Nucleotide Global Alignment
Description
- Query:
- TRCN0000468625
- Subject:
- XM_011527814.2
- Aligned Length:
- 3428
- Identities:
- 988
- Gaps:
- 2398
Alignment
Query 1 ATGGGGTCTGAGGACCACGGCGCCCAGAACCCCAGCTGTAAAATCATGACGTTTCGCCCAACCATGGAAGAATT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TAAAGACTTCAACAAATACGTGGCCTACATAGAGTCGCAGGGAGCCCACCGGGCGGGCCTGGCCAAGATCATCC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCCCGAAGGAGTGGAAGCCGCGGCAGACGTATGATGACATCGACGACGTGGTGATCCCGGCGCCCATCCAGCAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GTGGTGACGGGCCAGTCGGGCCTCTTCACGCAGTACAATATCCAGAAGAAGGCCATGACAGTGGGCGAGTACCG 296
||||||||||||||||||||
Sbjct 1 ------------------------------------------------------ATGACAGTGGGCGAGTACCG 20
Query 297 CCGCCTGGCCAACAGCGAGAAGTACTGTACCCCGCGGCACCAGGACTTTGACGACCTTGAACGCAAATACTGGA 370
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 21 CCGCCTGGCCAACAGCGAGAAGTACTGTACCCCGCGGCACCAGGACTTTGATGACCTTGAACGCAAATACTGGA 94
Query 371 AGAACCTCACCTTTGTCTCCCCGATCTACGGGGCTGACATCAGCGGCTCTTTGTATGATGACGACGTGGCCCAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 AGAACCTCACCTTTGTCTCCCCGATCTACGGGGCTGACATCAGCGGCTCTTTGTATGATGACGACGTGGCCCAG 168
Query 445 TGGAACATCGGGAGCCTCCGGACCATCCTGGACATGGTGGAGCGCGAGTGCGGCACCATCATCGAGGGCGTGAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 TGGAACATCGGGAGCCTCCGGACCATCCTGGACATGGTGGAGCGCGAGTGCGGCACCATCATCGAGGGCGTGAA 242
Query 519 CACGCCCTACCTGTACTTCGGCATGTGGAAGACCACCTTCGCCTGGCACACCGAGGACATGGACCTGTACAGCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 CACGCCCTACCTGTACTTCGGCATGTGGAAGACCACCTTCGCCTGGCACACCGAGGACATGGACCTGTACAGCA 316
Query 593 TCAACTACCTGCACTTTGGGGAGCCTAAGTCCTGGTACGCCATCCCACCAGAGCACGGCAAGCGCCTGGAGCGG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 317 TCAACTACCTGCACTTTGGGGAGCCTAAGTCCTGGTACGCCATCCCACCAGAGCACGGCAAGCGCCTGGAGCGG 390
Query 667 CTGGCCATCGGCTTCTTCCCCGGGAGCTCGCAGGGCTGCGACGCCTTCCTGCGGCATAAGATGACCCTCATCTC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 391 CTGGCCATCGGCTTCTTCCCCGGGAGCTCGCAGGGCTGCGACGCCTTCCTGCGGCATAAGATGACCCTCATCTC 464
Query 741 GCCCATCATCCTGAAGAAGTACGGGATCCCCTTCAGCCGGATCACGCAGGAGGCCGGGGAATTCATGATCACAT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 GCCCATCATCCTGAAGAAGTACGGGATCCCCTTCAGCCGGATCACGCAGGAGGCCGGGGAATTCATGATCACAT 538
Query 815 TTCCCTACGGCTACCACGCCGGCTTCAATCACGGGTTCAACTGCGCAGAATCTACCAACTTCGCCACCCTGCGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TTCCCTACGGCTACCACGCCGGCTTCAATCACGGGTTCAACTGCGCAGAATCTACCAACTTCGCCACCCTGCGG 612
Query 889 TGGATTGACTACGGCAAAGTGGCCACTCAGTGCACGTGCCGGAAGGACATGGTCAAGATCTCCATGGACGTGTT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 TGGATTGACTACGGCAAAGTGGCCACTCAGTGCACGTGCCGGAAGGACATGGTCAAGATCTCCATGGACGTGTT 686
