Nucleotide Global Alignment

Description

Query:
TRCN0000468663
Subject:
XM_006716731.3
Aligned Length:
2790
Identities:
1247
Gaps:
1539

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATGGAAGATCATGCAGCATGAGTCTCCACCGGACATCGGGAACCCCACAGGGGCCTAGGATGGTCAGTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCATCACATTCCTGCCATCCGAGCCCACTCCGGGACTCCTGGCCCCTCGCCCTGTGGCAGCACATCGAGTCCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTATGGCAAGCCTTGCTAACAACCTCCATCTCAAGATGCCCTCAGGAGGAGGGATGGCTCCTCAGAACAACGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTGAGAGCCGCATCCATCTGCCTGCCTTAAGCCCCAGGAGACAAATGCTCACCAATGGGAAGCCGCGATTCCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGTCACCCAGGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAGCCCTTTTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCCAAATCCTGGGAAAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAAT  444

Query    1  ---------------------ATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTAC  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTAGTGGTCACCAGCAGTCCCATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTAC  518

Query   54  AGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATA  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATA  592

Query  128  CCAGGTCCCTTATTTCGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGC  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAGGTCCCTTATTTCGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGC  666

Query  202  ATGAAGCAGGAGTGGTCCCAGGGCTACAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGA  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATGAAGCAGGAGTGGTCCCAGGGCTACAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGA  740

Query  276  TCTAGGGGATCTCCTTAGCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTGTCTCTAACTCATTACCATCCT  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCTAGGGGATCTCCTTAGCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTGTCTCTAACTCATTACCATCCT  814

Query  350  ACCTTTTTGGCACGGAAAGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCC  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACCTTTTTGGCACGGAAAGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCC  888

Query  424  CGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATGGCATCGGGATAGATTTCAATACCATCATCCG  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATGGCATCGGGATAGATTTCAATACCATCATCCG  962

Query  498  CACGTCGCCCACGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCCGG  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CACGTCGCCCACGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCCGG  1036

Query  572  AGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAG  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAG  1110

Query  646  GGCGTGCTGGTGGCCCCTGGAGGCCTGGCGCTGCCGGCCTACGGCGAGGACGGGGCCCTGGAGCACGAGCGCAT  719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGCGTGCTGGTGGCCCCTGGAGGCCTGGCGCTGCCGGCCTACGGCGAGGACGGGGCCCTGGAGCACGAGCGCAT  1184

Query  720  GCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCC  793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCC  1258

Query  794  CCGACAGCCAGCCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTACCC  867
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTACCC  1332

Query  868  CCCGCGCCTCCGCTCCCTCCTCTGCCGCCGCCCCAAGGCCCCCCACCCCCTTACCATGCCCATGCGCACCTTCA  941
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCCGCGCCTCCGCTCCCTCCTCTGCCGCCGCCCCCAGGCCCCCCACCCCCTTACCATGCCCATGCGCACCTTCA  1406

Query  942  CCACCCGGAGCTCGGGCCCCACGCCCAGCAGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACGGGGAGATGG  1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CCACCCGGAGCTCGGGCCCCACGCCCAGCAGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACGGGGAGATGG  1480

Query 1016  ACGGCATCGGGGGCAAGCATTGCTACCGCTGGATCGACTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTG  1089
            ||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTG  1554

Query 1090  CGGCACATCGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGACTTCACTTGCTTCTGGGCCGGTTGCCCTCG  1163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CGGCACATCGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGACTTCACTTGCTTCTGGGCCGGTTGCCCTCG  1628

Query 1164  AAGATACAAGCCCTTCAACGCCCGCTATAAACTGCTGATCCACATGAGAGTCCACTCTGGGGAGAAGCCCAACA  1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AAGATACAAGCCCTTCAACGCCCGCTATAAACTGCTGATCCACATGAGAGTCCACTCTGGGGAGAAGCCCAACA  1702

Query 1238  AGTGTACGTTTGAAGGTTGCGAGAAGGCCTTTTCAAGGCTTGAAAATCTCAAGATCCACTTGCGGAGCCACACA  1311
            ||||||||          || ||.|                                                 
Sbjct 1703  AGTGTACG----------GC-AGCA-------------------------------------------------  1716

Query 1312  GGCGAGAAGCCGTATTTGTGCCAGCATCCGGGTTGTCAGAAGGCCTTCAGTAACTCCAGTGACCGCGCCAAACA  1385
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1386  CCAGCGGACGCATCTGGACACCAAACCTTATGCTTGTCAAATTCCAGGATGTACCAAACGCTACACAGACCCAA  1459
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1460  GTTCCCTAAGAAAGCATGTGAAGGCACATTCTTCCAAAGAGCAACAAGCAAGGAAAAAGTTGCGGTCCAGCACA  1533
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1534  GAGCTCCATCCAGACCTGCTCACAGATTGCCTCACCGTGCAGTCCCTGCAGCCGGCCACTTCCCCTAGAGATGC  1607
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1608  TGCTGCTGAAGGGACCGTGGGACGCTCCCCTGGACCCGGGCCTGACCTCTATTCAGCTCCCATTTTCTCCAGCA  1681
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1682  ATTATTCAAGCCGAAGTGGAACAGCTGCTGGGGCCGTACCACCCCCACATCCTGTCAGTCACCCTTCTCCAGGA  1755
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1756  CATAATGTACAGGGGAGCCCTCACAACCCCTCCTCCCAGTTACCTCCACTCACAGCTGTGGACGCAGGAGCTGA  1829
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1830  GAGGTTTGCACCTTCTGCTCCATCTCCTCACCACATCAGCCCCCGGAGAGTTCCAGCTCCTTCTTCAATACTGC  1903
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1904  AAAGAACACAGCCTCCCTATACCCAGCAGCCATCAGGTTCACACCTGAAGTCCTATCAGCCAGAAACAAACTCT  1977
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 1978  TCTTTTCAACCAAATGGTATCCATGTCCATGGATTTTATGGGCAGCTGCAGAAGTTCTGTCCCCCACACTACCC  2051
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 2052  CGATTCCCAGAGAATTGTGCCGCCTGTCAGCTCCTGCAGTGTGGTGCCTTCGTTTGAGGACTGCCTAGTCCCTA  2125
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 2126  CATCCATGGGCCAGGCCAGTTTTGATGTTTTCCACAGAGCCTTCTCGACTCACTCGGGCATTACAGTGTATGAT  2199
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 2200  TTACCTTCAAGTTCCTCGAGCCTCTTTGGGGAGTCTCTCCGCAGCGGGGCTGAAGATGCTACCTTCTTGCAGAT  2273
                                                                                      
Sbjct 1717  --------------------------------------------------------------------------  1716

Query 2274  CAGCACCGTGGACCGCTGTCCTAGCCAGCTCTCCTCTGTCTGCACCGAAGGC  2325
                                                                
Sbjct 1717  ----------------------------------------------------  1716

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