Nucleotide Global Alignment

Description

Query:
TRCN0000468585
Subject:
NR_136159.1
Aligned Length:
3678
Identities:
1501
Gaps:
2144

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCATGCCCAGTGCCCGCGCGCGCCGCCAGGCTCGCAAGCACCGCGTAGGCCAGCTGGCCGGATCCCGCCGTCTG  74

Query    1  ---------------------------------------------------------ATGAATGAAC----ACT  13
                                                                     |||   ||||    |.|
Sbjct   75  TCATGGCGGCCCCCATCCTGAAAGATGTAGTGGCCTATGTTGAAGTGTGGTCATCCAATG---GAACAGAAAAT  145

Query   14  TAT--CAAGCCTAATTAAAAAAAAACGTAAATG--TATGCAGCCCAAGGATTTTAA----TTTTAAAACACCAG  79
            |||  .|||.| |.|||.||.|.|.|.|  .||  ||||..|.|.|||| |||.||    ||||||.|.||.||
Sbjct  146  TATTCAAAGAC-ATTTACAACACAGCTT--GTGGATATGGGGGCAAAGG-TTTCAAAAACTTTTAACAAACAAG  215

Query   80  AAA--------ATGATAAGAGAT-------------------------TTCAGAAGAAA-------------TT  107
            .||        ||..|.|.||||                         .||||||||.|             ||
Sbjct  216  TAACTCACGTTATCTTCAAAGATGGCTACCAGAGCACTTGGGACAAAGCTCAGAAGAGAGGCGTAAAGCTCGTT  289

Query  108  T--------------GAGAAAATG-------GCTAAAG----------------------------AGCT----  128
            |              || ||||||       |||..||                            ||||    
Sbjct  290  TCGGTGCTCTGGGTGGA-AAAATGCAGGACAGCTGGAGCACACATTGATGAATCATTGTTCCCTGCAGCTAATA  362

Query  129  -------ACA------AAGGCAAA--AAACAAATCTAGATGATGATGTACCTATTCTCTTATTTGAATCTAATG  187
                   |||      |||.|.||  |||.|||   |.||||||||||||||||||||||||||||||||||||
Sbjct  363  TGAATGAACACTTATCAAGCCTAATTAAAAAAA---AAATGATGATGTACCTATTCTCTTATTTGAATCTAATG  433

Query  188  GTTCATTAATATATACTCCCACAATTGAAATTAATAGTAGTCACCACAGCGCAATGGAGAAGAGATTACAAGAG  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  434  GTTCATTAATATATACTCCCACAATTGAAATTAATAGTAGTCACCACAGCGCAATGGAGAAGAGATTACAAGAG  507

Query  262  ATGAAGGAGAAAAGGGAAAATCTTTCCCCCACCTCTTCCCAAATGATTCAGCAGTCTCATGATAATCCAAGTAA  335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  508  ATGAAGGAGAAAAGGGAAAATCTTTCCCCCACCTCTTCCCAAATGATTCAGCAGTCTCATGATAATCCAAGTAA  581

Query  336  CTCTCTGTGTGAAGCACCTTTGAACATTTCACGTGATACTTTGTGTTCAGATGAATACTTTGCTGGTGGCTTAC  409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  582  CTCTCTGTGTGAAGCACCTTTGAACATTTCACGTGATACTTTGTGTTCAGATGAATACTTTGCTGGTGGCTTAC  655

Query  410  ACTCATCTTTTGATGATCTTTGTGGAAACTCAGGATGTGGAAATCAGGAAAGGAAGTTGGAAGGATCCATTAAT  483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  656  ACTCATCTTTTGATGATCTTTGTGGAAACTCAGGATGTGGAAATCAGGAAAGGAAGTTGGAAGGATCCATTAAT  729

Query  484  GACATTAAAAGTGATGTGTGTATTTCTTCACTTGTATTGAAAGCAAATAATATTCATTCATCACCATCTTTCAC  557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  730  GACATTAAAAGTGATGTGTGTATTTCTTCACTTGTATTGAAAGCAAATAATATTCATTCATCACCATCTTTCAC  803

Query  558  TCACCTCGATAAATCAAGTCCTCAGAAATTTCTGAGTAATCTTTCAAAGGAAGAAATAAACTTGCAAAGAAATA  631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  804  TCACCTCGATAAATCAAGTCCTCAGAAATTTCTGAGTAATCTTTCAAAGGAAGAAATAAACTTGCAAAGAAATA  877

