Nucleotide Global Alignment
Description
- Query:
- TRCN0000468585
- Subject:
- NR_136159.1
- Aligned Length:
- 3678
- Identities:
- 1501
- Gaps:
- 2144
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCATGCCCAGTGCCCGCGCGCGCCGCCAGGCTCGCAAGCACCGCGTAGGCCAGCTGGCCGGATCCCGCCGTCTG 74
Query 1 ---------------------------------------------------------ATGAATGAAC----ACT 13
||| |||| |.|
Sbjct 75 TCATGGCGGCCCCCATCCTGAAAGATGTAGTGGCCTATGTTGAAGTGTGGTCATCCAATG---GAACAGAAAAT 145
Query 14 TAT--CAAGCCTAATTAAAAAAAAACGTAAATG--TATGCAGCCCAAGGATTTTAA----TTTTAAAACACCAG 79
||| .|||.| |.|||.||.|.|.|.| .|| ||||..|.|.|||| |||.|| ||||||.|.||.||
Sbjct 146 TATTCAAAGAC-ATTTACAACACAGCTT--GTGGATATGGGGGCAAAGG-TTTCAAAAACTTTTAACAAACAAG 215
Query 80 AAA--------ATGATAAGAGAT-------------------------TTCAGAAGAAA-------------TT 107
.|| ||..|.|.|||| .||||||||.| ||
Sbjct 216 TAACTCACGTTATCTTCAAAGATGGCTACCAGAGCACTTGGGACAAAGCTCAGAAGAGAGGCGTAAAGCTCGTT 289
Query 108 T--------------GAGAAAATG-------GCTAAAG----------------------------AGCT---- 128
| || |||||| |||..|| ||||
Sbjct 290 TCGGTGCTCTGGGTGGA-AAAATGCAGGACAGCTGGAGCACACATTGATGAATCATTGTTCCCTGCAGCTAATA 362
Query 129 -------ACA------AAGGCAAA--AAACAAATCTAGATGATGATGTACCTATTCTCTTATTTGAATCTAATG 187
||| |||.|.|| |||.||| |.||||||||||||||||||||||||||||||||||||
Sbjct 363 TGAATGAACACTTATCAAGCCTAATTAAAAAAA---AAATGATGATGTACCTATTCTCTTATTTGAATCTAATG 433
Query 188 GTTCATTAATATATACTCCCACAATTGAAATTAATAGTAGTCACCACAGCGCAATGGAGAAGAGATTACAAGAG 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 GTTCATTAATATATACTCCCACAATTGAAATTAATAGTAGTCACCACAGCGCAATGGAGAAGAGATTACAAGAG 507
Query 262 ATGAAGGAGAAAAGGGAAAATCTTTCCCCCACCTCTTCCCAAATGATTCAGCAGTCTCATGATAATCCAAGTAA 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 ATGAAGGAGAAAAGGGAAAATCTTTCCCCCACCTCTTCCCAAATGATTCAGCAGTCTCATGATAATCCAAGTAA 581
Query 336 CTCTCTGTGTGAAGCACCTTTGAACATTTCACGTGATACTTTGTGTTCAGATGAATACTTTGCTGGTGGCTTAC 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 CTCTCTGTGTGAAGCACCTTTGAACATTTCACGTGATACTTTGTGTTCAGATGAATACTTTGCTGGTGGCTTAC 655
Query 410 ACTCATCTTTTGATGATCTTTGTGGAAACTCAGGATGTGGAAATCAGGAAAGGAAGTTGGAAGGATCCATTAAT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 ACTCATCTTTTGATGATCTTTGTGGAAACTCAGGATGTGGAAATCAGGAAAGGAAGTTGGAAGGATCCATTAAT 729
Query 484 GACATTAAAAGTGATGTGTGTATTTCTTCACTTGTATTGAAAGCAAATAATATTCATTCATCACCATCTTTCAC 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 GACATTAAAAGTGATGTGTGTATTTCTTCACTTGTATTGAAAGCAAATAATATTCATTCATCACCATCTTTCAC 803
Query 558 TCACCTCGATAAATCAAGTCCTCAGAAATTTCTGAGTAATCTTTCAAAGGAAGAAATAAACTTGCAAAGAAATA 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 TCACCTCGATAAATCAAGTCCTCAGAAATTTCTGAGTAATCTTTCAAAGGAAGAAATAAACTTGCAAAGAAATA 877
Query 632 TTGCAGGTAAAGTAGTCACCCCTCACCAAAAGCAGGCTGCAGGTATGTCTCAGGAGACGTTTGAAGAGAAGTAT 705
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 TTGCAGGTAAAGTAGTCACCCCTGACCAAAAGCAGGCTGCAGGTATGTCTCAGGAGACGTTTGAAGAGAAGTAT 951
Query 706 CGTTTGTCTCCTACCTTATCTTCAACAAAAGGCCACCTTTTGATACATTCAAGACCCAGGAGTTCCTCAGTAAA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 CGTTTGTCTCCTACCTTATCTTCAACAAAAGGCCACCTTTTGATACATTCAAGACCCAGGAGTTCCTCAGTAAA 1025
