Nucleotide Global Alignment

Description

Query:
TRCN0000468604
Subject:
XM_017314494.1
Aligned Length:
1864
Identities:
1586
Gaps:
80

Alignment

Query    1  ATGTCTGTGGCCCACATGAGCTTGCAAGCTGCCGCTGCCCTCCTCAAGGGGCGCTCGGTGCTGGATGCCACCGG  74
                                                                            ||||.||.||
Sbjct    1  ----------------------------------------------------------------ATGCGACTGG  10

Query   75  ACAGCGGTGCCGGGTGGTCAAGCGCAGCTTTGCCTTCCCGAGCTTCCTGGAGGAGGATGTGGTCGATGGGGCAG  148
            .||||||||||||...|||||.||||||||.||.|.|||.|||||||||||||||||||..||||||||.||.|
Sbjct   11  GCAGCGGTGCCGGCATGTCAAACGCAGCTTCGCTTACCCCAGCTTCCTGGAGGAGGATGCTGTCGATGGAGCTG  84

Query  149  ACACGTTTGACTCCTCCTTTTTTAGTAAGGAAGAAATGAGCTCCATGCCTGATGATGTCTTTGAGTCCCCCCCA  222
            ||||.||.||||||||||||||||     |||||||||||||||||||||||.|||||||||||||||||||||
Sbjct   85  ACACCTTCGACTCCTCCTTTTTTA-----GAAGAAATGAGCTCCATGCCTGACGATGTCTTTGAGTCCCCCCCA  153

Query  223  CTCTCTGCCAGCTACTTCCGAGGGATCCCACACTCAGCCTCCCCTGTCTCCCCCGATGGGGTGCAAATCCCTCT  296
            |||||||||||||||||||||||..||||||||||.||||||||.||||||||.|||||.|||||.|||||.||
Sbjct  154  CTCTCTGCCAGCTACTTCCGAGGTGTCCCACACTCTGCCTCCCCGGTCTCCCCGGATGGAGTGCACATCCCGCT  227

Query  297  GAAGGAGTA------TGGCCGAGCCCCAGTCCCCGGGCCCCGGCGCGGCAAGCGCATCGCCTCCAAGGTGAAGC  364
            .||.||.||      |||||||||||..|..||||||.|||.|||.|||||.|||||.||||||||.||.||||
Sbjct  228  AAAAGAATACAGCGGTGGCCGAGCCCTGGGTCCCGGGACCCAGCGTGGCAAACGCATTGCCTCCAAAGTAAAGC  301

Query  365  ACTTTGCCTTTGATCGGAAGAAGCGGCACTACGGCCTCGGCGTGGTGGGCAACTGGCTGAACCGCAGCTACCGC  438
            |||||||.|||||.|||||||||.|||||||||||||.|||||.|||||.||||||||.|||||.|||||.||.
Sbjct  302  ACTTTGCATTTGACCGGAAGAAGAGGCACTACGGCCTGGGCGTCGTGGGTAACTGGCTCAACCGAAGCTATCGA  375

Query  439  CGCAGCATCAGCAGCACTGTGCAGCGGCAGCTGGAGAGCTTCGACAGCCACCGGCCCTACTTCACCTACTGGCT  512
            |||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  376  CGCAGCATCAGCAGCACCGTGCAGCGGCAGCTGGAGAGCTTCGATAGCCACCGGCCCTACTTCACCTACTGGCT  449

Query  513  GACCTTCGTCCATGTCATCATCACGCTGCTGGTGATTTGCACGTATGGCATCGCACCCGTGGGCTTTGCCCAGC  586
            |||.|||||.||..||||||||||..||||||||||.|||||.||||||||||||||.||||||||||||||||
Sbjct  450  GACGTTCGTTCACATCATCATCACCTTGCTGGTGATCTGCACCTATGGCATCGCACCTGTGGGCTTTGCCCAGC  523

Query  587  ACGTCACCACCCAGCTGGTGCTGCGGAACAAAGGTGTGTACGAGAGCGTGAAGTACATCCAGCAGGAGAACTTC  660
            ||||.||||||||||||||||||..|||||.|||.|||||.|||||||||||||||||||||||||||||||||
Sbjct  524  ACGTTACCACCCAGCTGGTGCTGAAGAACAGAGGCGTGTATGAGAGCGTGAAGTACATCCAGCAGGAGAACTTC  597

