Nucleotide Global Alignment
Description
- Query:
- TRCN0000468200
- Subject:
- NR_161419.1
- Aligned Length:
- 2465
- Identities:
- 1610
- Gaps:
- 794
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCTTACTGCTACAGCAGGGCTGGGGATTGCAGTATCCGCTGTTGCTGCTGCTCCCAGTCCTGCCCCTGCTGCT 74
Query 1 --------------------ATGGCTGAAGCGGCCACG--GGCTTTC----------TGG---------AGCAG 33
||..|.||||.|| |||| |||.||| ||| |||||
Sbjct 75 ACCTAGTCCAGCCTCACCGCATCCCAGAAGAGG-CACGTCGGCCTTCATTTGCCTAGTGGATTTTCAAAAGCAG 147
Query 34 CTC-------------------AAG---TCCTGCAT-------------------------AGTTTG------- 53
||| ||| .|.||||| ||.|.|
Sbjct 148 CTCTTCGGTTTTTGGTGCTGTTAAGAGACCTTGCATTTCAATCACACCGGGAGAAAACTGAAGCTCGTAACAGG 221
Query 54 ---GTCT------TGGACGTATCTGTGGAC-----CGTGTGGTTCTTCAT----CGTGCTAT---TCCTGGTC- 105
.||| |||||..|.|| ||||| .||.||| |||||| |.||||.| .||.|.||
Sbjct 222 AGAATCTGGCAGCTGGACACAGCT-TGGACTGCATTGTCTGG--CTTCATGACCCCTGCTGTGTAGCCGGCTCA 292
Query 106 ------------------TACA---TCCTGCGGGTGCC----------------------------------TT 124
|||| |||| ||..|..| ||
Sbjct 293 TCTCTTCACTCTCACATGTACACTCTCCT-CGCTTTTCTTTCTTTTTTTTTTCCCTTTTCTTTCTTCTAATTTT 365
Query 125 TGAAAATCAAC-------GACAAC-----TTGAGCA---------CAGTGAGCATGTTTTTGAACACATTAACA 177
|.||||.||.| |.||.| ||| ||| ||.||||||||||||||||||||||||||
Sbjct 366 TAAAAAGCAGCCTCTGGAGCCAGCCATGTTTG-GCACTGAATCTTCATTGAGCATGTTTTTGAACACATTAACA 438
Query 178 CCGAAGTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTA 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 CCGAAGTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTA 512
Query 252 TTTTCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTG 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 TTTTCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTG 586
Query 326 ACAACAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGC 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 ACAACAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGC 660
Query 400 AAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGA 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGA 734
Query 474 GCCTCTTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATC 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GCCTCTTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATC 808
Query 548 TGCGTCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCAT 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 TGCGTCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCAT 882
Query 622 GAAGCCTTGGAGATAAATGAAATTAGGTCCAGAGTTGAAGTTCCCCTAATTGCTTCCTCTACCATCTGGGAGAT 695
|||||||||||||||||||
Sbjct 883 GAAGCCTTGGAGATAAATG------------------------------------------------------- 901
Query 696 AAAATTGTTACCAAAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAG 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 --------------AGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAG 961
Query 770 AAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGA 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 AAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGA 1035
Query 844 TCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGC 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGC 1109
Query 918 CAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 CAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTA 1183
Query 992 TGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTA 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 TGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTA 1257
Query 1066 GCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGC 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGC 1331
Query 1140 TGTCTCTGACAA-------------------------------------------------------------- 1151
||||||||||||
Sbjct 1332 TGTCTCTGACAAATCGCCAGTACCTACTGCAACATCTTTTCTCCCTACACAGCGACTCCAGCTTGGGAGGGCAG 1405
Query 1152 -------------------------------------------------------------------------- 1151
Sbjct 1406 GGCCAGGGTTGTCACAGCTTCCCCTGTGGTGTCTGCCTGCCAAGCACAGCTCTGGAGTTAGCCCTGGGTGTGAG 1479
Query 1152 ATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATTCATAGAG 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 ATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATTCATAGAG 1553
Query 1226 CTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATC 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 CTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATC 1627
Query 1300 CTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGGAAGGGGC 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 CTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGGAAGGGGC 1701
Query 1374 TTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGGCACCTAT 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 TTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGGCACCTAT 1775
Query 1448 TTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTCAGTTTAC 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 TTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTCAGTTTAC 1849
Query 1522 CCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCCTCCT 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 CCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCCTCCT 1923
Query 1596 GACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTATGATT------GACATTTTCTGCTCGGC-- 1661
||||||||||||||||||||||||||||||||||||||||||| || .||.||.|.|||.| |
Sbjct 1924 GACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCT----TTCCTCAGCACTTTGTTTGCCC--CCT 1991
Query 1662 -AGAGT---TCAGGGACTGGAATTGCAAGAGTAT--TTTCAT---GCGTGTTG--------AAGA-TGAACTG- 1716
|.|.| |||.||| |.||.|| .||||.|| |..||| |..|||.| ||.| .||.|||
Sbjct 1992 TAAACTTTGTCATGGA--GAAAGTG-GAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATCTGA 2062
Query 1717 GA-AATCCCT------CCGGCACCTCA-------ATTTCAACATTTCC------AAAAC--------------- 1755
|| ||.|||| |...||||||| .|..||.|||.||| ..|||
Sbjct 2063 GAGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCA 2136
Query 1756 -------------------------------------------------------------------------- 1755
Sbjct 2137 AGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAAATGTTCATGGACTATTCCATATTAAAAGC 2210
Query 1756 -------------------------------------------------------------------------- 1755
Sbjct 2211 TGTTTTTGTTGTACAAAATTCACTGATGTTCAGTTCTATTTTATTTTGCCTTCAGAAAAGAAGAAAGTCAAAAA 2284
Query 1756 -------------------------------------------------------------------------- 1755
Sbjct 2285 TAAAACTTTTGTGTATTACAGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAA 2358
Query 1756 ----------------------- 1755
Sbjct 2359 ATAAACCTTTGGATTTACCTTGA 2381
