Nucleotide Global Alignment
Description
- Query:
- TRCN0000468412
- Subject:
- NR_153504.1
- Aligned Length:
- 2783
- Identities:
- 1188
- Gaps:
- 1507
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCGCGAACGAGAAAGGAGGAGGGCGCTACAGGCGACAGCGCTGCAGACGCCATTATCCTCTGCTTCTCCGC 74
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 75 TGCACGGACGTCGCCGTCGTGCTCGTCTCCCACTCGATTGCGGCCTATTGGTGGATCCATTTAATTCAAGAAAA 148
Query 2 TGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA 75
||||.||.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGACCGAACAGCCAGAAGAAACCTTCCCCAACACCGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAA 222
Query 76 GATATGGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCA 149
||||||||||||||.|||||.|||||||||||||||||.||||||||||||||||||||.||||||.|||||||
Sbjct 223 GATATGGAAGAGGAGCAAGCCTTTAAAAGATCTAGAAATACTGATGAGATGGTTGAATTGCGCATTTTGCTTCA 296
Query 150 GAGCAAGAATGCTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCA 223
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCAAGAATGCTGGAGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGAC---------- 360
Query 224 GTGTTTCAGTCCCAGACAGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAA 297
||||.||||||||||||||||||||||.||.|||||||||
Sbjct 361 ----------------------------------CATACTGAGTATCAGTGCTGATATTGAGACGATTGGAGAA 400
Query 298 ATTCTGAAGAAAATCATCCCTACCTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCC 371
|||||||||||||||||||||||||||||||||
Sbjct 401 ATTCTGAAGAAAATCATCCCTACCTTGGAAGAG----------------------------------------- 433
Query 372 GCTCGAATCTGATGCTGTGGAATGCTTAAATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGC 445
||||||||.||||||||||||||||||||.|||||||||||.|
Sbjct 434 -------------------------------TACCAACATTATAAAGGAAGTGACTTTGATTGCGAGTTGAGAC 476
Query 446 TGTTGATTCATCAGAGTCTAGCAGGAGGAATTATTGGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAAC 519
|||||||||||||||||||.|||||||||||.|||||.||.|||||||||||||||||||||||||||||.|||
Sbjct 477 TGTTGATTCATCAGAGTCTGGCAGGAGGAATAATTGGTGTTAAAGGTGCTAAAATCAAAGAACTTCGAGAAAAC 550
Query 520 ACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCATTCCACTGACAGAGTTGTTCTTATTGGAGGAAA 593
|||||.||.||.|||||||||||||||||.|||||.|||||.||.|||||||||||||||||||||||||||||
Sbjct 551 ACTCAGACAACAATCAAGCTTTTCCAGGAGTGCTGCCCTCACTCTACTGACAGAGTTGTTCTTATTGGAGGAAA 624
Query 594 ACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC 667
|||.||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 625 ACCTGATAGGGTTGTAGAATGCATCAAGATCATCCTTGACCTTATATCTGAGTCTCCCATCAAAGGACGTGCAC 698
Query 668 AGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGTCGC 741
|.||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||.||.
