AATAAAGTTAAAATTTCAACTGCA 2845
