Nucleotide Global Alignment
Description
- Query:
- TRCN0000468519
- Subject:
- XM_017006187.1
- Aligned Length:
- 6711
- Identities:
- 491
- Gaps:
- 6216
Alignment
Query 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
Query 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
Query 149 CACCCAATAGAG-------------------------------------------------------------- 160
||||||||||||
Sbjct 149 CACCCAATAGAGAGAATGCATCTACTCATGCCTCGAAATCTCCTGACAGTGTTAATGGAAGTGAACCAAGCATT 222
Query 161 ----AGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCTTTGTTTCG 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTCAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCTTTGTTTCG 296
Query 231 AAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAGAGAATCCC 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAGAGAATCCC 370
Query 305 TGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGGCTGAAGAC 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGGCTGAAGAC 444
Query 379 TTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGAAGCTTAAG 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGAAGCTTAAG 518
Query 453 TAGCTACAGGGGAAAATATTCTGAG------TCATGGCTCCGA-TC-------TTCATCT-------------- 498
||||||||||||||||||||||||| |.|.| ||.|| || .||| ||
Sbjct 519 TAGCTACAGGGGAAAATATTCTGAGGGTATATTAAG--TCAGAGTCAGGATAAATCA-CTTCGGAGAATAGCAG 589
Query 499 -------------------------------------------------------------------------- 498
Sbjct 590 AATTAAGAGAGGAGCTCCAAATGGACCAGCAGGCAAAGAAACATCTGCAAGAGGAGTTTGATGCATCTTTAGAG 663
Query 499 -------------------------------------------------------------------------- 498
Sbjct 664 GAGAAAGATCAGTATATCAGTGTTCTCCAAACTCAGGTTTCTCTACTGAAACAACGATTACGAAATGGCCCGAT 737
Query 499 -------------------------------------------------------------------------- 498
Sbjct 738 GAATGTTGATGTACTGAAACCACTTCCTCAGCTGGAACCACAGGCTGAAGTCTTCACTAAAGAAGAGAATCCAG 811
Query 499 -------------------------------------------------------------------------- 498
Sbjct 812 AAAGTGATGGAGAGCCAGTAGTGGAAGATGGAACTTCTGTAAAAACACTGGAAACACTCCAGCAAAGAGTGAAG 885
Query 499 -------------------------------------------------------------------------- 498
Sbjct 886 CGTCAAGAGAACCTACTTAAGCGTTGTAAGGAAACAATTCAGTCACATAAGGAACAATGTACACTATTAACTAG 959
Query 499 -------------------------------------------------------------------------- 498
Sbjct 960 TGAAAAAGAAGCTCTGCAAGAACAACTGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGACCTTCATATGG 1033
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1034 CCGAGAAGACTAAACTTATCACTCAGTTGCGTGATGCAAAGAACTTAATTGAACAGCTTGAACAAGATAAGGGA 1107
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1108 ATGGTAATCGCAGAGACAAAACGTCAGATGCATGAAACCCTGGAAATGAAAGAAGAAGAAATTGCTCAACTCCG 1181
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1182 TAGTCGCATCAAACAGATGACTACCCAGGGAGAGGAATTACGGGAACAGAAAGAAAAGTCCGAAAGAGCTGCTT 1255
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1256 TTGAGGAACTTGAAAAAGCTTTGAGTACAGCCCAAAAAACAGAGGAAGCACGGAGAAAACTGAAGGCAGAAATG 1329
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1330 GATGAACAAATAAAAACTATCGAAAAAACAAGTGAGGAGGAACGCATCAGTCTTCAACAGGAATTAAGTCGGGT 1403
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1404 GAAACAGGAGGTTGTTGATGTAATGAAAAAATCCTCAGAAGAACAAATTGCTAAGCTACAGAAGCTTCATGAAA 1477