Sbjct 699 AACCTTATGATCCCAACTTTTATGATGAGACCTATGATTATGGTGGTTTTACAATGATGTTTGATGACCGCCGA 772
Query 742 GGACGCCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC 815
|||||.||.||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 GGACGACCTGTGGGATTCCCCATGAGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGGTCGGGGTGGGCGTCC 846
Query 816 CATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTCCCGGACGAG 889
|||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||.||.||.||.||.||||
Sbjct 847 CATGCCTCCTTCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCACCACCACCACCTGGTCGAG 920
Query 890 GCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTCATG 963
|.|||||||||||.||||||||.||||||||.|||||||||||.|||||||||||.|||||||||||.||.|||
Sbjct 921 GTGGCCGGGGTGGCAGCAGAGCCCGGAATCTGCCTCTTCCTCCTCCACCACCACCCAGAGGGGGAGATCTAATG 994
Query 964 GCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGA 1037
||.||||||||||||||.||.|||||||||||.||.||.|||||||||||.|||||||||||||||||||||||
Sbjct 995 GCTTATGACAGAAGAGGAAGGCCTGGAGACCGCTATGATGGCATGGTTGGGTTCAGTGCTGATGAAACTTGGGA 1068
Query 1038 CTCTGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGGATATGATT 1111
.||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.|
Sbjct 1069 TTCTGCAATTGACACATGGAGCCCATCAGAATGGCAAATGGCTTATGAACCACAGGGTGGTTCTGGATATGACT 1142
Query 1112 ATTCCTATGCAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCC 1185
||||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct 1143 ATTCTTATGCAGGGGGCCGTGGCTCATATGGTGATCTTGGCGGACCTATTATCACTACACAAGTAACTATTCCC 1216
Query 1186 AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTC 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 1217 AAAGATTTGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATTCGTCATGAATCTGGAGCATC 1290
Query 1260 GATCAAAATTGATGAGCCTTTAGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC 1333
.||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291 AATCAAAATTGATGAACCTTTAGAAGGATCTGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATAC 1364
Query 1334 AGAATGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATGCAG--ATGT----------------------T 1383
||||.||||||||||||||||||||||||||||||||||||.|.| |.|| |
Sbjct 1365 AGAACGCACAGTATTTGCTGCAGAACAGTGTGAAGCAGTATTCTGGAAAGTTTTTCTAAGACTAGTGAAGAACT 1438
Query 1384 GAAGGATTC----------------------------------------------------------------- 1392
||||||.||
Sbjct 1439 GAAGGAGTCCTGCATCTTTTTTTTTTTATCTGCTTCTGTTTAAAAAGCCAACATTCCTCTGCTTCATAGGTGTT 1512
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1513 CTGCATTTGAGGTGTAGTGAAATCTTTGCTGTTCACCAGATGTAATGTTTTAGTTCCTTACAAACAGGGTTGGG 1586
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1587 GGGAGGGCATGCAAAAACTAACATTGAAATTTTGAAACAGCAGCAGAGTGAGTGACTTTTATTTTTTGTTCATT 1660
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1661 GTTGGTGGTTTTAAAAAAAATTCCCCCCATGTAATTATTGTGAACACCTTACTTTGTGGTCACTGTAACATTGG 1734
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1735 GGGGTGGGACAGGGAGGAAAGTAATAGTCCACATGTCCCTGGCATTTGTTCAGAGCAGTGTGCAGAATGTAATG 1808
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1809 CTCTTTTGTAAGAAACGTTTTATGATTTTTAAAATAAATTTAGTGAATCTATTTTTGGTGGTCTTTTTTTTTTT 1882
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1883 TAAGACAATTTCAAATGGTGGTTGAATTTTCCAGCCCACCCCTAAACTAAACACTAAGTTTGATTTTCAGCAGC 1956
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1957 TCCTCTGTTGGATATAAGTGCACCTCTTGGACATAGACAAAATACATTGGCAAACTCAGTTTGGGTGACTTCTT 2030
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2031 AATGGTTGGAAAGACTTGGCTTGATAAATTTCCATCACATATTCATGCTTATAATAAGCTTGGGATTTTGTTTG 2104
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2105 TTTTTGCAAATGTTTGCCACTACTTTTCAACAGTTTTCTGTTAGTTGTGGAGAACTGCGGTGGGGAGCAATACT 2178
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2179 ACAAGAGTTACGCATCTTAAGTATATGCCAGAAGCCTGATGGGCAATGAGCTTTATTAACCAGAGTAAACTTGG 2252
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2253 TTATGGAAGTGGCTGATGCTGAATAAATCCTGGTTATTTTTGTTAGATAATTTCTCACCTATAGACTTAAAGCT 2326
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2327 GTCAACCTGCTAGTGTCTTGTTAGTTGAACTTTGTAAAAATATATATATATACTTGTTTTTCCATTGTATGCAC 2400
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2401 AATGAAAGAAAAAAGATGTACCATTTCTCTGTTGTGTGTTGAATTATGTAGGAAATGTTTGTGAACGATTCGAA 2474
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2475 AAAAATGGAAAAAGTTCCTGTGGATGTTTTGTGTAGTAACTTGGCATCTGTATTGATAGTTCAAAATCCACATC 2548
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2549 TAAATAAAACTTCCATGATGTTAGTTATGACGTGTGCCCAATTTGAAAAGGGGTTGATTAATACATGTAAAGTT 2622
Query 1393 --------------------------------------------- 1392
Sbjct 2623 TGTTGAAGTGTTCCTCTTGTAAGGAAATACAGTAATCTTAAATTA 2667