Query  632  TTGCAGGTAAAGTAGTCACCCCTCACCAAAAGCAGGCTGCAGGTATGTCTCAGGAGACGTTTGAAGAGAAGTAT  705
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  878  TTGCAGGTAAAGTAGTCACCCCTGACCAAAAGCAGGCTGCAGGTATGTCTCAGGAGACGTTTGAAGAGAAGTAT  951

Query  706  CGTTTGTCTCCTACCTTATCTTCAACAAAAGGCCACCTTTTGATACATTCAAGACCCAGGAGTTCCTCAGTAAA  779
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  952  CGTTTGTCTCCTACCTTATCTTCAACAAAAGGCCACCTTTTGATACATTCAAGACCCAGGAGTTCCTCAGTAAA  1025

Query  780  GAGAAAAAGAGTATCACATGGCTCCCATTCACCTCCGAAGGAAAAATGCAAGAGAAAGAGGAGCACCAGGAGAT  853
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  GAGAAAAAGAGTATCACATGGCTCCCATTCACCTCCGAAGGAAAAATGCAAGAGAAAGAGGAGCACCAGGAGAT  1099

Query  854  CTATCATGCCGAGGCTGCAGCTGTGCAGGTCGGAAGGCAGGCTGCAGCACGTGGCGGGACCTGCCCTGGAGGCT  927
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1100  CTATCATGCCGAGGCTGCAGCTGTGCAGGTCGGAAGACAGGCTGCAGCACGTGGCGGGACCTGCCCTGGAGGCT  1173

Query  928  CTTAGCTGTGGGGAGTCTTCATATGATGACTATTTTTCACCTGATAATCTTAAGGAAAGGTATTCAGAGAATCT  1001
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  CTTAGCTGTGGGGAGTCTTCATATGATGACTATTTTTCACCTGATAATCTTAAGGAAAGGTATTCAGAGAATCT  1247

Query 1002  TCCTCCTGAATCTCAGCTGCCATCAAGCCCTGCTCAGTTGAGCTGCAGAAGTCTTTCTAAGAAGGAGAGAACAA  1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248  TCCTCCTGAATCTCAGCTGCCATCAAGCCCTGCTCAGTTGAGCTGCAGAAGTCTTTCTAAGAAGGAGAGAACAA  1321

Query 1076  GCATATTTGAAATGTCTGATTTTTCCTGCGTTGGCAAAAAAACCAGAACAGTTGACATTACCAATTTCACAGCA  1149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322  GCATATTTGAAATGTCTGATTTTTCCTGCGTTGGCAAAAAAACCAGAACAGTTGACATTACCAATTTCACAGCA  1395

Query 1150  AAAACCATCTCCAGTCCTCGGAAAACTGGAAATGGTGAAGGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCC  1223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396  AAAACCATCTCCAGTCCTCGGAAAACTGGAAATGGTGAAGGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCC  1469

Query 1224  TGAAGAAGCCCTAAGGTGTTGTAGACAGGCTGGGAAAGAAGACGCATGCCCAGAGGGAAATGGCTTTTCTTACA  1297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470  TGAAGAAGCCCTAAGGTGTTGTAGACAGGCTGGGAAAGAAGACGCATGCCCAGAGGGAAATGGCTTTTCTTACA  1543

Query 1298  CCATTGAGGACCCTGCTCTTCCAAAAGGACATGATGATGATTTAACTCCTTTGGAAGGAAGCCTTGAAGAAATG  1371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1544  CCATTGAGGACCCTGCTCTTCCAAAAGGACATGATGATGATTTAACTCCTTTGGAAGGAAGCCTTGAAGAAATG  1617

Query 1372  AAAGAAGCGGTTGGTCTGAAAAGCACACAGAACAAAGGTACCACTTCCAAAATATCAAACTCCTCTGAAGGCGA  1445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618  AAAGAAGCGGTTGGTCTGAAAAGCACACAGAACAAAGGTACCACTTCCAAAATATCAAACTCCTCTGAAGGCGA  1691

Query 1446  AGCCCAGAGTGAACATGAGCCATGTTTTATAGTTGACTGTAACATGGAGACGTCTACAGAAGAGAAGGAAAACT  1519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692  AGCCCAGAGTGAACATGAGCCATGTTTTATAGTTGACTGTAACATGGAGACGTCTACAGAAGAGAAGGAAAACT  1765

Query 1520  TACCCGGAGGATACAGTGGAAGTATG------------------------------------------------  1545
            ||||||||||||||||||||||||||                                                
Sbjct 1766  TACCCGGAGGATACAGTGGAAGTATGTGAATCTCCTTTTCCAAGTCACCTTCGCTAAATAAACATGTAACAGTG  1839

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 1840  CATCCATATTTTAAATTTATCACAACTTTTTCATAACTTATTTCCCCATTTACTCCTCTTTTTACTTAAAGAAT  1913

