Nucleotide Global Alignment

Description

• Query: TRCN0000468471
• Subject: XM_011539656.1
• Aligned Length: 1428
• Identities: 882
• Gaps: 534

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATCCCAGGGGTATCTTGAAGGCATTTCCCAAGCGGCAGAAAATTCATGCTGATGCATCATCAAAAGTACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAAAGATTCCTAGGAGGGAAGAGGGAGAAGAAGCAGAAGAGTGGCTGAGCTCCCTTCGGGCCCATGTTGTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACTGGCATTGGACGAGCCCGGGCAGAACTCTTTGAGAAGCAGATTGTTCAGCATGGCGGCCAGCTATGCCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCCAGGGCCCAGGTGTCACTCACATTGTGGTGGATGAAGGCATGGACTATGAGCGAGCCCTCCGCCTTCTCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTACCCCAGCTGCCCCCGGGTGCTCAGCTGGTGAAGTCAGCCTGGCTGAGCTTGTGCCTTCAGGAGAGGAGGC  370

Query    1  ----------------AT---GCATCATCA-------AAAGTACTTG-------CAAAG---------------  26
                            ||   |||||.|||       .|.|||||||       ||.||               
Sbjct  371  TGGTGGATGTAGCTGGATTCAGCATCTTCATCCCCAGTAGGTACTTGGACCATCCACAGCCCAGCAAGGCAGAG  444

Query   27  ------------ATTCCT----------AGGAGG----------------------------------------  38
                        ||||||          |.||||                                        
Sbjct  445  CAGGATGCTTCTATTCCTCCTGGCACCCATGAGGCCCTGCTTCAGACAGCCCTTTCTCCTCCTCCTCCTCCCAC  518

Query   39  -------------------GAAGAGGGAGAAGAAGCA--------------GAAGGAGGCCTGCAGTATCCCTG  79
                               .||.|||.|.||||.|||              ..|||||||||||||||||||||
Sbjct  519  CAGGCCTGTGTCTCCTCCCCAAAAGGCAAAAGAGGCACCAAACACCCAAGCCCAGGAGGCCTGCAGTATCCCTG  592

Query   80  GGATTGGGAAGCGGATGGCTGAGAAAATCATAGAGATCCTGGAGAGCGGGCATTTGCGGAAGCTGGACCATATC  153
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGATTGGGAAGCGGATGGCTGAGAAAATCATAGAGATCCTGGAGAGCGGGCATTTGCGGAAGCTGGACCATATC  666

Query  154  AGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTCCAACATCTGGGGAGCTGGGACCAAGACTGCCCAGATGTGGTA  227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGTGAGAGCGTGCCTGTCTTGGAGCTCTTCTCCAACATCTGGGGAGCTGGGACCAAGACTGCCCAGATGTGGTA  740

Query  228  CCAACAGGGCTTCCGAAGTCTGGAAGACATCCGCAGCCAGGCCTCCCTGACAACCCAGCAGGCCATCGGCCTGA  301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCAACAGGGCTTCCGAAGTCTGGAAGACATCCGCAGCCAGGCCTCCCTGACAACCCAGCAGGCCATCGGCCTGA  814

Query  302  AGCATTACAGTGACTTCCTGGAACGTATGCCCAGGGAGGAGGCTACAGAGATTGAGCAGACAGTCCAGAAAGCA  375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCATTACAGTGACTTCCTGGAACGTATGCCCAGGGAGGAGGCTACAGAGATTGAGCAGACAGTCCAGAAAGCA  888

Query  376  GCCCAGGCCTTTAACTCTGGGCTGCTGTGTGTGGCATGTGGTTCATACCGACGGGGAAAGGCGACCTGTGGTGA  449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCCCAGGCCTTTAACTCTGGGCTGCTGTGTGTGGCATGTGGTTCATACCGACGGGGAAAGGCGACCTGTGGTGA  962

Query  450  TGTCGACGTGCTCATCACTCACCCAGATGGCCGGTCCCACCGGGGTATCTTCAGCCGCCTCCTTGACAGTCTTC  523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGTCGACGTGCTCATCACTCACCCAGATGGCCGGTCCCACCGGGGTATCTTCAGCCGCCTCCTTGACAGTCTTC  1036

Query  524  GGCAGGA---------------------AGGGTTCCTCACAGATGACTTGGTGAGCCAAGAGGAGAATGGTCAG  576
            |||||||                     ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGCAGGAAGCAGTCCCCTCTGTTGGGCCAGGGTTCCTCACAGATGACTTGGTGAGCCAAGAGGAGAATGGTCAG  1110

Query  577  CAACAGAAGTACTTGGGGGTGTGCCGGCTCCCAGGGCCAGGGCGGCGGCACCGGCGCCTGGACATCATCGTGGT  650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CAACAGAAGTACTTGGGGGTGTGCCGGCTCCCAGGGCCAGGGCGGCGGCACCGGCGCCTGGACATCATCGTGGT  1184

Query  651  GCCCTATAGCGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCACACTTCAACCGCTCCATGCGAGCCC  724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCCCTATAGCGAGTTTGCCTGTGCCCTGCTCTACTTCACCGGCTCTGCACACTTCAACCGCTCCATGCGAGCCC  1258

Query  725  TGGCCAAAACCAAGGGCATGAGTCTGTCAGAACATGCCCTCAGCACTGCTGTGGTCCGGAACACCCATGGCTGC  798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGGCCAAAACCAAGGGCATGAGTCTGTCAGAACATGCCCTCAGCACTGCTGTGGTCCGGAACACCCATGGCTGC  1332

Query  799  AAGGTGGGGCCTGGCCGAGTGCTGCCCACTCCCACTGAGAAGGATGTCTTCAGGCTCTTAGGCCTCCCCTACCG  872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AAGGTGGGGCCTGGCCGAGTGCTGCCCACTCCCACTGAGAAGGATGTCTTCAGGCTCTTAGGCCTCCCCTACCG  1406

Query  873  AGAACCTGCTGAGCGGGACTGG  894
            ||||||||||||||||||||||
Sbjct 1407  AGAACCTGCTGAGCGGGACTGG  1428