Query  661  TGGGTTGGCCCCAGCTCGATTGACCTGATCCACCTGGGGGCCAAGTTCTCACCCTGCATCCGGAAGGACGGGCA  734
            |||.||||||||||||||||||||||.||.||||||||.||.||||||||.||||||||||||||||||..|||
Sbjct  598  TGGATTGGCCCCAGCTCGATTGACCTCATTCACCTGGGAGCAAAGTTCTCGCCCTGCATCCGGAAGGACCAGCA  671

Query  735  GATCGAGCAGCTGGTGCTGCGCGAGCGAGACCTGGAGCGGGACTCAGGCTGCTGTGTCCAGAATGACCACTCCG  808
            .||.|||||||||||.|.|.|.|||||.|||.|.|||||...|||.||||||||||||||||||||||.|||.|
Sbjct  672  AATTGAGCAGCTGGTACGGAGGGAGCGCGACATTGAGCGCACCTCTGGCTGCTGTGTCCAGAATGACCGCTCGG  745

Query  809  GATGCATCCAGACCCAGCGGAAGGACTGCTCGGAGACTTTGGCCACTTTTGTCAAGTGGCAGGATGACACTGGG  882
            |.|||||||||||||.|..|||||||||||||||||||||.|||||.||.||.|||||||||.||||.||||||
Sbjct  746  GCTGCATCCAGACCCTGAAGAAGGACTGCTCGGAGACTTTAGCCACGTTCGTAAAGTGGCAGAATGATACTGGG  819

Query  883  CCCCCCATGGACAAGTCTGATCTGGGCCAGAAGCGGACTTCGGGGGCTGTCTGCCACCAGGACCCCAGGACCTG  956
            |||.|   .|||||||||||.|||.|||||||||.|.|.||||.||.|||.||||||||.||||||||||||||
Sbjct  820  CCCTC---AGACAAGTCTGACCTGAGCCAGAAGCAGCCATCGGCGGTTGTGTGCCACCAAGACCCCAGGACCTG  890

Query  957  CGAGGAGCCAGCCTCCAGCGGTGCCCACATCTGGCCCGATGACATCACTAAGTGGCCGATCTGCACAGAGCAGG  1030
            .||.|||||.||||||||.||.||||||||||||||.||||||||.||.|||||||||||||||||||||||||
Sbjct  891  TGAAGAGCCTGCCTCCAGTGGGGCCCACATCTGGCCTGATGACATTACCAAGTGGCCGATCTGCACAGAGCAGG  964

Query 1031  C-CAGGAGCAACCACACAGGCTTCCTGCACATGGACTGCGAGATCAAGGGCCGCCCCTGCTGCATCGGCACCAA  1103
            | || ||||||||||||.|||||..|||||||.|||||..|||||||.||||||||||||||||||||||||||
Sbjct  965  CTCA-GAGCAACCACACGGGCTTGTTGCACATAGACTGTAAGATCAAAGGCCGCCCCTGCTGCATCGGCACCAA  1037

Query 1104  GGGCAGCTGTGAGATCACCACCCGGGAATACTGTGAGTTCATGCACGGCTATTTCCATGAGGAAGCAACACTCT  1177
            |||||||||.|||||||||||.|||||.|||||||||||||||||.||||||||||||||.||.||.||.||.|
Sbjct 1038  GGGCAGCTGCGAGATCACCACTCGGGAGTACTGTGAGTTCATGCATGGCTATTTCCATGAAGACGCGACGCTGT  1111

Query 1178  GCTCCCAGGTGCACTGCTTGGACAAGGTGTGTGGGCTGCTGCCCTTCCTCAACCCTGAGGTCCCAGATCAGTTC  1251
            |.||||||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||.||.||||||
Sbjct 1112  GTTCCCAGGTGCACTGTTTAGACAAGGTGTGTGGGCTCCTGCCTTTCCTCAACCCTGAGGTCCCTGACCAGTTC  1185

