Nucleotide Global Alignment

Description

Query:
TRCN0000468576
Subject:
NR_110145.1
Aligned Length:
2134
Identities:
1332
Gaps:
790

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGAAGAAAAATGATGATAAAGTAAAAGGCCAGTAACTGGCAGCCACATGTTATGCAAACATTCTCCCCTCTGT  74

Query    1  ---------------------------------------------------ATGGTCACTTCCTCTTTTCCAAT  23
                                                               |||||||||||||||||||||||
Sbjct   75  AAATACTACATGAATGTTATTTTTGCTTTCAGAAATCACTAAACCTTGGCCATGGTCACTTCCTCTTTTCCAAT  148

Query   24  CTCTGTGGCAGTTTTTGCCCTAATAACCCTGCAGGTTGGTACTCAGGACAGTTTTATAGCTGCAGTGTATGAAC  97
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTCTGTGGCAGTTTTTGCCCTAATAACCCTGCAGGTTGGTACTCAGGACAGTTTTATAGCTGCAGTGTATGAAC  222

Query   98  ATGCTGTCATTTTGCCAAATAAAACAGAAACACCAGTTTCTCAGGAGGATGCCTTGAATCTCATGAACGAGAAT  171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGCTGTCATTTTGCCAAATAAAACAGAAACACCAGTTTCTCAGGAGGATGCCTTGAATCTCATGAACGAGAAT  296

Query  172  ATAGACATTCTGGAGACAGCGATCAAGCAGGCAGCTGAGCAGGGTGCTCGAATCATTGTGACTCCAGAAGATGC  245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATAGACATTCTGGAGACAGCGATCAAGCAGGCAGCTGAGCAGGGTGCTCGAATCATTGTGACTCCAGAAGATGC  370

Query  246  ACTTTATGGATGGAAATTTACCAGGGAAACTGTTTTCCCTTATCTGGAGGATATCCCAGACCCTCAGGTGAACT  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACTTTATGGATGGAAATTTACCAGGGAAACTGTTTTCCCTTATCTGGAGGATATCCCAGACCCTCAGGTGAACT  444

Query  320  GGATTCCGTGTCAAGACCCCCACAGATTTGGTCACACACCAGTACAAGCAAGACTCAGCTGCCTGGCCAAGGAC  393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGATTCCGTGTCAAGACCCCCACAGATTTGGTCACACACCAGTACAAGCAAGACTCAGCTGCCTGGCCAAGGAC  518

Query  394  AACTCTATCTATGTCTTGGCAAATTTGGGGGACAAAAAGCCATGTAATTCCCGTGACTCCACATGTCCTCCTAA  467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AACTCTATCTATGTCTTGGCAAATTTGGGGGACAAAAAGCCATGTAATTCCCGTGACTCCACATGTCCTCCTAA  592

Query  468  TGGCTACTTTCAATACAATACCAATGTGGTGTATAATACAGAAGGAAAACTCGTGGCACGTTACCATAAGTACC  541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  593  TGGCTACTTTCAATACAATACCAATGTGGTGTATAATACAGAAGGAAAACTCGTGGCACGTTACCATAAG----  662

Query  542  ACCTGTACTCTGAGCCTCAGTTTAATGTCCCTGAAAAGCCGGAGTTGGTGACTTTCAACACCGCATTTGGAAGG  615
                                                       ||.||       |||.|              
Sbjct  663  -------------------------------------------GTGGG-------CAAGA--------------  672

Query  616  TTTGGCATTTTCACGTGCTTTGATATATTCTTCTATGATCCTGGTGTTACCCTGGTGAAAGATTTCCATGTGGA  689
                     .||||      |||.||                                                
Sbjct  673  ---------GTCAC------TGAGAT------------------------------------------------  683

Query  690  CACCATACTGTTTCCCACAGCTTGGATGAACGTTTTGCCCCTTTTGACAGCTATTGAATTCCATTCAGCTTGGG  763
                 ||||            |||||||                .|||| |||..||                 
Sbjct  684  -----TACT------------TTGGATG----------------GGACA-CTAAAGA-----------------  706

Query  764  CAATGGGA-ATGGGAGTTAATCTTCTTGTGGCCAACACACATCATGTCAGCCTAAATATGACAGGAAGTGGTAT  836
                |.|| |||                          ||||| |.||| |||.|  .|.||||||||||||||
Sbjct  707  ----GAGAGATG--------------------------ACATC-TCTCA-CCTGA--CTTACAGGAAGTGGTAT  746

Query  837  TTATGCACCAAATGGTCCCAAAGTGTATCATTATGACATGAAGACAGAGTTGGGAAAACTTCTCCTTTCAGAGG  910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  747  TTATGCACCAAATGGTCCCAAAGTGTATCATTATGACATGAAGACAGAGTTGGGAAAACTTCTCCTTTCAGAGG  820

