Nucleotide Global Alignment
Description
- Query:
- TRCN0000468200
- Subject:
- XM_011241075.2
- Aligned Length:
- 1891
- Identities:
- 1133
- Gaps:
- 656
Alignment
Query 1 ATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGAC 74
|||||.||.||||.|.|||||||.|||||||||||||||||||||||.||.|||||.|||||.|||||||||||
Sbjct 1 ATGGCCGAGGCGGGCGCGGGCTTCCTGGAGCAGCTCAAGTCCTGCATCGTGTGGTCGTGGACCTATCTGTGGAC 74
Query 75 CGTGTGGTTCTTCATCGTGCTATTCCTGGTCTACATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA 148
|||||||||||||.|||||||.||||||||||||||||||.|||||||..|||..||||||||||||.||||||
Sbjct 75 CGTGTGGTTCTTCCTCGTGCTCTTCCTGGTCTACATCCTGAGGGTGCCCCTGAGGATCAACGACAACCTGAGCA 148
Query 149 CAGTGAGCATGTTTTTGAACACATTAACACCGAAGTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCA 222
||||||||||||||||||||||.|||||.||.|||||||||||||||||.||||||||||||||.||||||||.
Sbjct 149 CAGTGAGCATGTTTTTGAACACGTTAACCCCAAAGTTCTACGTGGCCCTGACAGGCACTTCCTCGCTAATATCG 222
Query 223 GGGCTTATTTTGATATTTGAATGGTGGTATTTTCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAG 296
||.|||||||||||||||||||||||||||||||||||.||.|||||.||.|||||||||||||||||.|||||
Sbjct 223 GGACTTATTTTGATATTTGAATGGTGGTATTTTCGCAAGTATGGAACATCTTTCATTGAACAAGTCTCCGTAAG 296
Query 297 CCACTTGCGCCCCCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAG 370
|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||||
Sbjct 297 CCACTTGCGCCCCCTTCTGGGAGGGGTTGACAACAACTCTTCCAATAATTCTAATTCCAGTAATGGAGACTCAG 370
Query 371 ATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATAC 444
|||||||.||.||||||||||||||||||||||||||||||||||||||.|||.|.|||||||||||.|||||.
Sbjct 371 ATTCCAACAGACAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCCACTGAATCTGTTTAGGGGTGCGGAATAT 444
Query 445 AATCGGTATACTTGGGTGACAGGACGAGAGCCTCTTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCA 518
||||||||.||||||||.|||||||||||||||||.||.||||||||||||||.|||||||||||.||||||||
Sbjct 445 AATCGGTACACTTGGGTCACAGGACGAGAGCCTCTGACCTACTATGACATGAACCTCTCTGCCCAGGACCACCA 518
Query 519 GACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAA 592
||||||||||||||||||.||.||.|||||.||.||.|||||||||||||||||.|||||.||||||||.||.|
Sbjct 519 GACATTCTTTACTTGTGATTCAGATCATCTTCGCCCTGCAGATGCAATAATGCAAAAAGCTTGGAGAGAAAGGA 592
Query 593 ACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAATGAAATTAGGTCCAGAGTTGAAGTTCCC 666
||||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 593 ACCCTCAAGCCAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAACGAAATTAGGTCCAGAGTTGAAGTTCCC 666
Query 667 CTAATTGCTTCCTCTACCATCTGGGAGATAAAATTGTTACCAAAGTGTGCAACTGCTTATATTCTCTTGGCTGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||
Sbjct 667 CTAATTGCTTCCTCTACCATCTGGGAGATAAAATTGTTACCAAAGTGTGCAACTGCGTACATTCTCTTGGCGGA 740
Query 741 AGAGGAAGCAACAACCATTGCTGAAGCAGAAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACC 814
|||.|||||.|||||.||||||||||||||||||.|.|||||||||||||||||||||||||||||.|||||||
Sbjct 741 AGAAGAAGCGACAACTATTGCTGAAGCAGAAAAACTCTTTAAGCAGGCCCTGAAGGCTGGAGATGGTTGTTACC 814
Query 815 GACGCTCTCAGCAGCTACAACATCATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTG 888
|.||||||||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||||||||.||.
Sbjct 815 GGCGCTCTCAGCAGCTACAACATCATGGGTCCCAGTATGAAGCTCAACACAGACGAGACACCAATGTCTTAGTC 888
Query 889 TACATCAAAAGAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGA 962
||.||||||||||||||.||.|||||||||.|.|||||.||.||||||||.|||||||||||.|||||||||||
Sbjct 889 TATATCAAAAGAAGGCTGGCGATGTGTGCCCGGAGACTTGGAAGGACCAGAGAAGCAGTGAAGATGATGAGAGA 962
Query 963 TTTAATGAAGGAGTTCCCCCTTCTGAGTATGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTAC 1036
|||||||||||||||.|||||.||.||.|||||||||||||||||.||||||.|||||||.|||||||||||.|
Sbjct 963 TTTAATGAAGGAGTTTCCCCTCCTAAGCATGTTCAATATCCATGAGAACCTTCTAGAAGCTCTTCTGGAACTCC 1036
Query 1037 AAGCATATGCTGATGTTCAGGCAGTCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGC 1110
||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||
Sbjct 1037 AAGCTTATGCTGATGTTCAGGCAGTCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCGGCGACAATATGC 1110
Query 1111 TACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAA--------------------------------- 1151
||||||||.||..||||||||||||||||||||||||||||
Sbjct 1111 TACACAGCCGCCCTGCTCAAAGCAAGAGCTGTCTCTGACAAATCGCCAGTACCTACTGCAACATCTTTTCTCCC 1184
Query 1152 -------------------------------------------------------------------------- 1151
Sbjct 1185 TACACAGCGACTCCAGCTTGGGAGGGCAGGGCCAGGGTTGCCACAGCTTCCCCTGTGGTGTCTGCCTGCCAAGC 1258
Query 1152 -----------------------------ATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGA 1196
|||||||||.||||||||.||||||.|||||||||||||||||||
Sbjct 1259 ACAGCTCTGGAGTTAGCCCTGGGTGTGAGATTCTCTCCAGAGGCTGCGTCTCGGAGGGGGCTGAGCACAGCAGA 1332
Query 1197 GATGAATGCAGTAGAGGCCATTCATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGA 1270
|||||||||||||||.|||||.||.||||||||||||||
Sbjct 1333 GATGAATGCAGTAGAAGCCATCCACAGAGCTGTGGAATT----------------------------------- 1371
Query 1271 AAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT 1344
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1345 CTTGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGAT 1418
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1419 CCCTTATCCCTTGGAAAAGGGGCACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGC 1492
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1493 TTCCATCTTTCCATGAAGTCTCAGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTA 1566
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1567 TGTTCCTTCACAGCCATGCTGGCCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTAT 1640
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1641 GATTGACATTTTCTGCTCGGCAGAGTTCAGGGACTGGAATTGCAAGAGTATTTTCATGCGTGTTGAAGATGAAC 1714
Sbjct 1372 -------------------------------------------------------------------------- 1371
Query 1715 TGGAAATCCCTCCGGCACCTCAATTTCAACATTTCCAAAAC 1755
Sbjct 1372 ----------------------------------------- 1371
