Nucleotide Global Alignment
Description
- Query:
- TRCN0000468356
- Subject:
- XR_427108.4
- Aligned Length:
- 4846
- Identities:
- 1280
- Gaps:
- 3558
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCATGTCCCTTCTGCAGTGCCTTCCTCTGTGGCCCTCAAAGGGAAACTGAAGCCTTTGAGGACATGAAGACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCATTAGGCCAACGAGGGGTCTTGGAACTCCAGATCAAAGAGAATAAGAAAGACCTGACTCTGTGTGTGTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTGTGTGTGTACGTGTGTGTGTGTGTGTGTGGCAGAGGGGGGTGTGGTCATGGGGTATTGACATGAATACGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGGCAGGAAGCATCTGAAATCAGAGCTAACTTGGGAGGCACAGAACACGGGGTGCCTGGAAGGGGAACAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGTTGTGGGGCACAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGGCCACTTCTGCCTTTGGAAAATGTTTCACAACGCCCCATGTTGTGTGTGTGTGTGAATCGGCCGATGTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCGAATGTTGATGTAAGAGGCAGGGCACTCGGCTGCGGATGGGTAACAGGGCGTGGGCTGGCACACTTACTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACCAGTGCCCAGAGAGGGGGTGCAGGCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACCTGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCGGCATTTCAATGACAGGGCACCTTCAGCCTGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCCTCATGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCGTGGTGACAGGC 814
Query 1 ------ATGGTGCGATGTCAGCTCACTGCAACCTCTACCTCCC--AGGTGCCCCGCACCGTCCTCTGGCTGACC 66
.||| ||||.|| ||||.|.||||||..||| |||||||||||||||||||||||||||||
Sbjct 815 AAGGACTTGG-GCGAGGT-------CTGCCATCTCTACTACCCTAAGGTGCCCCGCACCGTCCTCTGGCTGACC 880
Query 67 ATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGC 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 ATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGC 954
Query 141 TGGACGAATCCCACTCTGGGGTGGCGTCCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACT 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 TGGACGAATCCCACTCTGGGGTGGCGTCCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACT 1028
Query 215 ACGGGCTGCGGAAGCTGGAAGCTTTTTTTGGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTAT 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 ACGGGCTGCGGAAGCTGGAAGCTTTTTTTGGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTAT 1102
Query 289 GTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCC 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 GTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCC 1176
Query 363 CGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCGGCCCTGG 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 CGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCGGCCCTGG 1250
Query 437 TCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCGGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCC 510
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1251 TCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCC 1324
Query 511 ACCATCGCCCTGTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAA 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325 ACCATCGCCCTGTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAA 1398
Query 585 AACCAACCAGGCTGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACA 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1399 AACCAACCAGGCTGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACA 1472
Query 659 ACGCCACCGTGGCCGTGGACATTTACCAGGGGGGCGTGATCCTGGGCTGCCTGTTCGGCCCCGCGGCCCTCTAC 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1473 ACGCCACCGTGGCCGTGGACATTTACCAGGGGGGCGTGATCCTGGGCTGCCTGTTCGGCCCCGCGGCCCTCTAC 1546
Query 733 ATCTGGGCCATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGAT 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547 ATCTGGGCCATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGAT 1620
Query 807 GG------------------------------------------------------------------------ 808
||
Sbjct 1621 GGAGGCTGGAGTGCAATGGCGCGATCTCCGGCTCACCGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGC 1694
Query 809 -------------------------------------------------------------------------- 808
Sbjct 1695 CTCAGCCTCCTGACCAGCTGGGATTACAGGCCACCACACCCAGCTAATTTTGTATTTTCAGTAAAGACGGGGTT 1768
Query 809 -------------------------------------------------------------------------- 808
Sbjct 1769 TCTCCATGTTGGTCAGGGTGGTCTCGAACTCCCAGCCTCAGGTGATCTGCCCTCCTCAGCCTCCCAAAGTGCTG 1842
Query 809 -------------------------------------------------------------------------- 808
Sbjct 1843 GGATTACAGGCGTGAGCCACCGCGCCCGGCTCTTTCTTTCTTTTTTGAGACAGGATTTCACTCTGTTGCTCAGG 1916
Query 809 -------------------------------------------------------------------------- 808
Sbjct 1917 CTGGAGTGCAATGGCGCCATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCGAGTCATTGGGACTACAGGCT 1990
Query 809 -------------------------------------------------------------------------- 808
Sbjct 1991 CATGCCACCACACCAGGCTAATTTTTAAAATTATTTGTAGAGATGTGGTCTTCCTATGTTTCCCAGGCTGGTCT 2064
Query 809 -------------------------------------------------------------------------- 808
Sbjct 2065 CGAACTCCTGGGCTCAAGTGATCTTCCCGCCTTGGCTTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCCCA 2138
Query 809 -------------------------------------------------------------------------- 808
Sbjct 2139 CTCAGCTTTGTTTCCTTCATGTAGCCCAGAGGGCGACACTATAAGCCCCATTTTACAGATGAGAAAACAGATCC 2212
Query 809 -------------------------------------------------------------------------- 808
Sbjct 2213 TGACAGATGAGGTGACTTGCTGGAAGCTGCAGACCCAGGACTAACAGAAGCCTTTTCCCCAAAACTGTTTAGTC 2286
Query 809 -------------------------------------------------------------------------- 808
