Nucleotide Global Alignment
Description
- Query:
- TRCN0000468663
- Subject:
- XM_005251389.5
- Aligned Length:
- 2790
- Identities:
- 1273
- Gaps:
- 1506
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGGAAGATCATGCAGCATGAGTCTCCACCGGACATCGGGAACCCCACAGGGGCCTAGGATGGTCAGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCATCACATTCCTGCCATCCGAGCCCACTCCGGGACTCCTGGCCCCTCGCCCTGTGGCAGCACATCGAGTCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTATGGCAAGCCTTGCTAACAACCTCCATCTCAAGATGCCCTCAGGAGGAGGGATGGCTCCTCAGAACAACGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGAGAGCCGCATCCATCTGCCTGCCTTAAGCCCCAGGAGACAAATGCTCACCAATGGGAAGCCGCGATTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCACCCAGGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAGCCCTTTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCAAATCCTGGGAAAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAAT 444
Query 1 ---------------------ATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTAC 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTAGTGGTCACCAGCAGTCCCATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTAC 518
Query 54 AGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATA 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATA 592
Query 128 CCAGGTCCCTTATTTCGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGC 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGGTCCCTTATTTCGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGC 666
Query 202 ATGAAGCAGGAGTGGTCCCAGGGCTACAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGA 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATGAAGCAGGAGTGGTCCCAGGGCTACAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGA 740
Query 276 TCTAGGGGATCTCCTTAGCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTGTCTCTAACTCATTACCATCCT 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTAGGGGATCTCCTTAGCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTGTCTCTAACTCATTACCATCCT 814
Query 350 ACCTTTTTGGCACGGAAAGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCC 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCTTTTTGGCACGGAAAGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCC 888
Query 424 CGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATGGCATCGGGATAGATTTCAATACCATCATCCG 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATGGCATCGGGATAGATTTCAATACCATCATCCG 962
Query 498 CACGTCGCCCACGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCCGG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACGTCGCCCACGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCCGG 1036
Query 572 AGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAG 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAG 1110
Query 646 GGCGTGCTGGTGGCCCCTGGAGGCCTGGCGCTGCCGGCCTACGGCGAGGACGGGGCCCTGGAGCACGAGCGCAT 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCGTGCTGGTGGCCCCTGGAGGCCTGGCGCTGCCGGCCTACGGCGAGGACGGGGCCCTGGAGCACGAGCGCAT 1184
Query 720 GCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCC 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCC 1258
Query 794 CCGACAGCCAGCCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTACCC 867
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTACCC 1332
Query 868 CCCGCGCCTCCGCTCCCTCCTCTGCCGCCGCCCCAAGGCCCCCCACCCCCTTACCATGCCCATGCGCACCTTCA 941
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCGCGCCTCCGCTCCCTCCTCTGCCGCCGCCCCCAGGCCCCCCACCCCCTTACCATGCCCATGCGCACCTTCA 1406
Query 942 CCACCCGGAGCTCGGGCCCCACGCCCAGCAGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACGGGGAGATGG 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCACCCGGAGCTCGGGCCCCACGCCCAGCAGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACGGGGAGATGG 1480
Query 1016 ACGGCATCGGGGGCAAGCATTGCTACCGCTGGATCGACTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTG 1089
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTG 1554
Query 1090 CGGCACATCGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGACTTCACTTGCTTCTGGGCCGGTTGCCCTCG 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CGGCACATCGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGACTTCACTTGCTTCTGGGCCGGTTGCCCTCG 1628
Query 1164 AAGATACAAGCCCTTCAACGCCCGCTATAAACTGCTGATCCACATGAGAGTCCACTCTGGGGAGAAGCCCAACA 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAGATACAAGCCCTTCAACGCCCGCTATAAACTGCTGATCCACATGAGAGTCCACTCTGGGGAGAAGCCCAACA 1702
Query 1238 AGTGTACGTTTGAAGGTTGCGAGAAGGCCTTTTCAAGGCTTGAAAATCTCAAGATCCACTTGCGGAGCCACACA 1311
||||||| ||..|||.|||| |..||.|||
Sbjct 1703 AGTGTAC---------------GACTGCCATTTC--------------------TGTACCTGC----------- 1730
Query 1312 GGCGAGAAGCCGTATTTGTGCCAGCATCCGGGTTGTCAGAAGGCCTTCAGTAACTCCAGTGACCGCGCCAAACA 1385
||||.|||| ||||| .||||
Sbjct 1731 ----AGAACCCGT---------------------------AGGCC-------------CTGAC----------- 1749
Query 1386 CCAGCGGACGCATCTGGACACCAAACCTTATGCTTGTCAAATTCCAGGATGTACCAAACGCTACACAGACCCAA 1459
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1460 GTTCCCTAAGAAAGCATGTGAAGGCACATTCTTCCAAAGAGCAACAAGCAAGGAAAAAGTTGCGGTCCAGCACA 1533
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1534 GAGCTCCATCCAGACCTGCTCACAGATTGCCTCACCGTGCAGTCCCTGCAGCCGGCCACTTCCCCTAGAGATGC 1607
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1608 TGCTGCTGAAGGGACCGTGGGACGCTCCCCTGGACCCGGGCCTGACCTCTATTCAGCTCCCATTTTCTCCAGCA 1681
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1682 ATTATTCAAGCCGAAGTGGAACAGCTGCTGGGGCCGTACCACCCCCACATCCTGTCAGTCACCCTTCTCCAGGA 1755
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1756 CATAATGTACAGGGGAGCCCTCACAACCCCTCCTCCCAGTTACCTCCACTCACAGCTGTGGACGCAGGAGCTGA 1829
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1830 GAGGTTTGCACCTTCTGCTCCATCTCCTCACCACATCAGCCCCCGGAGAGTTCCAGCTCCTTCTTCAATACTGC 1903
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1904 AAAGAACACAGCCTCCCTATACCCAGCAGCCATCAGGTTCACACCTGAAGTCCTATCAGCCAGAAACAAACTCT 1977
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 1978 TCTTTTCAACCAAATGGTATCCATGTCCATGGATTTTATGGGCAGCTGCAGAAGTTCTGTCCCCCACACTACCC 2051
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 2052 CGATTCCCAGAGAATTGTGCCGCCTGTCAGCTCCTGCAGTGTGGTGCCTTCGTTTGAGGACTGCCTAGTCCCTA 2125
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 2126 CATCCATGGGCCAGGCCAGTTTTGATGTTTTCCACAGAGCCTTCTCGACTCACTCGGGCATTACAGTGTATGAT 2199
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 2200 TTACCTTCAAGTTCCTCGAGCCTCTTTGGGGAGTCTCTCCGCAGCGGGGCTGAAGATGCTACCTTCTTGCAGAT 2273
Sbjct 1750 -------------------------------------------------------------------------- 1749
Query 2274 CAGCACCGTGGACCGCTGTCCTAGCCAGCTCTCCTCTGTCTGCACCGAAGGC 2325
Sbjct 1750 ---------------------------------------------------- 1749