Query 963 CGTGCGCATCCTGCAGCCCGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 687 CGTGCGCATCCTGCAGCCCGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGC 760
Query 1037 GGCCCACGGCGCTCACCAGCCCCGAGCTGAGCTCCTGGAGTGCGTCCCGGGCCTCGCTGAAGGCCAAGCTCCTC 1110
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 761 GGCCCACGGCGCTCACCAGCCCCGAGCTGAGCTCCTGGAGTGCATCCCGGGCCTCGCTGAAGGCCAAGCTCCTC 834
Query 1111 CGCAGAACCCCTCC--------CTGCGTATCGCCGCACAGACCCTCCCAGCCAGGTATCTGGTGTCCGCCT--G 1174
|||||| | ||| |.||| ...|||.|| ||||.|...|.|| |
Sbjct 835 CGCAGA-------CAAATTAGTCTG-----------AAAGA---AAACAGACA-----CTGGAGAAAGACTGAG 882
Query 1175 GAGGAGAGGCCAAAGCA--TCT---------------GCAGCC-------TCTTGGCT----TCT--------- 1211
||||||||| |||.|| ||| ||||.| .|..|||| |||
Sbjct 883 GAGGAGAGG--AAACCAAGTCTAGAAAGGAAGAAAGAGCAGACCAAAAGGCCGGGGCTGTCGTCTCACCGGAAA 954
Query 1212 ------------------------------GACCACAA------------------------------------ 1219
||||.|||
Sbjct 955 CGGAGCCAGCCCAAGAAGCCGAAGCCCGAAGACCCCAAGTTCCCTGGGGAGGGTACGGCTGGGGCAGCGCTCCT 1028
Query 1220 ----GAGGCCATGGGGACA---------CGGAGGCAGGTCCCGG---------CCTAGGAGGAG---------- 1261
||||| |||||.|| .||||||.|| .|||| ||.||||||||
Sbjct 1029 AGAGGAGGC--TGGGGGCAGCGTGAAGGAGGAGGCTGG-GCCGGAGGTTGACCCCGAGGAGGAGGAGGAGGAGC 1099
Query 1262 ---ATCCACTTC------------ATGCCCAGAGTG-----------------------------------AAG 1285
|.|||||.| |.|||.||.|.| |||
Sbjct 1100 CGCAGCCACTGCCACACGGCCGGGAGGCCGAGGGCGCAGAAGAGGACGGGAGGGGCAAGCTGCGGCCAACCAAG 1173
Query 1286 GCCA--------------------------GGCCTCCTGTGTCTCGACGTCT--CGACTCCGCATGGCAACTCA 1331
|||| |||||.| ||.|.|.||..|| ||.|.||||.|| ||||
Sbjct 1174 GCCAAGAGCGAGCGGAAGAAGAAGAGCTTCGGCCTGC--TGCCCCCACAGCTGCCGCCCCCGCCTG----CTCA 1241
Query 1332 AGACCCTTGCAGA------------------------------------------------------------- 1344
...|||.| ||||
Sbjct 1242 CTTCCCCT-CAGAGGAGGCGCTGTGGCTGCCATCCCCACTGGAGCCCCCGGTGCTGGGCCCAGGCCCTGCAGCC 1314
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1315 ATGGAGGAGAGCCCCCTGCCGGCACCCCTTAATGTCGTGCCCCCTGAGGTGCCCAGTGAGGAGCTAGAGGCCAA 1388
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1389 GCCTCGGCCCATCATCCCCATGCTGTACGTGGTGCCGCGGCCGGGCAAGGCAGCCTTCAACCAGGAGCACGTGT 1462
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1463 CCTGCCAGCAGGCCTTTGAGCACTTTGCCCAGAAGGGTCCGACCTGGAAGGAACCAGTTTCCCCCATGGAGCTG 1536
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1537 ACGGGGCCAGAGGACGGTGCAGCCAGCAGTGGGGCAGGTCGCATGGAGACCAAAGCCCGGGCCGGAGAGGGGCA 1610
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1611 GGCACCGTCCACATTTTCCAAATTGAAGATGGAGATCAAGAAGAGCCGGCGCCATCCCCTGGGCCGGCCGCCCA 1684
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1685 CCCGGTCCCCACTGTCGGTGGTGAAGCAGGAGGCCTCAAGTGACGAGGAGGCATCCCCTTTCTCCGGGGAGGAA 1758
