Nucleotide Global Alignment
Description
- Query:
- TRCN0000468203
- Subject:
- NR_110210.1
- Aligned Length:
- 4275
- Identities:
- 1371
- Gaps:
- 2901
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTAGTGATGTCATATCCGTTGTCCAGGTCTCCACACCTCTCTCAGCAGTTAATCCCTTTATCTATTCCTTGGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAAACTTTTGAGGTGGGCTAGCTATATAGCAGCGGGGGAGAGGGTAAACTGGGGCGCGCGGGTTGGAGGCGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGCACCGCGGCCAGCGCCCACTGCAGCCCAACCCACTCTCTAGAGCTCCCGGACTCCTAGCTCTGAGAATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCGGAATGATCGCCCCCCAGGGCGGCTGCCGCCGCTGCCGCTGCTGCTGTTATTGCTACTGCTGCTGCCGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCTCTGCTTCCACTCGGCTCTGACTGGCAGGCAGAAAGTGCAACTGACGAGGGAAAGGTCTCTGCAGTGAGTG 370
Query 1 ------------------------------------------------ATGCAGGCGACGTCCAACCTTCTCAA 26
||||||||||||||||||||||||||
Sbjct 371 GAGAGCCTACATAAAAGAGAGTAAAGAGGGGCAAAAACCCAGATCAGAATGCAGGCGACGTCCAACCTTCTCAA 444
Query 27 CCTCCTGCTGCTGTCTTTGTTTGCCGGATTAGATCCTTCCAAG------------------------------- 69
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCTCCTGCTGCTGTCTTTGTTTGCCGGATTAGATCCTTCCAAGGATGGAAGTAAAAAGGCAGGACCTCGAGCAG 518
Query 70 ------------------------------ACTCAGATTAGTCCTAAAGAAGGGTGGCAGGTGTACAGCTCAGC 113
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCACCTTGGATCCCAAAATGAAAGTGTTATACTCAGATTAGTCCTAAAGAAGGGTGGCAGGTGTACAGCTCAGC 592
Query 114 TCAGGATCCTGATGGGCGGTGCATTTGTACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGGGATGCCAAAA 187
|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAGGATCCTGATGGGCGGTGCATTTGCACAGTTGTTGCTCCAGAACAAAACCTGTGTTCCCGGGATGCCAAAA 666
Query 188 GCAGGCAACTTCGCAAACTACTGGAAAAGGTTCAGAACATGTCCCAGTCTATTGAAGTCTTAAACTTGAGAACT 261
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAGGCAACTTCGCCAACTACTGGAAAAGGTTCAGAACATGTCCCAGTCTATTGAAGTCTTAAACTTGAGAACT 740
Query 262 CAGAGAGATTTCCAATATGTTTTAAAAATGGAAACCCAAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATTGA 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGAGAGATTTCCAATATGTTTTAAAAATGGAAACCCAAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATTGA 814
Query 336 AGATGATCGAAAGACACTTATGACCAAGCATTTTCAGGAGTTGAAAGAGAAAATGGACGAGCTCCTGCCTTTGA 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGATGATCGAAAGACACTTATGACCAAGCATTTTCAGGAGTTGAAAGAGAAAATGGACGAGCTCCTGCCTTTGA 888
Query 410 TCCCCGTGCTGGAACAGTACAAAACAGATGCTAAGTTAATCACCCAGTTCAAGGAGGAAATAAGGAATCTGTCT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCCCCGTGCTGGAACAGTACAAAACAGATGCTAAGTTAATCACCCAGTTCAAGGAGGAAATAAGGAATCTGTCT 962
Query 484 GCTGTCCTCACTGGTATTCAGGAGGAAATTGGTGCCTATGACTACGAGGAACTACACCAAAGAGTGCTGAGCTT 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCTGTCCTCACTGGTATTCAGGAGGAAATTGGTGCCTATGACTACGAGGAACTACACCAAAGAGTGCTGAGCTT 1036
Query 558 GGAAACAAGACTTCGTGACTGCATGAAAAAGCTAA--------------------------------------- 592
|||||||||||||||||||||||||||||||||||
Sbjct 1037 GGAAACAAGACTTCGTGACTGCATGAAAAAGCTAATTGATTTAAAAAAGAGAAAAGAAGAAGAAAAAAGGCAAC 1110
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1111 AGAAAGGAGAAGCATAAGCAATAGTATTTTGGGAAGCTATAACACGCGACTTGCCTCCCTGTTCACCTTTGTAT 1184
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1185 TCTCAGCACCTAGAATAGTTCTGGTACAAAATAAGTTCACAGTAAATGGTTGTCAAATGAATAAATTAATTATT 1258
