Nucleotide Global Alignment
Description
- Query:
- TRCN0000468604
- Subject:
- XM_006533108.3
- Aligned Length:
- 2485
- Identities:
- 1263
- Gaps:
- 1052
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCTCAGCTGACAAGAATGGCAGCAACCTCCCATCTGTGTCTGGTAGCCGCCTGCAGAGCCGGAAGCCACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAACCTCTCCATCACCATCCCGCCACCAGAGAGCCAGGCCCCCGGCGAGCAGGATAGCATGCTTCCTGAGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAAGAACCCAGCCTACCTGAAGAGTGTCAGCCTACAGGAGCCCCGGGGACGATGGCAGGAGGGCGCAGAGAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCCCCGGCTTCCGCCGCCAGGCCTCCCTGTCCCAGAGCATCCGCAAGAGCACAGCCCAGTGGTTTGGGGTCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGCGACTGGGAGGGCAAGCGACAAAACTGGCATCGTCGCAGCCTGCACCACTGCAGCGTGCACTATGGCCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAAGGCCTCGTGCCAGAGAGAACTGGAGCTGCCCAGCCAGGAGGTGCCATCCTTCCAGGGCACTGAGTCTCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACCGTGCAAGATGCCCAAGATTGTGGATCCACTGGCTCGGGGTAGGGCCTTCCGCCATCCAGATGAGGTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGGCCTCACGCTGCCCACCCACCTCTGACTCCAGGGGTCCTGTCTCTCACATCCTTCACCAGTGTCCGCTCTG 592
Query 1 -----------------------------ATGTCTGTGGCCCACATGAGCTTGCAAGCTGCCGCTGCCCTCCTC 45
||.|||||.|||||.||||||||.||.||.|||||.|||||||||
Sbjct 593 GCTACTCCCATCTGCCCCGCCGCAAGAGGATATCTGTTGCCCATATGAGCTTTCAGGCAGCCGCCGCCCTCCTC 666
Query 46 AAGGGGCGCTCGGTGCTGGATGCCACCGGACAGCGGTGCCGGGTGGTCAAGCGCAGCTTTGCCTTCCCGAGCTT 119
||||||||.||.|||||.|||||.||.||.||||||||||||...|||||.||||||||.||.|.|||.|||||
Sbjct 667 AAGGGGCGTTCCGTGCTAGATGCGACTGGGCAGCGGTGCCGGCATGTCAAACGCAGCTTCGCTTACCCCAGCTT 740
Query 120 CCTGGAGGAGGATGTGGTCGATGGGGCAGACACGTTTGACTCCTCCTTTTTTAGTAAGGAAGAAATGAGCTCCA 193
||||||||||||||..||||||||.||.|||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTGGAGGAGGATGCTGTCGATGGAGCTGACACCTTCGACTCCTCCTTTTTTAGTAAGGAAGAAATGAGCTCCA 814
Query 194 TGCCTGATGATGTCTTTGAGTCCCCCCCACTCTCTGCCAGCTACTTCCGAGGGATCCCACACTCAGCCTCCCCT 267
|||||||.||||||||||||||||||||||||||||||||||||||||||||..||||||||||.||||||||.
Sbjct 815 TGCCTGACGATGTCTTTGAGTCCCCCCCACTCTCTGCCAGCTACTTCCGAGGTGTCCCACACTCTGCCTCCCCG 888
Query 268 GTCTCCCCCGATGGGGTGCAAATCCCTCTGAAGGAGTA------TGGCCGAGCCCCAGTCCCCGGGCCCCGGCG 335
||||||||.|||||.|||||.|||||.||.||.||.|| |||||||||||..|..||||||.|||.|||
Sbjct 889 GTCTCCCCGGATGGAGTGCACATCCCGCTAAAAGAATACAGCGGTGGCCGAGCCCTGGGTCCCGGGACCCAGCG 962
Query 336 CGGCAAGCGCATCGCCTCCAAGGTGAAGCACTTTGCCTTTGATCGGAAGAAGCGGCACTACGGCCTCGGCGTGG 409
.|||||.|||||.||||||||.||.|||||||||||.|||||.|||||||||.|||||||||||||.|||||.|
Sbjct 963 TGGCAAACGCATTGCCTCCAAAGTAAAGCACTTTGCATTTGACCGGAAGAAGAGGCACTACGGCCTGGGCGTCG 1036
Query 410 TGGGCAACTGGCTGAACCGCAGCTACCGCCGCAGCATCAGCAGCACTGTGCAGCGGCAGCTGGAGAGCTTCGAC 483
||||.||||||||.|||||.|||||.||.|||||||||||||||||.||||||||||||||||||||||||||.
