Nucleotide Global Alignment

Description

Query:
TRCN0000468670
Subject:
XR_001783701.1
Aligned Length:
2780
Identities:
841
Gaps:
1799

Alignment

Query    1  --------------------------------------------------ATGGCCGTCACCGACAGCCTCA--  22
                                                              |||||.|.|.||..|..|||||  
Sbjct    1  CGGCACTCGCCCCGCCCCTTTGCTCTTCGGGGCGTGAGAAGCCGGCAAACATGGCGGCCCCCTGCTTCCTCACT  74

Query   23  --GCCG--GGCTGC---GACTGTCTTGGCAACTGTGTTGCTCTTGTCCTTCGGCAGCGTGGCCGCTAGTCATAT  89
              ||.|  ||||.|   |.|.|.||||||         |||||||||..||||||||...||||||.|.||.||
Sbjct   75  CTGCGGGTGGCTACCCTGGCCGCCTTGGC---------GCTCTTGTCTCTCGGCAGCTCTGCCGCTGGACACAT  139

Query   90  CGAGGATCAAGCAGAACAATTCTTTAGAAGTGGCCATACAAACAACTGGGCTGTTCTGGTGTGTACATCCCGAT  163
            ||||||||||||.|||||.||||||||||||||.||.|||||.||||||||||||.|||||||.||||||||||
Sbjct  140  CGAGGATCAAGCCGAACAGTTCTTTAGAAGTGGACACACAAATAACTGGGCTGTTTTGGTGTGCACATCCCGAT  213

Query  164  TCTGGTTTAATTATCGACATGTTGCAAATACCCTTTCTGTTTATAGAAGTGTCAAGAGGCTAGGTATTCCTGAC  237
            ||||||||||.||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||.||.|||
Sbjct  214  TCTGGTTTAACTACCGACATGTTGCAAATACTCTTTCTGTTTATAGAAGCGTCAAGAGGCTAGGTATCCCGGAC  287

Query  238  AGTCACATTGTCCTAATGCTTGCAGATGATATGGCCTGTAATCCTAGAAATCCCAAACCAGCTACAGTGTTTAG  311
            ||||||||||||||.||||||||.|||||.|||||.||.|||.||.|.||.|||||.|||||.||||||||.||
Sbjct  288  AGTCACATTGTCCTGATGCTTGCTGATGACATGGCGTGCAATGCTCGGAACCCCAAGCCAGCCACAGTGTTCAG  361

Query  312  TCACAAGAATATGGAACTAAATGTGTATGGAGATGATGTGGAAGTGGATTATAGAAGTTATGAGGTAACTGTGG  385
            .||||||||.|||||.||.||||||||||||||.||||||||||||||.||.|||||.||||||||||||||||
Sbjct  362  CCACAAGAACATGGAGCTCAATGTGTATGGAGACGATGTGGAAGTGGACTACAGAAGCTATGAGGTAACTGTGG  435

Query  386  AGAATTTTTTACGGGTATTAACTGGGGGGATCCCACCTAGTACTCCTCGGTCAAAACGTCTTCTTTCTGATGAC  459
            ||||.||||||.|||||||.||.|||.||.|.|||||.|||||.|||||.|||||.|||||||||||.||.|||
Sbjct  436  AGAACTTTTTAAGGGTATTGACCGGGAGGGTTCCACCCAGTACCCCTCGCTCAAAGCGTCTTCTTTCCGACGAC  509

Query  460  AGAAGCAATATTCTAATTTATATGACAGGGCATGGTGGAAATGGTTTCTTAAAATTTCAAGATTCTGAAGAAAT  533
            |||||||||||.||.||||||||||||||.|||||.||.|||||||||||.|||||.|||||||||||||||||
Sbjct  510  AGAAGCAATATCCTCATTTATATGACAGGTCATGGAGGGAATGGTTTCTTGAAATTCCAAGATTCTGAAGAAAT  583

Query  534  TACCAACATAGAACTCGCGGATGCTTTTGAACAAATGTGGCAGAAAAGACGCTACAATGAGCTACTGTTTATTA  607
            .||||||||||||||.||.|||||.||||||||.|||||||||||.|||||||||||||||||.|||||.||||
Sbjct  584  CACCAACATAGAACTTGCAGATGCGTTTGAACAGATGTGGCAGAAGAGACGCTACAATGAGCTGCTGTTCATTA  657

Query  608  TTGATACTTGCCAAGGAGCATCCATGTATGAACGATTTTATTCTCCTAACATAATGGCTCTAGCTAGTAGTCAA  681
            ||||.||||||||.||.||.||||||||.||.||.||.||.|||||||||||.|||||..|.||||||||.||.
Sbjct  658  TTGACACTTGCCAGGGCGCGTCCATGTACGAGCGGTTCTACTCTCCTAACATCATGGCCTTGGCTAGTAGCCAG  731