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1478 AGGAGCTGGCCAGAAAAGAGCAGGAACTGACCAAGAAGCTTCAGACCCGAGAAAGGGAATTTCAGGAACAAATG 1551
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1552 AAAGTAGCTCTTGAAAAGAGTCAATCAGAATATTTGAAGATCAGCCAAGAAAAAGAACAGCAAGAATCTTTGGC 1625
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1626 CCTAGAAGAGTTAGAGTTGCAGAAAAAAGCAATCCTCACAGAAAGTGAAAATAAACTTCGGGACCTTCAGCAAG 1699
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1700 AAGCAGAGACTTACAGAACTAGAATTCTTGAATTGGAAAGTTCTTTGGAAAAAAGCTTACAAGAAAACAAAAAT 1773
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1774 CAGTCAAAAGATTTGGCTGTTCATCTGGAAGCTGAAAAAAATAAGCACAATAAGGAGATTACAGTCATGGTTGA 1847
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1848 AAAACACAAGACAGAATTGGAAAGCCTTAAGCATCAGCAGGATGCCCTTTGGACTGAAAAACTCCAAGTCTTAA 1921
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1922 AGCAACAATATCAGACTGAAATGGAAAAACTTAGGGAAAAGTGTGAACAAGAAAAAGAAACATTGTTGAAAGAC 1995
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1996 AAAGAGATTATCTTCCAGGCCCACATAGAAGAAATGAATGAAAAGACTTTAGAAAAGCTTGATGTGAAGCAAAC 2069
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2070 AGAACTAGAATCATTATCTTCTGAACTGTCAGAAGTATTAAAAGCCCGTCACAAACTAGAAGAGGAACTTTCTG 2143
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2144 TTCTGAAAGATCAAACAGATAAAATGAAGCAGGAATTAGAGGCCAAGATGGATGAACAGAAAAATCATCACCAG 2217
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2218 CAGCAAGTTGACAGTATCATTAAAGAACACGAGGTATCTATCCAGAGGACTGAGAAGGCATTAAAAGATCAAAT 2291
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2292 TAATCAACTTGAGCTTCTCTTGAAGGAAAGGGACAAGCATTTGAAAGAGCATCAGGCTCATGTAGAAAATTTAG 2365
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2366 AGGCAGATATTAAAAGGTCTGAAGGGGAACTCCAGCAGGCATCTGCTAAGCTGGACGTTTTTCAGTCTTACCAG 2439
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2440 AGTGCCACACATGAGCAGACAAAAGCATATGAGGAACAGTTGGCCCAATTGCAGCAGAAGTTGTTGGATTTGGA 2513
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2514 AACAGAAAGAATTCTTCTTACCAAACAGGTTGCTGAAGTTGAAGCACAAAAGAAAGATGTTTGTACTGAGTTAG 2587
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2588 ATGCTCACAAAATCCAGGTGCAGGACTTAATGCAGCAACTTGAAAAACAAAATAGTGAAATGGAGCAAAAAGTA 2661
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2662 AAATCTTTAACCCAAGTCTATGAGTCCAAACTTGAAGATGGTAACAAAGAACAGGAACAGACAAAGCAAATCTT 2735
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2736 GGTGGAAAAGGAAAATATGATTTTACAAATGAGAGAAGGACAGAAGAAAGAAATTGAGATACTCACACAGAAAT 2809
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2810 TGTCAGCCAAGGAGGACAGTATTCATATTTTGAATGAGGAATATGAAACCAAATTTAAAAACCAAGAAAAAAAG 2883
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2884 ATGGAAAAAGTTAAGCAGAAAGCAAAGGAGATGCAAGAAACGTTAAAGAAAAAATTACTGGATCAGGAAGCCAA 2957
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2958 ACTTAAGAAAGAGCTTGAAAATACTGCTCTAGAGCTTAGTCAGAAAGAAAAACAGTTTAATGCCAAAATGCTGG 3031
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3032 AAATGGCACAGGCTAACTCAGCTGGAATCAGTGATGCAGTGTCAAGACTGGAAACAAACCAAAAAGAACAAATA 3105
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3106 GAAAGTCTTACTGAGGTTCATCGACGAGAACTCAATGATGTCATATCAATCTGGGAAAAGAAACTTAATCAGCA 3179
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3180 AGCTGAAGAACTTCAGGAAATACATGAAATCCAATTACAGGAAAAAGAACAAGAGGTAGCAGAACTGAAACAAA 3253
