Nucleotide Global Alignment
Description
- Query:
- TRCN0000468454
- Subject:
- XR_938769.2
- Aligned Length:
- 2729
- Identities:
- 1368
- Gaps:
- 1361
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATTCCGGCCGCGCCGGAAGTCTCTACTGAGGAAAGCTATGAGGATACTCTGTTCGTAAGCTCCCGGTGAATTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTTCCACAGACTCGGAAGAAAGGTTGGATAAGAGTTCACTGGAGATTGACAAGTACTCGGGATAGTGAAAAGC 148
Query 1 ------------ATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCA 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGGAGTTGGAACATGGATAGCCGCTTGCAGGAGATCCGGGAGCGGCAGAAGTTACGGCGACAGCTCCTCGCGCA 222
Query 63 GCAGTTGGGAGCTGAAAGTGCCGACAGCATTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAGAAATTGCTG 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAGTTGGGAGCTGAAAGTGCCGACAGCATTGGTGCCGTGTTAAATAGCAAAGATGAGCAGAGAGAAATTGCTG 296
Query 137 AAACAAGAGAAACTTGCAGGGCTTCCTATGATACCTCTGCTCCAAATGCAAAACGTAAGTATCTGGATGAAGGA 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAACAAGAGAAACTTGCAGGGCTTCCTATGATACCTCTGCTCCAAATGCAAAACGTAAGTATCTGGATGAAGGA 370
Query 211 GAGACAGATGAAGACAAAATGGAAGAATATAAGGATGAACTAGAAATGCAACAGGATGAAGAAAATTTGCCATA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGACAGATGAAGACAAAATGGAAGAATATAAGGATGAACTAGAAATGCAACAGGATGAAGAAAATTTGCCATA 444
Query 285 TGAAGAAGAGATTTACAAAGATTCTAGTACTTTTCTTAAGGGAACACAGAGCTTAAATCCCCATAATGATTACT 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGAAGAAGAGATTTACAAAGATTCTAGTACTTTTCTTAAGGGAACACAGAGCTTAAATCCCCATAATGATTACT 518
Query 359 GCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGATGTAGGTTTAGCTGACAGATTTGAA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCAACATTTTGTAGACACTGGACATAGACCTCAGAATTTCATCAGGGATGTAGGTTTAGCTGACAGATTTGAA 592
Query 433 GAATATCCTAAACTGAGGGAGCTCATCAGGCTAAAGGATGAGTTAATAGCTAAATCTAACACTCCTCCCATGTA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAATATCCTAAACTGAGGGAGCTCATCAGGCTAAAGGATGAGTTAATAGCTAAATCTAACACTCCTCCCATGTA 666
Query 507 CTTACAAGCCGATATAGAAGCCTTTGACATCAGAGAACTAACACCCAAATTTGATGTGATTCTTCTGGAACCCC 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTTACAAGCCGATATAGAAGCCTTTGACATCAGAGAACTAACACCCAAATTTGATGTGATTCTTCTGGAACCCC 740
Query 581 CTTTAGAAGAATATTACAGAGAAACTGGCATCACTGCTAATGAAAAATGCTGGACTTGGGATGATATTATGAAG 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTTAGAAGAATATTACAGAGAAACTGGCATCACTGCTAATGAAAAATGCTGGACTTGGGATGATATTATGAAG 814
Query 655 TTAGAAATTGATGAGATTGCAGCACCTCGATCATTTATTTTTCTCTGGTGTGGTTCTGGGGAGGGGTTGGACCT 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAGAAATTGATGAGATTGCAGCACCTCGATCATTTATTTTTCTCTGGTGTGGTTCTGGGGAGGGGTTGGACCT 888
Query 729 TGGAAGAGT--------------------------------------------------GTGTTTACGAAAATG 752
||||||||| |||||||||||||||
Sbjct 889 TGGAAGAGTGGGGGAACTCCCAACAGGATTTCCTGTGGTGGAAAGGAAGCTTGTTGGAAGTGTTTACGAAAATG 962
Query 753 GGGTTACAGAAGATGTGAAGATATTTGTTGGATTAAAACCAATAAAAACAATCCTGGGAAGACTAAGACTTTAG 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGTTACAGAAGATGTGAAGATATTTGTTGGATTAAAACCAATAAAAACAATCCTGGGAAGACTAAGACTTTAG 1036
Query 827 ATCCAAAGGCTGTCTTTCAGAGAACAAAGGAACACTGCCTCATGGGGATCAAAGGAACTGTGAAGCGTAGCACA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCCAAAGGCTGTCTTTCAGAGAACAAAGGAACACTGCCTCATGGGGATCAAAGGAACTGTGAAGCGTAGCACA 1110
Query 901 GACGGGGACTTCATTCATGCTAATGTTGACATTGACTTAATTATCACAGAAGAACCTGAAATTGGCAATATAGA 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GACGGGGACTTCATTCATGCTAATGTTGACATTGACTTAATTATCACAGAAGAACCTGAAATTGGCAATATAGA 1184