Sbjct 1037 TGGGTAACTGGCTCAACCGAAGCTATCGACGCAGCATCAGCAGCACCGTGCAGCGGCAGCTGGAGAGCTTCGAT 1110
Query 484 AGCCACCGGCCCTACTTCACCTACTGGCTGACCTTCGTCCATGTCATCATCACGCTGCTGGTGATTTGCACGTA 557
||||||||||||||||||||||||||||||||.|||||.||..||||||||||..||||||||||.|||||.||
Sbjct 1111 AGCCACCGGCCCTACTTCACCTACTGGCTGACGTTCGTTCACATCATCATCACCTTGCTGGTGATCTGCACCTA 1184
Query 558 TGGCATCGCACCCGTGGGCTTTGCCCAGCACGTCACCACCCAGCTGGTGCTGCGGAACAAAGGTGTGTACGAGA 631
||||||||||||.||||||||||||||||||||.||||||||||||||||||..|||||.|||.|||||.||||
Sbjct 1185 TGGCATCGCACCTGTGGGCTTTGCCCAGCACGTTACCACCCAGCTGGTGCTGAAGAACAGAGGCGTGTATGAGA 1258
Query 632 GCGTGAAGTACATCCAGCAGGAGAACTTCTGGGTTGGCCCCAGCTCGATTGACCTGATCCACCTGGGGGCCAAG 705
||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||.||||||||.||.|||
Sbjct 1259 GCGTGAAGTACATCCAGCAGGAGAACTTCTGGATTGGCCCCAGCTCGATTGACCTCATTCACCTGGGAGCAAAG 1332
Query 706 TTCTCACCCTGCATCCGGAAGGACGGGCAGATCGAGCAGCTGGTGCTGCGCGAGCGAGACCTGGAGCGGGACTC 779
|||||.||||||||||||||||||..|||.||.|||||||||||.|.|.|.|||||.|||.|.|||||...|||
Sbjct 1333 TTCTCGCCCTGCATCCGGAAGGACCAGCAAATTGAGCAGCTGGTACGGAGGGAGCGCGACATTGAGCGCACCTC 1406
Query 780 AGGCTGCTGTGTCCAGAATGACCACTCCGGATGCATCCAGACCCAGCGGAAGGACTGCTCGGAGACTTTGGCCA 853
.||||||||||||||||||||||.|||.||.|||||||||||||.|..|||||||||||||||||||||.||||
Sbjct 1407 TGGCTGCTGTGTCCAGAATGACCGCTCGGGCTGCATCCAGACCCTGAAGAAGGACTGCTCGGAGACTTTAGCCA 1480
Query 854 CTTTTGTCAAGTGGCAGGATGACACTGGGCCCCCCATGGACAAGTCTGATCTGGGCCAGAAGCGGACTTCGGGG 927
|.||.||.|||||||||.||||.|||||||||.| .|||||||||||.|||.|||||||||.|.|.||||.|
Sbjct 1481 CGTTCGTAAAGTGGCAGAATGATACTGGGCCCTC---AGACAAGTCTGACCTGAGCCAGAAGCAGCCATCGGCG 1551
Query 928 GCTGTCTGCCACCAGGACCCCAGGACCTGCGAGGAGCCAGCCTCCAGCGGTGCCCACATCTGGCCCGATGACAT 1001
|.|||.||||||||.||||||||||||||.||.|||||.||||||||.||.||||||||||||||.||||||||
Sbjct 1552 GTTGTGTGCCACCAAGACCCCAGGACCTGTGAAGAGCCTGCCTCCAGTGGGGCCCACATCTGGCCTGATGACAT 1625
Query 1002 CACTAAGTGGCCGATCTGCACAGAGCAGGC-CAGGAGCAACCACACAGGCTTCCTGCACATGGACTGCGAGATC 1074
.||.|||||||||||||||||||||||||| || ||||||||||||.|||||..|||||||.|||||..|||||
Sbjct 1626 TACCAAGTGGCCGATCTGCACAGAGCAGGCTCA-GAGCAACCACACGGGCTTGTTGCACATAGACTGTAAGATC 1698
Query 1075 AAGGGCCGCCCCTGCTGCATCGGCACCAAGGGCAGCTGTGAGATCACCACCCGGGAATACTGTGAGTTCATGCA 1148