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3254 AGATCCTCCTATTTGGGTGTGAAAAAGAAGAGATGAACAAGGAAATAACATGGCTGAAGGAAGAAGGTGTTAAG 3327
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3328 CAGGATACAACATTAAATGAATTACAGGAACAGTTAAAGCAGAAGTCTGCCCATGTGAATTCTCTTGCACAAGA 3401
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3402 TGAAACTAAACTGAAAGCTCATCTTGAAAAGCTAGAGGTTGACTTGAATAAGTCTCTGAAGGAAAATACTTTTC 3475
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3476 TTCAAGAGCAGCTAGTTGAACTGAAGATGCTGGCAGAAGAAGATAAGCGGAAGGTTTCTGAGTTGACTAGCAAG 3549
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3550 TTGAAAACCACAGATGAAGAATTCCAGAGTTTGAAATCTTCACATGAAAAAAGTAACAAAAGCCTAGAGGACAA 3623
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3624 GAGCTTGGAATTTAAAAAACTGTCTGAGGAACTAGCGATTCAGCTAGATATTTGCTGTAAGAAAACCGAAGCCT 3697
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3698 TATTAGAAGCTAAAACAAATGAGCTAATCAACATTAGTAGTAGTAAAACTAATGCCATTCTTTCTAGGATTTCT 3771
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3772 CATTGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACAGTTTCTGAATTAGAAGC 3845
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3846 ACAACTTAGACAGTTGACAGAGGAGCAAAATACACTAAATATTTCTTTTCAACAGGCTACTCATCAGTTAGAAG 3919
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3920 AAAAAGAAAATCAAATTAAGAGCATGAAGGCTGATATTGAAAGTCTTGTAACAGAAAAAGAAGCCTTACAGAAG 3993
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3994 GAAGGAGGCAATCAGCAACAGGCTGCTTCTGAAAAGGAGTCTTGTATAACACAGTTGAAGAAAGAGTTATCTGA 4067
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4068 AAACATCAATGCTGTCACATTGATGAAAGAAGAGCTTAAAGAAAAAAAAGTTGAGATTAGCAGTCTTAGTAAAC 4141
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4142 AACTAACTGATTTGAATGTTCAGCTTCAAAATAGCATCAGCCTATCCGAAAAAGAAGCAGCCATTTCATCACTA 4215
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4216 AGAAAGCAGTATGATGAAGAAAAATGTGAATTGCTGGATCAGGTGCAAGATTTATCTTTTAAAGTTGACACTCT 4289
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4290 GAGTAAAGAGAAAATTTCTGCTCTTGAGCAGGTAGATGACTGGTCCAATAAATTCTCAGAATGGAAGAAGAAAG 4363
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4364 CACAGTCAAGATTTACACAGCATCAAAACACTGTTAAAGAATTGCAGATCCAGCTTGAGTTAAAATCAAAGGAA 4437
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4438 GCTTATGAAAAGGATGAGCAGATAAATTTATTGAAGGAAGAGCTTGATCAGCAAAATAAAAGATTTGATTGTTT 4511
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4512 AAAGGGTGAAATGGAAGACGACAAGAGCAAGATGGAGAAAAAGGAGTCTAATTTAGAAACAGAGTTAAAGTCTC 4585
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4586 AAACAGCAAGAATTATGGAATTAGAGGACCATATTACCCAGAAAACTATTGAAATAGAGTCCTTAAATGAAGTT 4659
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4660 CTTAAAAATTACAATCAACAAAAGGATATTGAACACAAAGAATTGGTTCAGAAACTTCAACATTTTCAAGAGTT 4733
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4734 AGGAGAAGAAAAGGACAACAGGGTTAAAGAAGCTGAAGAAAAAATCTTAACACTTGAAAACCAAGTTTATTCCA 4807
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4808 TGAAAGCTGAACTTGAAACTAAGAAGAAAGAATTAGAACATGTGAATTTAAGTGTGAAAAGCAAAGAGGAGGAG 4881
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4882 TTAAAGGCATTGGAAGATAGGCTTGAGTCAGAAAGTGCTGCAAAATTAGCAGAGTTGAAGAGAAAAGCTGAACA 4955