Query 975 AAAACCTGTAGAAATTTTTCATATAATTGAGCATTTTTGTCTTGGTAGAAGACGCCTTCATCTATTTGGAAGAG 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAAACCTGTAGAAATTTTTCATATAATTGAGCATTTTTGTCTTGGTAGAAGACGCCTTCATCTATTTGGAAGAG 1258
Query 1049 ATAGTACAATTCGACCAGGCTGGCTCACAGTTGGACCAACGCTTACAAATAGCAACTACAATGCAGAAACATAT 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATAGTACAATTCGACCAGGCTGGCTCACAGTTGGACCAACGCTTACAAATAGCAACTACAATGCAGAAACATAT 1332
Query 1123 GCATCCTATTTCAGTGCTCCTAATTCCTACTTGACTGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATC 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCATCCTATTTCAGTGCTCCTAATTCCTACTTGACTGGTTGTACAGAAGAAATTGAGAGACTTCGACCAAAATC 1406
Query 1197 GCCTCCTCCCAAATCTAAATCTGACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTG 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCCTCCTCCCAAATCTAAATCTGACCGAGGAGGTGGAGCTCCCAGAGGTGGAGGAAGAGGTGGAACTTCTGCTG 1480
Query 1271 GCCGTGGACGAGAAAGAAATAGATCTAACTTCCGAGGAGAAAGAGGTGGCTTTAGAGGGGGCCGTGGAGGAGCA 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCCGTGGACGAGAAAGAAATAGATCTAACTTCCGAGGAGAAAGAGGTGGCTTTAGAGGGGGCCGTGGAGGAGCA 1554
Query 1345 CACAGAGGTGGCTTTCCACCTCGA-------------------------------------------------- 1368
||||||||||||||||||||||||
Sbjct 1555 CACAGAGGTGGCTTTCCACCTCGATAATTGTTGAAGACATTGAACCTATTCATCCTCCTCTAACCTTCTTTATT 1628
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 1629 GTAATTAAATTTCAAGTGGGAGACTTAACTTTAGAACTCACTTCCAGCTTGCACTTTGCTTTAATTTCTCTGAG 1702
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 1703 CTGCAAGAATGTCTTAGCGAGCCTTGCTTGCAGTTGTCACACACACTGTCTGGTTTTTTTCAGGATAAATGAAT 1776
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 1777 GATTCTGCCTTTTGTTATGTGCGTGAACAGAATGGAACAACTCAAGTAGCTTCATCTTCAGAGACTGAATTTAT 1850
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 1851 TCTGATAGACTTCAGCTAATTACAAAGGATTTTGCTAATTTTTGGGAATAAATAATGGAAAAAGATCCAGTCTG 1924
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 1925 TGGTATCATGCTAGTGCTGACAGGGCCTTGATAGAATAGAGTTGGAAAAGATGGTAAGCTTTTGTCAGGGTTTT 1998
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 1999 AACATTTTCTTGATGAAACAATAAAAAGAGGTAAGCTTTTTTCTTCTTTTTTTTTAAGTTTTAAATAAACTCAG 2072
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2073 ATATAATTTGAATACTGAAGAAATTAAGAGACTTTGAACAAAAACTCTTCCCAAATCTAAATTTGATAGGGGAG 2146
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2147 GTGGAGATTCCAGGGGTGGGTGAAAGAAGAGATAGAACTTAGCAGGCAGACTTAAAAAAAAAAAAAAAGTTTAT 2220
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2221 CATCATAATCTCAATTTTGTGGCTATGACTCCTAATCACGCTTCCTAAGAAGCAAAGGAGGACAAATATTCATG 2294
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2295 TGCTAGATAGCACTGTGGTGTGGACTTGAACTTGGATTGACCTTAAATTTTATATTCCTCAAATAAAAGAGAGG 2368
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2369 CAGCGACAAGATACCTCATTATCAGATGCTTGGTTTATACATTTTGGGACTAAAATACTTGGTGATGAAATGAC 2442
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2443 ATACACCTTTAAACTTGTTATGGAGATAGTTTAATGTAAAACCAACTACGGAAAACCCTCAACTTAAGGATACA 2516
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2517 GCTTGGAAATTGGAACTGCAATTGCCTTTTATTAAAACCATATGGTGTGATGTTTGTTTTTAAAATTATATAAG 2590
Query 1369 -------------------------------------------------------------------------- 1368
Sbjct 2591 ACTTTATGCTGTCACTTCTCTTGCTGTACTGTAATTCATGTTTTAAATGAATTTGATAATGAAATTATACTATT 2664
Query 1369 ----------------------------------------------------------------- 1368
Sbjct 2665 ATCATTCTTGATGAATACTTTTCTTATTTTTATGATTTTTCTAATGAAACTTTAAACTTTTGAGA 2729