Query 780 GAGAAAAAGAGTATCACATGGCTCCCATTCACCTCCGAAGGAAAAATGCAAGAGAAAGAGGAGCACCAGGAGAT 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 GAGAAAAAGAGTATCACATGGCTCCCATTCACCTCCGAAGGAAAAATGCAAGAGAAAGAGGAGCACCAGGAGAT 1099
Query 854 CTATCATGCCGAGGCTGCAGCTGTGCAGGTCGGAAGGCAGGCTGCAGCACGTGGCGGGACCTGCCCTGGAGGCT 927
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1100 CTATCATGCCGAGGCTGCAGCTGTGCAGGTCGGAAGACAGGCTGCAGCACGTGGCGGGACCTGCCCTGGAGGCT 1173
Query 928 CTTAGCTGTGGGGAGTCTTCATATGATGACTATTTTTCACCTGATAATCTTAAGGAAAGGTATTCAGAGAATCT 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 CTTAGCTGTGGGGAGTCTTCATATGATGACTATTTTTCACCTGATAATCTTAAGGAAAGGTATTCAGAGAATCT 1247
Query 1002 TCCTCCTGAATCTCAGCTGCCATCAAGCCCTGCTCAGTTGAGCTGCAGAAGTCTTTCTAAGAAGGAGAGAACAA 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248 TCCTCCTGAATCTCAGCTGCCATCAAGCCCTGCTCAGTTGAGCTGCAGAAGTCTTTCTAAGAAGGAGAGAACAA 1321
Query 1076 GCATATTTGAAATGTCTGATTTTTCCTGCGTTGGCAAAAAAACCAGAACAGTTGACATTACCAATTTCACAGCA 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322 GCATATTTGAAATGTCTGATTTTTCCTGCGTTGGCAAAAAAACCAGAACAGTTGACATTACCAATTTCACAGCA 1395
Query 1150 AAAACCATCTCCAGTCCTCGGAAAACTGGAAATGGTGAAGGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCC 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 AAAACCATCTCCAGTCCTCGGAAAACTGGAAATGGTGAAGGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCC 1469
Query 1224 TGAAGAAGCCCTAAGGTGTTGTAGACAGGCTGGGAAAGAAGACGCATGCCCAGAGGGAAATGGCTTTTCTTACA 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470 TGAAGAAGCCCTAAGGTGTTGTAGACAGGCTGGGAAAGAAGACGCATGCCCAGAGGGAAATGGCTTTTCTTACA 1543
Query 1298 CCATTGAGGACCCTGCTCTTCCAAAAGGACATGATGATGATTTAACTCCTTTGGAAGGAAGCCTTGAAGAAATG 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1544 CCATTGAGGACCCTGCTCTTCCAAAAGGACATGATGATGATTTAACTCCTTTGGAAGGAAGCCTTGAAGAAATG 1617
Query 1372 AAAGAAGCGGTTGGTCTGAAAAGCACACAGAACAAAGGTACCACTTCCAAAATATCAAACTCCTCTGAAGGCGA 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 AAAGAAGCGGTTGGTCTGAAAAGCACACAGAACAAAGGTACCACTTCCAAAATATCAAACTCCTCTGAAGGCGA 1691
Query 1446 AGCCCAGAGTGAACATGAGCCATGTTTTATAGTTGACTGTAACATGGAGACGTCTACAGAAGAGAAGGAAAACT 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692 AGCCCAGAGTGAACATGAGCCATGTTTTATAGTTGACTGTAACATGGAGACGTCTACAGAAGAGAAGGAAAACT 1765
Query 1520 TACCCGGAGGATACAGTGGAAGTATG------------------------------------------------ 1545
||||||||||||||||||||||||||
Sbjct 1766 TACCCGGAGGATACAGTGGAAGTATGTGAATCTCCTTTTCCAAGTCACCTTCGCTAAATAAACATGTAACAGTG 1839
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1840 CATCCATATTTTAAATTTATCACAACTTTTTCATAACTTATTTCCCCATTTACTCCTCTTTTTACTTAAAGAAT 1913
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1914 GTGCATTTGATCATTCCAATGATAAACTCTTTAGGAATAGATGACTTGCTGTCTTGTGGAACTTCTAGACTTAT 1987
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1988 TGGTTAAGTCTGTTAGGAATCTATTTCTCCAAGACTTTTCCTTCTTATAGGTCAAAAGGATAAGTAGTCCATAG 2061