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4956 AAAAATTGCTGCCATTAAGAAGCAGTTGTTATCTCAAATGGAAGAGAAAGAAGAACAGTATAAAAAAGGTACAG 5029
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5030 AAAGCCATTTGAGTGAGCTAAATACAAAATTGCAGGAAAGAGAAAGGGAAGTTCACATCTTGGAAGAAAAACTT 5103
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5104 AAGTCAGTGGAAAGTTCACAGTCAGAAACATTAATTGTACCCAGATCAGCAAAAAATGTGGCAGCATATACTGA 5177
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5178 ACAAGAAGAAGCAGATTCCCAAGGCTGTGTGCAGAAGACATATGAAGAAAAAATCAGTGTTTTACAAAGAAACT 5251
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5252 TAACTGAAAAAGAAAAGCTATTGCAGAGGGTAGGGCAGGAAAAAGAAGAGACAGTTTCTTCTCATTTTGAAATG 5325
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5326 CGATGCCAATACCAGGAGCGCTTAATAAAGCTAGAACATGCTGAGGCAAAGCAACATGAAGATCAAAGTATGAT 5399
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5400 AGGTCATCTTCAAGAGGAGCTTGAAGAAAAAAACAAGAAATATTCCTTGATAGTAGCCCAGCATGTGGAAAAAG 5473
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5474 AAGGAGGTAAAAATAACATACAGGCAAAGCAAAACTTGGAAAATGTGTTTGACGACGTCCAGAAAACCCTCCAG 5547
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5548 GAGAAGGAACTAACCTGTCAGATTTTGGAGCAAAAGATAAAAGAGCTGGATTCCTGCTTAGTAAGACAGAAAGA 5621
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5622 AGTACATAGAGTTGAAATGGAAGAGTTGACCTCAAAATATGAAAAATTACAGGCTTTACAACAGATGGATGGAA 5695
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5696 GAAATAAACCCACAGAACTTTTGGAAGAAAACACTGAAGAAAAGTCCAAATCACATTTGGTCCAACCCAAATTG 5769
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5770 CTTAGTAACATGGAAGCCCAGCACAATGATCTGGAGTTTAAATTAGCCGGGGCAGAACGGGAGAAACAGAAACT 5843
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5844 GGGCAAGGAGATTGTTAGATTGCAGAAAGACCTTCGAATGTTGAGAAAGGAGCATCAGCAAGAATTGGAAATAC 5917
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5918 TAAAGAAAGAATATGATCAAGAAAGGGAAGAGAAAATCAAACAGGAGCAGGAAGATCTTGAACTGAAGCACAAT 5991
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5992 TCCACATTAAAACAGCTGATGAGGGAGTTTAATACACAGCTGGCACAAAAGGAACAAGAGCTGGAAATGACCAT 6065
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6066 AAAAGAAACTATCAATAAGGCCCAGGAGGTGGAGGCTGAACTTTTAGAAAGCCATCAAGAAGAGACAAATCAGT 6139
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6140 TACTTAAAAAAATTGCTGAGAAAGATGATGATCTAAAACGAACAGCCAAAAGATATGAAGAAATCCTTGATGCT 6213
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6214 CGTGAAGAAGAAATGACTGCAAAAGTAAGGGACCTGCAGACTCAACTTGAGGAGCTGCAGAAGAAATACCAGCA 6287
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6288 AAAGCTAGAGCAGGAGGAGAACCCTGGCAATGATAATGTAACAATTATGGAGCTACAGACACAGCTAGCACAGA 6361
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6362 AGACGACTTTAATCAGTGATTCGAAATTGAAAGAGCAAGAGTTCAGAGAACAGATTCACAATTTAGAAGACCGT 6435
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6436 TTGAAGAAATATGAAAAGAATGTATATGCAACAACTGTGGGGACACCTTACAAAGGTGGCAATTTGTACCATAC 6509
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6510 GGATGTCTCACTCTTTGGAGAACCTACCGAATTTGAGTATTTGCGAAAAGTGCTTTTTGAGTATATGATGGGTC 6583
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6584 GTGAGACTAAGACCATGGCAAAAGTTATAACCACCGTACTGAAGTTCCCTGATGATCAGACTCAGAAAATTTTG 6657
Query 499 --------------------------------------------------- 498
Sbjct 6658 GAAAGAGAAGATGCTCGGCTGATGTTTACTTCACCTCGCAGTGGTATCTTC 6708