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1759 GATGTGAGTGACCCGGACGCCTTGAGGCCGCTGCTGTCTCTGCAGTGGAAGAACAGGGCGGCCAGCTTCCAGGC 1832
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1833 CGAGAGGAAGTTCAACGCAGCGGCTGCGCGCACGGAGCCCTACTGCGCCATCTGCACGCTCTTCTACCCCTACT 1906
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1907 GCCAGGCCCTACAGACTGAGAAGGAGGCACCCATAGCCTCCCTCGGAGAGGGCTGCCCGGCCACATTACCCTCC 1980
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 1981 AAAAGCCGTCAGAAGACCCGACCGCTCATCCCTGAGATGTGCTTCACCTCTGGCGGTGAGAACACGGAGCCGCT 2054
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2055 GCCTGCCAACTCCTACATCGGCGACGACGGGACCAGCCCCCTGATCGCCTGCGGCAAGTGCTGCCTGCAGGTCC 2128
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2129 ATGCCAGTTGCTATGGCATCCGTCCCGAGCTGGTCAATGAAGGCTGGACGTGTTCCCGGTGCGCGGCCCACGCC 2202
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2203 TGGACTGCGGAGTGCTGCCTGTGCAACCTGCGAGGAGGTGCGCTGCAGATGACCACCGATAGGAGGTGGATCCA 2276
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2277 CGTGATCTGTGCCATCGCAGTCCCCGAGGCGCGCTTCCTGAACGTGATTGAGCGCCACCCTGTGGACATCAGCG 2350
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2351 CCATCCCCGAGCAGCGGTGGAAGCTGAAATGCGTGTACTGCCGGAAGCGGATGAAGAAGGTGTCAGGTGCCTGT 2424
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2425 ATCCAGTGCTCCTACGAGCACTGCTCCACGTCCTTCCACGTGACCTGCGCCCACGCCGCAGGCGTGCTCATGGA 2498
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2499 GCCGGACGACTGGCCCTATGTGGTCTCCATCACCTGCCTCAAGCACAAGTCGGGGGGTCACGCTGTCCAACTCC 2572
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2573 TGAGGGCCGTGTCCCTAGGCCAGGTGGTCATCACCAAGAACCGCAACGGGCTGTACTACCGCTGTCGCGTCATC 2646
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2647 GGTGCCGCCTCGCAGACCTGCTACGAAGTGAACTTCGACGATGGCTCCTACAGCGACAACCTGTACCCTGAGAG 2720
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2721 CATCACGAGTAGGGACTGTGTCCAGCTGGGACCCCCTTCCGAGGGGGAGCTGGTGGAGCTCCGGTGGACTGACG 2794
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2795 GCAACCTCTACAAGGCCAAGTTCATCTCCTCCGTCACCAGCCACATCTACCAGGTGGAGTTTGAGGACGGGTCC 2868
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2869 CAGCTGACGGTGAAGCGTGGGGACATCTTCACCCTGGAGGAGGAGCTGCCCAAGAGGGTCCGCTCTCGGCTGTC 2942
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 2943 ACTGAGCACGGGGGCACCGCAGGAGCCCGCCTTCTCGGGGGAGGAGGCCAAGGCCGCCAAGCGCCCGCGTGTGG 3016
Query 1345 -------------------------------------------------------------------------- 1344
Sbjct 3017 GCACCCCGCTTGCCACGGAGGACTCCGGGCGGAGCCAGGACTACGTGGCCTTCGTGGAGAGCCTCCTGCAGGTG 3090
Query 1345 ------------------------ 1344
Sbjct 3091 CAGGGCCGGCCCGGAGCCCCCTTC 3114