||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||
Sbjct 1699 AAAGGCCGCCCCTGCTGCATCGGCACCAAGGGCAGCTGCGAGATCACCACTCGGGAGTACTGTGAGTTCATGCA 1772
Query 1149 CGGCTATTTCCATGAGGAAGCAACACTCTGCTCCCAGGTGCACTGCTTGGACAAGGTGTGTGGGCTGCTGCCCT 1222
.||||||||||||||.||.||.||.||.||.||||||||||||||.||.|||||||||||||||||.|||||.|
Sbjct 1773 TGGCTATTTCCATGAAGACGCGACGCTGTGTTCCCAGGTGCACTGTTTAGACAAGGTGTGTGGGCTCCTGCCTT 1846
Query 1223 TCCTCAACCCTGAGGTCCCAGATCAGTTCTACAGGCTCTGGCTGTCTCTCTTCCTACATGCTGGCGTGGTGCAC 1296
|||||||||||||||||||.||.|||||||||.||.|||||||||||.|.|||||.|||||||
Sbjct 1847 TCCTCAACCCTGAGGTCCCTGACCAGTTCTACCGGATCTGGCTGTCTTTATTCCTGCATGCTG----------- 1909
Query 1297 TGCCTCGTGTCTGTGGTCTTTCAAATGACCATCCTGAGGGACCTGGAGAAGCTGGCCGGCTGGCACCGTATCGC 1370
Sbjct 1910 -------------------------------------------------------------------------- 1909
Query 1371 CATCATCTTCATCCTCAGTGGCATCACAGGCAACCTCGCCAGTGCCATCTTTCTCCCATACCGGGCAGAGGTGG 1444
|||||
Sbjct 1910 ---------------------------------------------------------------------GGTGG 1914
Query 1445 GCCCGGCCGGCTCACAGTTCGGCCTCCTCGCCTGCCTCTTCGTGGAGCTCTTCCAGAGCTGGCCGCTGCTGGAG 1518
||||.|||||.||.|||||||||||||||||||||||||||||||||||.|||||||||||||.||||.|||||
Sbjct 1915 GCCCAGCCGGGTCGCAGTTCGGCCTCCTCGCCTGCCTCTTCGTGGAGCTGTTCCAGAGCTGGCAGCTGTTGGAG 1988
Query 1519 AGGCCCTGGAAGGCCTTCCTCAACCTCTCGGCCATCGTGCTCTTCCTGTTCATCTGTGGCCTCCTGCCCTGGAT 1592
.||||.||||||||||||.|||||||.||||||||.|||||.|||||.|||||||||||||||||||||||||
Sbjct 1989 CGGCCGTGGAAGGCCTTCTTCAACCTGTCGGCCATTGTGCTTTTCCTCTTCATCTGTGGCCTCCTGCCCTGGA- 2061
Query 1593 CGACAACATCGCCCACATCTTCGGCTTCCTCAGTGGCCTGCTGCTGGCCTTCGCCTTCCTGCCCTACATCACCT 1666
Sbjct 2062 -------------------------------------------------------------------------- 2061
Query 1667 TCGGCACCAGCGACAAGTACCGCAAGCGGGCACTCATCCTGGTGTCACTGCTGGCCTTTGCCGGCCTCTTCGCC 1740
Sbjct 2062 -------------------------------------------------------------------------- 2061
Query 1741 GCCCTCGTGCTGTGGCTGTACATCTACCCCATTAACTGGCCCTGGATCGAGCACCTCACCTGCTTCCCCTTCAC 1814
Sbjct 2062 -------------------------------------------------------------------------- 2061
Query 1815 CAGCCGCTTCTGCGAGAAGTATGAGCTGGACCAGGTGCTGCAC 1857
Sbjct 2062 ------------------------------------------- 2061
