Nucleotide Global Alignment

Description

• Query: TRCN0000468300
• Subject: NR_045769.2
• Aligned Length: 4393
• Identities: 626
• Gaps: 3766

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCAGTCCGATCTCGCGAGAGAGGACGGAAGCCTGTGGGAGCCCGTGGCCTTTAAAGTGCCGTTCAGCCTTTTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCCAGGGGTGCTTTGTAAACACGGCTGTGCTCAGGGCTCGCGGGTGACCGAAAGGATCATGAACTAGTGACCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAAAGGGTACTAGATGGAAACTTGAGAAAGGACTGCTTATTGATAACAGCTAAGGTATTCCTGGAAGCAGAGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAATAAAGCTCATGGCCCACCAGCTAGAAAGATTTCCTGAAGAGGTAGTCTGATTGGCTTAACTCGTATTCTTG  296

Query    1  -----------------------------------ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC  39
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCATGAGAAAAAGAATGTGATAAGTTATTCAACTTATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC  370

Query   40  AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAA  113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAA  444

Query  114  CGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTG  187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTG  518

Query  188  TCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG  592

Query  262  TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC  335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC  666

Query  336  CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC  409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC  740

Query  410  CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA  483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA  814

Query  484  GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA  557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA  888

Query  558  GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTG----  627
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.    
Sbjct  889  GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTG  962

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  963  TACCAGGCCCATTTCCTCTTCTGTTACATCTTCCTAATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATT  1036

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1037  ACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCCACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGG  1110

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1111  AATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGTCAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGC  1184

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1185  AACATCCTCCAGTTACCAATGGTGATACTGTCAAAGGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAA  1258

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1259  TCTCGACCGCAGTCATTACAACAGCCAGCCACATCCACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCC  1332

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1333  ACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAGCAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTT  1406

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1407  TAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAA  1480

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1481  GCTGAAGACTTGAGTTCATTAAATGGTCAGCTGCAGTGAATATATTGCTCGTGAAAGGTGCCAGATTGACAGCT  1554

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1555  TTGGAAACTGAAGGACTCTAATTATCCACAGACCAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCT  1628

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1629  GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATACAAATA  1702

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1703  TTTCTTCAGCTCTATTCCATAAGGCAGTGGGCACCCAGATGTTTCCATATGCATGGTTGTGCCTTCTTTTGACC  1776

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1777  TATTGCAGGAAAATGAATAATTTTTCTTTTTTCCACCCAGCTGCTGATAAAGATGATAGTTCAGAAGACATTTC  1850

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1851  AGTGCCGAGTAGTCCACATACAGAAGCTATACAGCATAGTTCGGTCAGCACATCCAATGGAGTCAGTTCAACCT  1924

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1925  CCAAGGCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCTCTTTCACAG  1998

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1999  ATCGTTATGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGATTAAAAACCTGCAGTACAACAGTTTTAGA  2072

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2073  TACTCATTAGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTTCCATTTATGCGAAATCTGTGGTTGTAAATT  2146

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2147  TTTTTTTTTTACTTGAAATTAAATTTGGCTCTAAAGTTGGTGTAGCAGCAGTTGATCAGACTGAAAAACGGTTT  2220

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2221  TTAGTCTCTGGAAAAAGACTGATTTTGCTTTTTTTATAAATATTATTAGATTTATTAATTTTTCTGTGCTCAAT  2294

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2295  GTGTAAATTGTATTATAATTCATTGTGATTTATTTCACTTTTAATTTGCTGGTGTTTTAATAAATGGGGGTGTT  2368

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2369  ACTGAATCTTTCTTCCCACTTCCATTTCTTTTGACCACCCCTTAACCCTCAACTGTGACGGTAGTAGTATTATC  2442

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2443  ATTTATACCAAAGTTTTGCATAGTCCCTGTTGACTTTGTAATGTTAACGGAGTCATAAAAGCACTAGGCAAGAG  2516

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2517  AAAGATAGAAATTTGCTTTTAATCTTTTTGCCTTTTATTTTGCACATTATGCAAAAGGAAAAACATTAAAGAAC  2590

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2591  ACTTTTTTTTAAGTGAGTGAAAACATGGTAAAGACATACAGTGCTTTTATGCACATTGTTAAGCTAAATCAAGG  2664

