Nucleotide Global Alignment

Description

• Query: TRCN0000468471
• Subject: XM_011539655.1
• Aligned Length: 1449
• Identities: 886
• Gaps: 555

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATCCCAGGGGTATCTTGAAGGCATTTCCCAAGCGGCAGAAAATTCATGCTGATGCATCATCAAAAGTACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAAAGATTCCTAGGAGGGAAGAGGGAGAAGAAGCAGAAGAGTGGCTGAGCTCCCTTCGGGCCCATGTTGTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACTGGCATTGGACGAGCCCGGGCAGAACTCTTTGAGAAGCAGATTGTTCAGCATGGCGGCCAGCTATGCCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCCAGGGCCCAGGTGTCACTCACATTGTGGTGGATGAAGGCATGGACTATGAGCGAGCCCTCCGCCTTCTCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTACCCCAGCTGCCCCCGGGTGCTCAGCTGGTGAAGTCAGCCTGGCTGAGCTTGTGCCTTCAGGAGAGGAGGC  370

Query    1  ----------------AT---GCATCATCA-------AAAGTACTTG-------CAAAG---------------  26
                            ||   |||||.|||       .|.|||||||       ||.||               
Sbjct  371  TGGTGGATGTAGCTGGATTCAGCATCTTCATCCCCAGTAGGTACTTGGACCATCCACAGCCCAGCAAGGCAGAG  444

Query   27  ------------ATTCCT----------AGGAGG----------------------------------------  38
                        ||||||          |.||||                                        
Sbjct  445  CAGGATGCTTCTATTCCTCCTGGCACCCATGAGGCCCTGCTTCAGACAGCCCTTTCTCCTCCTCCTCCTCCCAC  518

Query   39  ----------------------------GAAGAGGGA------------------------------GAAGAAG  54
                                        .||||||.|                              ||.||||
Sbjct  519  CAGGCCTGTGTCTCCTCCCCAAAAGGCAAAAGAGGCACCAAACACCCAAGCCCAGCCCATCTCTGATGATGAAG  592

Query   55  C------------AGA-----AGGAGGCCTGCAGTATCCCTGGGATTGGGAAGCGGATGGCTGAGAAAATCATA  111
            |            |||     |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAGTGATGGGGAAGAAACCCAGGAGGCCTGCAGTATCCCTGGGATTGGGAAGCGGATGGCTGAGAAAATCATA  666

Query  112  GAGATCCTGGAGAGCGGGCATTTGCGGAAGCTGGACCATATCAGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTC  185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGATCCTGGAGAGCGGGCATTTGCGGAAGCTGGACCATATCAGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTC  740

Query  186  CAACATCTGGGGAGCTGGGACCAAGACTGCCCAGATGTGGTACCAACAGGGCTTCCGAAGTCTGGAAGACATCC  259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAACATCTGGGGAGCTGGGACCAAGACTGCCCAGATGTGGTACCAACAGGGCTTCCGAAGTCTGGAAGACATCC  814

Query  260  GCAGCCAGGCCTCCCTGACAACCCAGCAGGCCATCGGCCTGAAGCATTACAGTGACTTCCTGGAACGTATGCCC  333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCAGCCAGGCCTCCCTGACAACCCAGCAGGCCATCGGCCTGAAGCATTACAGTGACTTCCTGGAACGTATGCCC  888

Query  334  AGGGAGGAGGCTACAGAGATTGAGCAGACAGTCCAGAAAGCAGCCCAGGCCTTTAACTCTGGGCTGCTGTGTGT  407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGGAGGAGGCTACAGAGATTGAGCAGACAGTCCAGAAAGCAGCCCAGGCCTTTAACTCTGGGCTGCTGTGTGT  962

Query  408  GGCATGTGGTTCATACCGACGGGGAAAGGCGACCTGTGGTGATGTCGACGTGCTCATCACTCACCCAGATGGCC  481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCATGTGGTTCATACCGACGGGGAAAGGCGACCTGTGGTGATGTCGACGTGCTCATCACTCACCCAGATGGCC  1036

Query  482  GGTCCCACCGGGGTATCTTCAGCCGCCTCCTTGACAGTCTTCGGCAGGAAGGGTTCCTCACAGATGACTTGGTG  555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGTCCCACCGGGGTATCTTCAGCCGCCTCCTTGACAGTCTTCGGCAGGAAGGGTTCCTCACAGATGACTTGGTG  1110

Query  556  AGCCAAGAGGAGAATGGTCAGCAACAGAAGTACTTGGGGGTGTGCCGGCTCCCAGGGCCAGGGCGGCGGCACCG  629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGCCAAGAGGAGAATGGTCAGCAACAGAAGTACTTGGGGGTGTGCCGGCTCCCAGGGCCAGGGCGGCGGCACCG  1184

Query  630  GCGCCTGGACATCATCGTGGTGCCCTATAGCGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCACACT  703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCGCCTGGACATCATCGTGGTGCCCTATAGCGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCACACT  1258

Query  704  TCAACCGCTCCATGCGAGCCCTGGCCAAAACCAAGGGCATGAGTCTGTCAGAACATGCCCTCAGCACTGCTGTG  777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCAACCGCTCCATGCGAGCCCTGGCCAAAACCAAGGGCATGAGTCTGTCAGAACATGCCCTCAGCACTGCTGTG  1332

Query  778  GTCCGGAACACCCATGGCTGCAAGGTGGGGCCTGGCCGAGTGCTGCCCACTCCCACTGAGAAGGATGTCTTCAG  851
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GTCCGGAACACCCATGGCTGCAAGGTGGGGCCTGGCCGAGTGCTGCCCACTCCCACTGAGAAGGATGTCTTCAG  1406

Query  852  GCTCTTAGGCCTCCCCTACCGAGAACCTGCTGAGCGGGACTGG  894
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCTCTTAGGCCTCCCCTACCGAGAACCTGCTGAGCGGGACTGG  1449