Query  911  TGGATTCACATCCCCTATCCTCGCTTGCCTACCCAACAGCTGTTAATTGGAATGCCTACGCCACCACCATCAAA  984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  821  TGGATTCACATCCCCTATCCTCGCTTGCCTACCCAACAGCTGTTAATTGGAATGCCTACGCCACCACCATCAAA  894

Query  985  CCATTTCCAGTACAGAAAAACACTTTCAGGGGATTTATTTCCAGGGATGGGTTCAACTTCACAGAACTTTTTGA  1058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  895  CCATTTCCAGTACAGAAAAACACTTTCAGGGGATTTATTTCCAGGGATGGGTTCAACTTCACAGAACTTTTTGA  968

Query 1059  AAATGCAGGAAACCTTACAGTCTGTCAAAAGGAGCTTTGCTGTCATTTAAGCTACAGAATGTTACAAAAAGAAG  1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  969  AAATGCAGGAAACCTTACAGTCTGTCAAAAGGAGCTTTGCTGTCATTTAAGCTACAGAATGTTACAAAAAGAAG  1042

Query 1133  AGAATGAAGTATACGTTCTAGGAGCTTTTACAGGATTACATGGCCGAAGGAGAAGAGAGTACTGGCAGGTCTGC  1206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043  AGAATGAAGTATACGTTCTAGGAGCTTTTACAGGATTACATGGCCGAAGGAGAAGAGAGTACTGGCAGGTCTGC  1116

Query 1207  ACAATGCTGAAGTGCAAAACTACTAATTTGACAACTTGTGGACGGCCAGTAGAAACTGCTTCTACAAGATTTGA  1280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1117  ACAATGCTGAAGTGCAAAACTACTAATTTGACAACTTGTGGACGGCCAGTAGAAACTGCTTCTACAAGATTTGA  1190

Query 1281  AATGTTCTCCCTCAGTGGCACATTTGGAACAGAGTATGTTTTTCCTGAAGTGCTACTTACCGAAATTCATCTGT  1354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191  AATGTTCTCCCTCAGTGGCACATTTGGAACAGAGTATGTTTTTCCTGAAGTGCTACTTACCGAAATTCATCTGT  1264

Query 1355  CACCTGGAAAATTTGAGGTGCTGAAAGATGGGCGTTTGGTAAACAAGAATGGATCATCTGGGCCTATACTAACA  1428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265  CACCTGGAAAATTTGAGGTGCTGAAAGATGGGCGTTTGGTAAACAAGAATGGATCATCTGGGCCTATACTAACA  1338

Query 1429  GTGTCACTCTTTGGGAGGTGGTACACAAAGGACTCACTTTACAGCTCATGTGGGACCAGCAATTCAGCAATAAC  1502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339  GTGTCACTCTTTGGGAGGTGGTACACAAAGGACTCACTTTACAGCTCATGTGGGACCAGCAATTCAGCAATAAC  1412

Query 1503  TTACCTGCTAATATTCATATTATTAATGATCATAGCTTTGCAAAATATTGTAATGTTA----------------  1560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct 1413  TTACCTGCTAATATTCATATTATTAATGATCATAGCTTTGCAAAATATTGTAATGTTATAGGGCGTCTCTTTAT  1486

Query 1561  --------------------------------------------------------------------------  1560
                                                                                      
Sbjct 1487  CACTCAGCTTCTGCATCATATGCTTGGCTGAATGTGTTTATCGGCTTCCCAAGTTTACTAAGAAACTTTGAAGG  1560

Query 1561  --------------------------------------------------------------------------  1560
                                                                                      
Sbjct 1561  GCTATTTCAGTAGTATAGACCAGTGAGTCCTAAATATTTTTTCTCATCAATAATTATTTTTTAAGTATTATGAT  1634

Query 1561  --------------------------------------------------------------------------  1560
                                                                                      
Sbjct 1635  AATGTTGTCCATTTTTTTGGCTACTCTGAAATGTTGCAGTGTGGAACAATGGAAAGAGCCTGGGTGTTTGGGTC  1708

Query 1561  --------------------------------------------------------------------------  1560
                                                                                      
Sbjct 1709  AGATAAATGAAGATCAAACTCCAGCTCCAGCCTCATTTGCTTGAGACTTTGTGTGTATGGGGGACTTGTATGTA  1782

Query 1561  --------------------------------------------------------------------------  1560
                                                                                      
Sbjct 1783  TGGGAGTGAGGAGTTTCAGGGCCATTGCAAACATAGCTGTGCCCTTGAAGAGAATAGTAATGATGGGAATTTAG  1856

Query 1561  --------------------------------------------------------------  1560
                                                                          
Sbjct 1857  AGGTTTATGACTGAATTCCCTTTGACATTAAAGACTATTTGAATTCAAAAAAAAAAAAAAAA  1918

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