Sbjct 2287 TTCAGCAACCAGCTATGGGATGGGAGCTCCCCATTTCTCCCCACCCATCCCCTCTTGCCACCTAGGGACAGAGC 2360
Query 809 -------------------------------------------------------------------------- 808
Sbjct 2361 TGTCCCAGTTCAACAGTGGAAAAACAGAGCATGCCCCCAGGGATAAATCGGTTGAGGGACTACAGAGGATCTCT 2434
Query 809 ------------------------------------------------------AGGGCTTCCTGAGGCTGCGG 828
||||||||||||||||||||
Sbjct 2435 CCTCTGGAATCCCCAGTCCTGTCTACTCCTCACCAAGGAGTTCACCCCCACCCCAGGGCTTCCTGAGGCTGCGG 2508
Query 829 TGGTCACGCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCG 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 TGGTCACGCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCG 2582
Query 903 GGACCTGAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGC 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583 GGACCTGAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGC 2656
Query 977 TGCCCATCCTCACGTTCACCAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2657 TGCCCATCCTCACGTTCACCAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTC 2730
Query 1051 ACCTCTTCCATCATGGTGCTAGTCTGCGCCATCAACCTCTACTTCGTGGTCAGCTATCTGCCCAGCCTGCCCCA 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2731 ACCTCTTCCATCATGGTGCTAGTCTGCGCCATCAACCTCTACTTCGTGGTCAGCTATCTGCCCAGCCTGCCCCA 2804
Query 1125 CCCTGCCTACTTCGGCCTTGCAGCCTTGCTGGCCGCAGCCTACCCGGGCCTCAGCACCTACCTGGTCTGGACCT 1198
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 2805 CCCTGCCTACTTCGGCCTTGCAGCCTTGCTGGCCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCTGGACCT 2878
Query 1199 GTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCACCACTTCCTGTATGGGCTCCTTGAAGAG 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 GTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCACCACTTCCTGTATGGGCTCCTTGAAGAG 2952
Query 1273 GACCAGAAAGGGGAGACCTCTGGC-------------------------------------------------- 1296
||||||||||||||||||||||||
Sbjct 2953 GACCAGAAAGGGGAGACCTCTGGCTAGGCCCACACCAGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTGGC 3026
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3027 CTGCTGGATGTGGAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACCTGGGG 3100
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3101 GCTTTAGGGACCTGCTGTTTCCTAGCGCAGCCATGTGATTACCCTCTGGGTCTCAGTGTCCTCATCTGTAAAAT 3174
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3175 GGAGACACCACCACCCTTGCCATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACA 3248
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3249 AACGAAAAACATTTCAAAAGGTATTTATTGAGCACCTGCAGGCGTGACCTGACAGCCCAAGGGTGGGTGGGGTG 3322
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3323 AGGGCTTGAGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTGTCTGATGAATGTTAAATTAT 3396
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3397 CTATCTATCTATTTATTTATTTATTTGAGACAGGGAAAGGGTCTCCCTCTGTTGCCAAGGCTGGAGTGCAGTGG 3470
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3471 CGCAATCTTAACTCATTGCAACCTCCACCTTCTGGGTTCAAGCGATTCTCTTTATTCAGCCCCGGGAGTGGCGC 3544
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3545 GCGCCACCACGCCCAGCTAATTTGTGTATTTTCAGCAGAGACGGGGTTTGCCATGCTGGCCAGGCTGGTCTCGA 3618
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3619 ACTGCTGGATTCAAGTGATCCGCCCATCTCCGTCTCCCAAAGTGCTGGGAATTACAGGCGTGAGCCACCAAACC 3692
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3693 CGGCCTGATTAAAGTTAAATAAATACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATGGGAACCGGGAAGGCA 3766
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3767 CGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCAGGGTCTGGTCCGCTCCTATTCGCCGCAGCCTTTCTGTT 3840
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3841 CCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGA 3914
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3915 ACCCAAGAGTCTGTGCCTCTGAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC 3988
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 3989 GCCGCGCCGTTACCGCTCCCTCTCTGCTGACTGCTCCCCCTAGGGGCAGAGACGGTCCCGACGCCCGCCATCCC 4062
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4063 GCCCCGGCCTCACCCCTCCCCGCCAGGCGGAACGACGCGGGGAGGCGGGCGCTCGGGGCTCGCGCCAGGGGCCC 4136
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4137 CAGAATCCTTCGGGGAGAGTGGGTGGGAGGAAGCTGTGTGGGCGGGGAGCCCCCTCTGCCTTAGGGAGCGGCTG 4210
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4211 GGCACCCATTCGCCCCATTCAGGGGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGGCTCCCCCAAGTCC 4284
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4285 CTCCTCCAGCCTCGTCGGGTCCCTCAGACCCCAGCCCAGGACCTGCGGAGGGCCGCAGCGAGGAGAGGCCAACA 4358
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4359 GGCCTTTCCCTAGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAG 4432
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4433 GGCAGGCGGCCTGGCTCCGCGCTCAGGTCCGGACGCTTGTTTATGAGAAGAATTTCCTCTTTCTTAAAAGGGCA 4506
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4507 ACGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGG 4580
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4581 GTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGA 4654
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4655 GGAGATGGATGGGGGACGTTTAGCGAAGAAAGGCATCTCCCAGATCCTTTAGCCTCCTGGAAGTGCCCCCGTTG 4728
Query 1297 -------------------------------------------------------------------------- 1296
Sbjct 4729 TACCCCCTACACACCCCTCTTGGCATTGAGTGCCAGTCCTCTGCCAGGCTCTGTGTTACAAGTTGGGGAGGGCG 4802
Query 1297 ------------------------------------ 1296
Sbjct 4803 GCAAAGTCCCGAATTAAAGATGTCAGTTCTCAAGGA 4838