Query 1252  TACAGGCTCTGGCTGTCTCTCTTCCTACATGCTGGCGTGGTGCACTGCCTCGTGTCTGTGGTCTTTCAAATGAC  1325
            |||.||.|||||||||||.|.|||||.|||||||||.|.|||||||||||.||||||||||||||.||||||||
Sbjct 1186  TACCGGATCTGGCTGTCTTTATTCCTGCATGCTGGCATAGTGCACTGCCTTGTGTCTGTGGTCTTCCAAATGAC  1259

Query 1326  CATCCTGAGGGACCTGGAGAAGCTGGCCGGCTGGCACCGTATCGCCATCATCTTCATCCTCAGTGGCATCACAG  1399
            |||||||||||||||.|||||||||||||||||||||||.|||.||||||||||||||||.||||||||.||||
Sbjct 1260  CATCCTGAGGGACCTAGAGAAGCTGGCCGGCTGGCACCGCATCTCCATCATCTTCATCCTTAGTGGCATTACAG  1333

Query 1400  GCAACCTCGCCAGTGCCATCTTTCTCCCATACCGGGCAGAGGTGGGCCCGGCCGGCTCACAGTTCGGCCTCCTC  1473
            |||||||.|||||.||||||||.|||||.||||||||||||||||||||.|||||.||.|||||||||||||||
Sbjct 1334  GCAACCTGGCCAGCGCCATCTTCCTCCCCTACCGGGCAGAGGTGGGCCCAGCCGGGTCGCAGTTCGGCCTCCTC  1407

Query 1474  GCCTGCCTCTTCGTGGAGCTCTTCCAGAGCTGGCCGCTGCTGGAGAGGCCCTGGAAGGCCTTCCTCAACCTCTC  1547
            ||||||||||||||||||||.|||||||||||||.||||.|||||.||||.||||||||||||.|||||||.||
Sbjct 1408  GCCTGCCTCTTCGTGGAGCTGTTCCAGAGCTGGCAGCTGTTGGAGCGGCCGTGGAAGGCCTTCTTCAACCTGTC  1481

Query 1548  GGCCATCGTGCTCTTCCTGTTCATCTGTGGCCTCCTGCCCTGGATCGACAACATCGCCCACATCTTCGGCTTCC  1621
            ||||||.|||||.|||||.||||||||||||||||||||||||||.|||||||||||||||||||||||.||||
Sbjct 1482  GGCCATTGTGCTTTTCCTCTTCATCTGTGGCCTCCTGCCCTGGATAGACAACATCGCCCACATCTTCGGGTTCC  1555

Query 1622  TCAGTGGCCTGCTGCTGGCCTTCGCCTTCCTGCCCTACATCACCTTCGGCACCAGCGACAAGTACCGCAAGCGG  1695
            ||||.|||.||||.||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.
Sbjct 1556  TCAGCGGCATGCTTCTGGCCTTCGCCTTCCTGCCTTACATTACCTTCGGCACCAGCGACAAGTACCGCAAGCGA  1629

Query 1696  GCACTCATCCTGGTGTCACTGCTGGCCTTTGCCGGCCTCTTCGCCGCCCTCGTGCTGTGGCTGTACATCTACCC  1769
            ||.||||||||.|||||.|||||||.||||||.||.|||||.||..||||.|||||||||||||||||||||||
Sbjct 1630  GCCCTCATCCTCGTGTCGCTGCTGGTCTTTGCTGGGCTCTTTGCTTCCCTGGTGCTGTGGCTGTACATCTACCC  1703

Query 1770  CATTAACTGGCCCTGGATCGAGCACCTCACCTGCTTCCCCTTCACCAGCCGCTTCTGCGAGAAGTATGAGCTGG  1843
            |||.||||||||||||||||||.|||||||||||||.||||||||||||||||||||.||||||||.|||||.|
Sbjct 1704  CATCAACTGGCCCTGGATCGAGTACCTCACCTGCTTTCCCTTCACCAGCCGCTTCTGTGAGAAGTACGAGCTAG  1777

Query 1844  ACCAGGTGCTGCAC  1857
            ||||||||||.|||
Sbjct 1778  ACCAGGTGCTACAC  1791

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