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2665  TCATTTATAATCATTTTCCTTTTTTATTTAAGATTTTAAGTAAACAAATTTTAGAATTTTCAGCATTTCAAAAA  2738

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2739  TGATTTTATTTTTCAAGTCTTAAATTCAATATTTTACACCTATGTTTTGAGGCTAAAAATATGAAATTATATAA  2812

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2813  TGTATGATACAGGGTTATCAAATATCTAATAATTTTTGAAATTAGCTCTTGTTTTTGGTTTTTTTGTTGTTGTT  2886

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2887  TTTACAGATTTCAGGTTACAAACTGCAAAGTTTATGCATAATTAAGTATGGTATGGTTGCCAGAAAAGCCTAAA  2960

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2961  ATTACTACTTAGAAAATTTAAGACTGTTTACCCCCATTGTCTTGTACTTGCGAGCTAACTTGTACTATTCTTGT  3034

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3035  GAAAGCACTGTCATCTTTTAGTAGCAAATTTTGATAATGTTTCTCGTGGAAAAAAAAATCAGTATCTATCTTTA  3108

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3109  GAACAATGTAATTATAATGTGGGAAGTGTGCATGAATGAGAGAGAGTGTGTGTGTATCTGTGTGTGTGTGCGCG  3182

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3183  TGTGTGTGTGTCTTTTAATAGTTTATGCCAGCAATCTTTGCTTGAATGTTTAACGATGCCTTCAGTGTGATGCT  3256

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3257  GGCCAATAGATGATTGCAGTTTAAAATGTCATTATTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTT  3330

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3331  GTTTCTGATGAGATGATTGTAGGTACATTTTTCTCATTATCCAATCATCTGTGGGATACTTAGTTTTCTAATGT  3404

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3405  GCCATTATCTATTTTTATTCTGCAGTTATGTTCAAAATACAGTACATATTTTAAAATAGAATAAATTGTTAAAC  3478

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3479  ATAAAATTTTAAAAGTAGTAGATGTGCGTAAGAAAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACT  3552

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3553  TCTGGCATTCAAGCAGGATTCCACTATGTAAATATCTGTAATGCATTTATAATAAGTTGTGTAGTTTGTCCTGC  3626

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3627  ATCCATACTACACTATTTGCTAAAGTCTCAGTGCCATCTCCTAATGAGACTGACATTTTAAAAGTCTGTATGGA  3700

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3701  ATATCCTTGATAATTCAAGGAAATATCCCTCCTGCCTAAGTTCCAAACTGGGAAACATTCAAATTATATAAATG  3774

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3775  ACATTTCAGGACTTTAAGTATGAAGATAATGGGAATTTTATTGTTTTGCTTTTTAAAATGAGAGCATTTTTATT  3848

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3849  TGATAATTTTTTTTAAATTTTTAATTTTTAACTAATTTCATTATTTTAAAGTAATCAGTTTTTCAAATCATGAT  3922

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3923  TTTGATATCATTATTCTAAGGAGTTATCTCAAAGGCACAAAATATGAATTCTGCAAGAAGGCTATTTTTTATTG  3996

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3997  TAGTTTGAATGGGTTAGGAAAAGCCTCAATTTTTCACTCTTAAGTCCTTCAGTACATTTTTCTTTCATCTTATT  4070

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 4071  ACTTATGCAAGTTAAGGTTCTTTGGTAACAGAATTCTTGCAACTGTAAAATAAAACTACATAGATGTAAGAAGT  4144

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 4145  CATGTAAACGGTTAACAAGCTTACCAAGGTTAGCAAAACTTTCATTGTAAATCAGTCTGTACTGAGCAAATAAA  4218

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 4219  AATCATTATTAGTTGTATAAACACAAATTCCATTTTGACTTTCAGGATGTCATACTACTTCTGTACCTAGCATT  4292

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 4293  TTCAGTCCTTATATTTGCAATGTTACACAAACTGTACTATTTTCTTTTATGTGCAGTTTGCATGAGTAAACCAT  4366

Query  628  ---------------------------  627
                                       
Sbjct 4367  CAGAGAATAAATTCTATCTTTAAATTA  4393