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1259 ATATCTTTAAATAGTAACTATTGTTTTTACCCTCTAACATATTTCAGAGAAATGCTTAGTGCTACAAGAAAGTA 1332
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1333 AAGTTTGCTTTCTAAGGTATGATTGACTGGAGTAAGAATCAATTTTCCTCACAAAACCAGGTACAAAATAAAAG 1406
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1407 AGTCAACTAGCCAAAAGACCACTTTACCATGGTCACCCAATGTTTAGTTTAAGAGCCAGAAGCTTTTAACCTCC 1480
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1481 GGTACAAATTCTGTCCTAAGTTTTGGCCGAAACAACCTAAGACTCAGCAGTATCCCTTTGCCATAGAGATGCAA 1554
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1555 GGCTGGATTAGATTCAAGCACCATCGAAGCCAAAGACACCCCAAGCCAGTGATGTGCTGTGGGTTGTTTGGAAA 1628
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1629 TGTCGATTAGATAAGGCTCATGGTATGATTCAGAGCTCCAAGGACAGTTCTTGTTCAGGTTTCAACTAATCAAC 1702
Query 593 -------------------------------------------------------------------------- 592
Sbjct 1703 ATCGGATTATGCACACCTCAACATCTGAAATATGCAGACATTTGAGACAAATACCAGAATTGTGTCTTCTTGCT 1776
Query 593 --------------------------------CATGTGGCAAACTGATGAAAATCACAGGCCCAGTTACAGTCA 634
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TTGTACAAATCATGCTTCAGTCTGGCAATAAGCATGTGGCAAACTGATGAAAATCACAGGCCCAGTTACAGTCA 1850
Query 635 AGACATCTGGAACCCGATTTGGTGCTTGGATGACAGACCCTTTAGCATCTGAGAAAAACAACAGAGTCTGGTAC 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGACATCTGGAACCCGATTTGGTGCTTGGATGACAGACCCTTTAGCATCTGAGAAAAACAACAGAGTCTGGTAC 1924
Query 709 ATGGACAGTTATACTAACAATAAAATTGTTCGTGAATACAAATCAATTGCAGACTTTGTCAGTGGGGCTGAATC 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATGGACAGTTATACTAACAATAAAATTGTTCGTGAATACAAATCAATTGCAGACTTTGTCAGTGGGGCTGAATC 1998
Query 783 AAGGACATACAACCTTCCTTTCAAGTGGGCAGGAACTAACCATGTTGTCTACAATGGCTCACTCTATTTTAACA 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AAGGACATACAACCTTCCTTTCAAGTGGGCAGGAACTAACCATGTTGTCTACAATGGCTCACTCTATTTTAACA 2072
Query 857 AGTATCAGAGTAATATCATCATCAAATACAGCTTTGATATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTAT 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AGTATCAGAGTAATATCATCATCAAATACAGCTTTGATATGGGGAGAGTGCTTGCCCAACGAAGCCTGGAGTAT 2146
Query 931 GCTGGTTTTCATAATGTTTACCCCTACACATGGGGTGGATTCTCTGACATCGACCTAATGGCTGATGAAATCGG 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GCTGGTTTTCATAATGTTTACCCCTACACATGGGGTGGATTCTCTGACATCGACCTAATGGCTGATGAAATCGG 2220
Query 1005 GCTGTGGGCTGTGTATGCAACTAACCAGAATGCAGGCAATATTGTCATCAGCCAACTTAACCAAGATACCTTGG 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GCTGTGGGCTGTGTATGCAACTAACCAGAATGCAGGCAATATTGTCATCAGCCAACTTAACCAAGATACCTTGG 2294
Query 1079 AGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAAGTGCAGGGGAATCTTTCATGATCTGTGGGACACTG 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAAGTGCAGGGGAATCTTTCATGATCTGTGGGACACTG 2368
Query 1153 TATGTCACCAACTCCCACTTAACTGGAGCCAAGGTGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTA 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TATGTCACCAACTCCCACTTAACTGGAGCCAAGGTGTATTATTCCTATTCCACCAAAACCTCCACATATGAGTA 2442
Query 1227 CACAGACATTCCCTTCCATAACCAATACTTTCACATATCCATGCTTGACTACAATGCAAGAGATCGAGCTCTCT 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CACAGACATTCCCTTCCATAACCAATACTTTCACATATCCATGCTTGACTACAATGCAAGAGATCGAGCTCTCT 2516
Query 1301 GTGCCTGGAACAATGGCCACCAGGTGCTGTTCAATGTCACCCTTTTCCATATCATCAAGACAGAGGATGACACA 1374