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 1914  GTGCATTTGATCATTCCAATGATAAACTCTTTAGGAATAGATGACTTGCTGTCTTGTGGAACTTCTAGACTTAT  1987

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 1988  TGGTTAAGTCTGTTAGGAATCTATTTCTCCAAGACTTTTCCTTCTTATAGGTCAAAAGGATAAGTAGTCCATAG  2061

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2062  TATGAATAACTGAGGGGAGTGAAGTCTTTTTCCTTATTCCATTGGAGTCTTGGCGCTGCAGCGTGTGTAAAGAT  2135

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2136  GTATACGATAGAGAGTTTTTTAAAACCTAGGTTCTTAATAGTGAGGCTATTTAAAGAAAGAAATTAAGGTAGAT  2209

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2210  TAAGCCATCGATTGTATCATAGAGAAAGTGTGAAAAACTACTTTTAGAAATCTGTTGTCAATATTGATTTTTGA  2283

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2284  AGAAACTTTGGTCAGTGTTAACTATGAAGAAACATTTAAACATTTTTGATCATTTGTAACAAGCCTTGTTTAAC  2357

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2358  TTGTACTTATTTTGCTTGAAGCATCACTTGAAAAGGTTTACTCCTATTCATAATTTAATTGTAATTATAATAAA  2431

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2432  CCATATCATTTTATTAAAAGTCAAAACAATAAAAAATTTTGCACTTCACAGTTATAAGCACAAATAGGTTCCAG  2505

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2506  CAACCAAAATTGAAGAAATCTTGAACTTTGACCGTCTTTACCTAAAGATTAGGTTAAAATTTGAGTGAGAACGC  2579

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2580  ATTCTCTCTGCATGATTTCTCTGCTCTACAAATGTTTTAACTGCCTCTTTGAAGGTGGAGAAGTCATGGTAGCG  2653

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2654  TTTGAAATCATCACAGACATGTTACATACCTTTTCCTTGAGTATACGCTCCCCAAAATTGTTTCACAAAAAGAA  2727

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2728  TGAAAATAATTTTATGTTTTTGGCCTGCTATTTATATCTTGGCTTTCTGAACATATATTAAATTTGACAAGAAA  2801

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2802  CTGTATTTTATGTTCCATTAGCCTTAGTATGTGTTTTCAAAATATTTATTTTAAAATGTTGACTCAAAAGTTAA  2875

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2876  TATAAAACAATAGATGTGTAAAATTCTTTGGTAGTTAAGAATATCCTGTTCTGAGGTTTACATTCTCCATCTTT  2949

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 2950  CCAGTTTTCACCTTGTGTATTTTTTAAGCTTTTGAATAATAATGACATGGAAATGTAAATTAAGTAGGAAAAAG  3023

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3024  CTGGTAGCAAACAGTGTGGCATGGCCTAAAATCCCCGTGTTGCTGGGAGTGTGCTAGTCCTCGGAAGCAGGTGT  3097

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3098  GTTATGTTCTAGAACACTGCCCCCCTGCGTCGACAGCCTCCGGGGTTGGGGGTAAGTAGAAGGGGGTGAGGGGC  3171

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3172  CAGCACTAGTTGACTCAAGGCACCCTGGTGGGGACGGAGAGGTTTTTTCGCTCAGTGGTGCAGGCCATCAGGCA  3245

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3246  GGGGTGTCCAGGCAGGGCCCGGGTGCAAGAAAACATTCTGTGTGCGCTAGTGCGAGAGGATCTTCTACAGTCAC  3319

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3320  CTGCCTTCATGCCATTACAGACAGACGGGAAGTCACTGGGTTCTAGGACATAAAAAGACCTACATGTTGGCTAG  3393

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3394  CCTAAATCGAACCCTTTTATAGTAATAAAGATTCATCAATGTTTTAAACTGTCCACTGTCAGCCCCCTGGGACT  3467

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3468  CAGGTGAACCAACTCTCTTTGGGAATCTATCTTAGAAGATGAAACCATAAAGCCTTCAGTTTCAATGTCAGGGA  3541

Query 1546  --------------------------------------------------------------------------  1545
                                                                                      
Sbjct 3542  TGCACACTCTATATCTGGTGAAATTATGGAGGGGTGAAAACTTCTGTACAGCAAACTGTACCTCCAAATCTTTA  3615

Query 1546  ----------------------------------------------------  1545
                                                                
Sbjct 3616  ATGTCGAAATAAAGGGCTTTTTGCCATTTCTGTTTTCAGTTCAAAAAAAAAA  3667

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