Nucleotide Global Alignment

Description

Query:
TRCN0000468300
Subject:
NR_045771.2
Aligned Length:
4238
Identities:
626
Gaps:
3611

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCAGTCCGATCTCGCGAGAGAGGACGGAAGCCTGTGGGAGCCCGTGGCCTTTAAAGTGCCGTTCAGCCTTTTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCCAGGGGTGCTTTGTAAACACGGCTGTGCTCAGGGCTCGCGGGTGACCGAAAGGATCATGAACTAGTGACCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAAAGGGTACTAGATGGAAACTTGAGAAAGGACTGCTTATTGATAACAGCTAAGGTATTCCTGGAAGCAGAGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAATAAAGCTCATGGCCCACCAGCTAGAAAGTATTCTTGCCATGAGAAAAAGAATGTGATAAGTTATTCAACTT  296

Query    1  ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATACAAGGACCTGTGGAATATGAGTGATGACAAACCCTT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATACAAGGACCTGTGGAATATGAGTGATGACAAACCCTT  370

Query   75  TCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAACGAGGATCATTTGGCTGTCCATAAACATAAACATG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAACGAGGATCATTTGGCTGTCCATAAACATAAACATG  444

Query  149  AGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACAAGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACAAGA  518

Query  223  TTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAGTTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAGTTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGC  592

Query  297  TTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATCCCCTCTTGCAACACCTATCATAAGAAGCAAAATTG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATCCCCTCTTGCAACACCTATCATAAGAAGCAAAATTG  666

Query  371  AGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTCCTTTACCTCACCCAGAGTCTACTACCAGTGATGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTCCTTTACCTCACCCAGAGTCTACTACCAGTGATGAG  740

Query  445  AAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCAGCTATTGTTCGTCCAGCATCATTACAGGTTCCCAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCAGCTATTGTTCGTCCAGCATCATTACAGGTTCCCAA  814

Query  519  TGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCAGCAGGCAGTACCTTCACCAACCTCAAGTACTGTAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCAGCAGGCAGTACCTTCACCAACCTCAAGTACTGTAA  888

Query  593  TCACCCAGGCACCATCCTCTAACAGGCCAATTGTG---------------------------------------  627
            ||||||||||||||||||||||||||||||||||.                                       
Sbjct  889  TCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTGTACCAGGCCCATTTCCTCTTCTGTTACATCTTCCT  962

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  963  AATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATTACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCC  1036

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1037  ACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGGAATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGT  1110

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1111  CAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGCAACATCCTCCAGTTACCAATGGTGATACTGTCAAA  1184

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1185  GGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAATCTCGACCGCAGTCATTACAACAGCCAGCCACATC  1258

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1259  CACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAG  1332

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1333  CAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTTTAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGA  1406

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1407  CAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAAGCTGAAGACTTGAGTTCATTAAATGGTCAGCTGCA  1480

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1481  GTGAATATATTGCTCGTGAAAGGTGCCAGATTGACAGCTTTGGAAACTGAAGGACTCTAATTATCCACAGACCA  1554

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1555  GAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCTGAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTG  1628

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1629  TAACCGCCATGCAGAAGAAATCTGGCTATCATACTGCTGATAAAGATGATAGTTCAGAAGACATTTCAGTGCCG  1702

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1703  AGTAGTCCACATACAGAAGCTATACAGCATAGTTCGGTCAGCACATCCAATGGAGTCAGTTCAACCTCCAAGGC  1776

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1777  AGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCTCTTTCACAGATCGTTA  1850

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1851  TGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGATTAAAAACCTGCAGTACAACAGTTTTAGATACTCAT  1924

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1925  TAGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTTCCATTTATGCGAAATCTGTGGTTGTAAATTTTTTTTT  1998

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1999  TTTACTTGAAATTAAATTTGGCTCTAAAGTTGGTGTAGCAGCAGTTGATCAGACTGAAAAACGGTTTTTAGTCT  2072

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2073  CTGGAAAAAGACTGATTTTGCTTTTTTTATAAATATTATTAGATTTATTAATTTTTCTGTGCTCAATGTGTAAA  2146

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2147  TTGTATTATAATTCATTGTGATTTATTTCACTTTTAATTTGCTGGTGTTTTAATAAATGGGGGTGTTACTGAAT  2220

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2221  CTTTCTTCCCACTTCCATTTCTTTTGACCACCCCTTAACCCTCAACTGTGACGGTAGTAGTATTATCATTTATA  2294