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2062 TATGAATAACTGAGGGGAGTGAAGTCTTTTTCCTTATTCCATTGGAGTCTTGGCGCTGCAGCGTGTGTAAAGAT 2135
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2136 GTATACGATAGAGAGTTTTTTAAAACCTAGGTTCTTAATAGTGAGGCTATTTAAAGAAAGAAATTAAGGTAGAT 2209
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2210 TAAGCCATCGATTGTATCATAGAGAAAGTGTGAAAAACTACTTTTAGAAATCTGTTGTCAATATTGATTTTTGA 2283
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2284 AGAAACTTTGGTCAGTGTTAACTATGAAGAAACATTTAAACATTTTTGATCATTTGTAACAAGCCTTGTTTAAC 2357
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2358 TTGTACTTATTTTGCTTGAAGCATCACTTGAAAAGGTTTACTCCTATTCATAATTTAATTGTAATTATAATAAA 2431
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2432 CCATATCATTTTATTAAAAGTCAAAACAATAAAAAATTTTGCACTTCACAGTTATAAGCACAAATAGGTTCCAG 2505
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2506 CAACCAAAATTGAAGAAATCTTGAACTTTGACCGTCTTTACCTAAAGATTAGGTTAAAATTTGAGTGAGAACGC 2579
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2580 ATTCTCTCTGCATGATTTCTCTGCTCTACAAATGTTTTAACTGCCTCTTTGAAGGTGGAGAAGTCATGGTAGCG 2653
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2654 TTTGAAATCATCACAGACATGTTACATACCTTTTCCTTGAGTATACGCTCCCCAAAATTGTTTCACAAAAAGAA 2727
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2728 TGAAAATAATTTTATGTTTTTGGCCTGCTATTTATATCTTGGCTTTCTGAACATATATTAAATTTGACAAGAAA 2801
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2802 CTGTATTTTATGTTCCATTAGCCTTAGTATGTGTTTTCAAAATATTTATTTTAAAATGTTGACTCAAAAGTTAA 2875
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2876 TATAAAACAATAGATGTGTAAAATTCTTTGGTAGTTAAGAATATCCTGTTCTGAGGTTTACATTCTCCATCTTT 2949
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 2950 CCAGTTTTCACCTTGTGTATTTTTTAAGCTTTTGAATAATAATGACATGGAAATGTAAATTAAGTAGGAAAAAG 3023
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3024 CTGGTAGCAAACAGTGTGGCATGGCCTAAAATCCCCGTGTTGCTGGGAGTGTGCTAGTCCTCGGAAGCAGGTGT 3097
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3098 GTTATGTTCTAGAACACTGCCCCCCTGCGTCGACAGCCTCCGGGGTTGGGGGTAAGTAGAAGGGGGTGAGGGGC 3171
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3172 CAGCACTAGTTGACTCAAGGCACCCTGGTGGGGACGGAGAGGTTTTTTCGCTCAGTGGTGCAGGCCATCAGGCA 3245
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3246 GGGGTGTCCAGGCAGGGCCCGGGTGCAAGAAAACATTCTGTGTGCGCTAGTGCGAGAGGATCTTCTACAGTCAC 3319
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3320 CTGCCTTCATGCCATTACAGACAGACGGGAAGTCACTGGGTTCTAGGACATAAAAAGACCTACATGTTGGCTAG 3393
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3394 CCTAAATCGAACCCTTTTATAGTAATAAAGATTCATCAATGTTTTAAACTGTCCACTGTCAGCCCCCTGGGACT 3467
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3468 CAGGTGAACCAACTCTCTTTGGGAATCTATCTTAGAAGATGAAACCATAAAGCCTTCAGTTTCAATGTCAGGGA 3541
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 3542 TGCACACTCTATATCTGGTGAAATTATGGAGGGGTGAAAACTTCTGTACAGCAAACTGTACCTCCAAATCTTTA 3615
Query 1546 ---------------------------------------------------- 1545
Sbjct 3616 ATGTCGAAATAAAGGGCTTTTTGCCATTTCTGTTTTCAGTTCAAAAAAAAAA 3667