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 ATGCCTGGAACAATGGCCACCAGGTGCTGTTCAATGTCACCCTTTTCCATATCATCAAGACAGAGGATGACACA 2590
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2591 TAGGCAAATGTGACATGTTTTCATTGATTTAAACAGTGTGATTTGTGATAAACTCTATAAGACCCCTTCCGTTT 2664
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2665 TTTTCTTCACTATTATTTTTCATCATTTCTCCAAAGCAAAGCATTTTTATTGTAAAGTTGGTGTTTCAAAAACA 2738
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2739 TAGCTGAGCTTGTCTAACTTACCATGTTGGAAACACATCTTAACTTCTAAATTTACAAGGCCTATCATGTCCTT 2812
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2813 GTCATGAAAAGCACTAAAAAAAAAAAGAGTTTAAGTGGCTAAAGTCATAGTTTTGCAAGAGATTAATGATCTGC 2886
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2887 CTTATATTAGAGTCAGAGACTAATGGTGGCTTAAATGCACGAATGTCTTTTTTTTTAAAACTGTCATTTTTTAC 2960
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 2961 TGTCTTTTGCTCCATATCAGGAAATATTTTGGTAGGAATTAGGAGAACAAAAAGCACTTTTATCCCATTTATTT 3034
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3035 CTTTAAAAAATGTAAGGATTTCATTTATATTGAAAAATAATATTAATCATTTTGCTGTTAACACAATTCTCTGA 3108
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3109 TGCGGTGCTGTACAGTCATTTTTAAATCTCTTGCTAACATTTTATTGGCAGTATGTATTTCTACCATTGTAACC 3182
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3183 ACCATTGTGCTATTGTATCTCTTCACTTCTGTGAAAGTAATATTTTTTATAAAATACACTGAAATTTAACCTCA 3256
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3257 GTAATTGAGTCCATTTTCAAGTGTGGTCAAGAATAATCTTCTTGGCTTACCCCTTTACATAAGCATTATAAACT 3330
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3331 AAAATGAAAACCAAACCAGACACCTGACATAGAGTCTTTATTTTACCCCAAGTTTTTTGGGCCACTGACATTGA 3404
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3405 ATGCAACAACTGATTTCATACAACTGAGTTACTCTGTTCACTCCACTGAATGCAACCCATATAGTTTCTTGCAC 3478
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3479 AAGGTGCATCTGGATTCCAAATATTGGATTTGAGTTGACTCTACTCATTTATTATACACTAAAGAAATTTTGTT 3552
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3553 CTTCATAGTTAAATGTACTAGCATTTAATTTATATTTTACATACAACTTGCAATAATGAAATTCCTTATGTCAG 3626
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3627 GACCCTGAAAATAAGCACATTTGAAAACTCTTAGAAAAAAAAAATTCTGTAATGTCCTCTAGATTTAGATTATG 3700
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3701 AGCCCTGAGGAGTTATTGGCAAGATTTGTGCAAAATAAAATATGGGGAGACTTGGGAGTTGTCTTTGTGGTTTC 3774
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3775 AAAAGTGTAAATAACCAATTCAGAAAACAAAATGGAAAAACGACCCCTTGTTACCTTGATTCACTGTATGTGGA 3848
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3849 AAAATAATGTAACCAAAAGGGAAGAGCTTTAATAATACTTATGTTAATAACTCTATGAAACATATAAGCTAACT 3922
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3923 ATATATCAAACATTTCATTGAGTTTGGATGTATTTTCCACATATTAAAAAAATAGTTCCCTAAGGCAGCTTTAT 3996
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 3997 GGAAACTAATATAGGTTGGTTTTACAATTTAAAAAGTATATTCTATAATAAATAATAAAACAAATTGTTTTAAA 4070
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 4071 TGTTTAGTTTCACACATACATAGTACCATGATTTTCTTTGAAAGATAAGGATGTAATGATTTAGATAAAGCATC 4144
Query 1375 -------------------------------------------------------------------------- 1374
Sbjct 4145 ATGTAAAGAAATCCTAACATTTAAGTGTAATTCATTTCAAATGTCACAAGTAAAGCATCATCCTCAAATATCTC 4218
Query 1375 --------------------------------------------------------- 1374
Sbjct 4219 ACTGTCAAAATTGTAGAATTAAATAACCCAATCTTGAAACTGTCAAAAAAAAAAAAA 4275