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2295  CCAAAGTTTTGCATAGTCCCTGTTGACTTTGTAATGTTAACGGAGTCATAAAAGCACTAGGCAAGAGAAAGATA  2368

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2369  GAAATTTGCTTTTAATCTTTTTGCCTTTTATTTTGCACATTATGCAAAAGGAAAAACATTAAAGAACACTTTTT  2442

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2443  TTTAAGTGAGTGAAAACATGGTAAAGACATACAGTGCTTTTATGCACATTGTTAAGCTAAATCAAGGTCATTTA  2516

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2517  TAATCATTTTCCTTTTTTATTTAAGATTTTAAGTAAACAAATTTTAGAATTTTCAGCATTTCAAAAATGATTTT  2590

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2591  ATTTTTCAAGTCTTAAATTCAATATTTTACACCTATGTTTTGAGGCTAAAAATATGAAATTATATAATGTATGA  2664

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2665  TACAGGGTTATCAAATATCTAATAATTTTTGAAATTAGCTCTTGTTTTTGGTTTTTTTGTTGTTGTTTTTACAG  2738

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2739  ATTTCAGGTTACAAACTGCAAAGTTTATGCATAATTAAGTATGGTATGGTTGCCAGAAAAGCCTAAAATTACTA  2812

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2813  CTTAGAAAATTTAAGACTGTTTACCCCCATTGTCTTGTACTTGCGAGCTAACTTGTACTATTCTTGTGAAAGCA  2886

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2887  CTGTCATCTTTTAGTAGCAAATTTTGATAATGTTTCTCGTGGAAAAAAAAATCAGTATCTATCTTTAGAACAAT  2960

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 2961  GTAATTATAATGTGGGAAGTGTGCATGAATGAGAGAGAGTGTGTGTGTATCTGTGTGTGTGTGCGCGTGTGTGT  3034

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3035  GTGTCTTTTAATAGTTTATGCCAGCAATCTTTGCTTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCCAAT  3108

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3109  AGATGATTGCAGTTTAAAATGTCATTATTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTTCTG  3182

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3183  ATGAGATGATTGTAGGTACATTTTTCTCATTATCCAATCATCTGTGGGATACTTAGTTTTCTAATGTGCCATTA  3256

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3257  TCTATTTTTATTCTGCAGTTATGTTCAAAATACAGTACATATTTTAAAATAGAATAAATTGTTAAACATAAAAT  3330

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3331  TTTAAAAGTAGTAGATGTGCGTAAGAAAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCA  3404

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3405  TTCAAGCAGGATTCCACTATGTAAATATCTGTAATGCATTTATAATAAGTTGTGTAGTTTGTCCTGCATCCATA  3478

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3479  CTACACTATTTGCTAAAGTCTCAGTGCCATCTCCTAATGAGACTGACATTTTAAAAGTCTGTATGGAATATCCT  3552

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3553  TGATAATTCAAGGAAATATCCCTCCTGCCTAAGTTCCAAACTGGGAAACATTCAAATTATATAAATGACATTTC  3626

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3627  AGGACTTTAAGTATGAAGATAATGGGAATTTTATTGTTTTGCTTTTTAAAATGAGAGCATTTTTATTTGATAAT  3700

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3701  TTTTTTTAAATTTTTAATTTTTAACTAATTTCATTATTTTAAAGTAATCAGTTTTTCAAATCATGATTTTGATA  3774

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3775  TCATTATTCTAAGGAGTTATCTCAAAGGCACAAAATATGAATTCTGCAAGAAGGCTATTTTTTATTGTAGTTTG  3848

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3849  AATGGGTTAGGAAAAGCCTCAATTTTTCACTCTTAAGTCCTTCAGTACATTTTTCTTTCATCTTATTACTTATG  3922

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3923  CAAGTTAAGGTTCTTTGGTAACAGAATTCTTGCAACTGTAAAATAAAACTACATAGATGTAAGAAGTCATGTAA  3996

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 3997  ACGGTTAACAAGCTTACCAAGGTTAGCAAAACTTTCATTGTAAATCAGTCTGTACTGAGCAAATAAAAATCATT  4070

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 4071  ATTAGTTGTATAAACACAAATTCCATTTTGACTTTCAGGATGTCATACTACTTCTGTACCTAGCATTTTCAGTC  4144

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 4145  CTTATATTTGCAATGTTACACAAACTGTACTATTTTCTTTTATGTGCAGTTTGCATGAGTAAACCATCAGAGAA  4218

Query  628  --------------------  627
                                
Sbjct 4219  TAAATTCTATCTTTAAATTA  4238