Query  682  GTGGGAGAAGATTCACTCTCGCATCAACCTGATCCTGCAATTGGAGTCCATCTTATGGATAGATACACATTTTA  755
            ||||||||.|||||.||.|||||.||.|||||.|||||.||||||||.||||||||||||||.|||||.|||||
Sbjct  732  GTGGGAGAGGATTCGCTGTCGCACCAGCCTGACCCTGCGATTGGAGTTCATCTTATGGATAGGTACACGTTTTA  805

Query  756  TGTCTTGGAATTTTTGGAAGAAATTAACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCA  829
            |||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||||||||||.||.|||||||
Sbjct  806  TGTCTTGGAATTTTTGGAAGAAATTAATCCAGCTAGCCAAACTAACATGAACGACCTTTTTCAAGTGTGTCCCA  879

Query  830  AAAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTTCAGAGGGATCCTAAAAATGTACTGATAACT  903
            |||||||.||||||||.||.|||||||||||||||||.|||||.|||.|.|||||.||||||||.|||||.||.
Sbjct  880  AAAGTCTCTGTGTGTCGACCCCTGGACATCGCACTGACCTTTTCCAGCGAGATCCAAAAAATGTCCTGATCACC  953

Query  904  GATTTCTTTGGAAGTGTACGGAAAGTGGAAATTACAACAGAGACTATTAAATTGCAACAGGATTCAGAAATCAT  977
            ||||||||.||||||||.||.||.||||||||.||||||||||..||.|..|||||...|||||||.||.||.|
Sbjct  954  GATTTCTTCGGAAGTGTGCGCAAGGTGGAAATCACAACAGAGAAGATCAGTTTGCAGTGGGATTCACAAGTCGT  1027

Query  978  GGAAAGCAGGTATTCATCT-------------------------------------------------------  996
            |||.|||||      .|||                                                       
Sbjct 1028  GGACAGCAG------TTCTAAAGAAGACGGCACGGCCGAGGAGCGCATGGGACCTCTCAAGTATGCTGAGCAGC  1095

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1096  TCCCGGTGGCTCAGATAATACACCAGGATGTAATCTCAGCTACCGCTTAAGCACCACATCTGCCTGTGTGCTGC  1169

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1170  CAGGCTCCCTGCCATGATCATCACGGACTAAACCTCTGAAACTGGGATTACAGCTAAGAGATTGCATGAATCTC  1243

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1244  AGAAGAGACTTTGAACTTTGGACTTTTCAACACGGTTGAGACTGTGGCTCCAAGAGGCTGACAAAGGCTTAGAC  1317

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1318  CTTCAACCACATTCCAAAGCAGGGGCCTTTTTCCTTATCCGCATGTTCCCAGGATGCCCCCTGAGAACCCTGCC  1391

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1392  TCAGCATCATTAGTAATAAGACACCATTTGTACCATTTGATAGAGAGGCTCGTAAGACTTTGTCACATCTTCCC  1465

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1466  AGAAGAATGACGCCAGGCTAATGACAAGAAAATATCAGATGTGTGGGAAATTCTACAAAGTGACTGAGCACCAA  1539

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1540  GAAGAGCTCTCCAAAGGTGACAAGGTCATGAAAGGCGAGAGACCTGAAGAGGCTGAGGGCACGAGCTTCCTGAC  1613

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1614  CGAGCTTGTCACAGCCCCTACAGATGAGGAGAGCATGAGCCCCACACTCTCGTGTTTCTGTCACGTGCAGCTGG  1687

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1688  ATAACCTGGATGGCTTGCTGCTCATCCCTGAGCCTCAGATTATCTACAAAGCAGGTACTAGATGCTCTGTCCCC  1761

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1762  TGGCCATTTGAGAATGTTAGAAAATATCCACAAAAGGGCCCCAGGCGCGGGCGGTGGTGACACATAGAGATCCC  1835

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1836  TCTCTTCTCCCCTGGCTGCTGGGGTGAGTGGACGAGGTAAACAATTTAGCATTCCTTCAGTGCTGTTTAGTGTC  1909

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1910  CAGGAAGAAGACCCTTCCAACCCTCTGGTGCTGGGGTCTGATGGAGGAGGTGCAGCCGTAGCCAGGGCAGCATT  1983

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 1984  TATAAAGAACAGAAGTGCCAGCTTTTGCAGGTGTTAGTATATTCCTTGCCGCTCTCTCACTAGGGCTACACCTT  2057

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2058  CATAAGGCTTTGGGCTAGAGGGCCTGGGAAGGAACTGAATGAGAATGGGAAGAGGAGGAAGAGCCCTCCTTTAA  2131

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2132  AGGGGAGCCCATGTGCGTACCTCTGCTGTGTTAATGTACTGGGCAGTTCTTCCCAGACTAGTCTGACAGAGCCC  2205

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2206  AGGAAAAACACAACCCTCACTCACATCCCAGAGATCCCTGAGAGATCTGGGAACCAATGGTCACACCCATACCT  2279

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2280  TCTGCCTTTCCATCCCCAGGAAACACCAACCAGGGCTTTCCTGGGAGCAGAAACTCCTGGGAAGTTTCCCTGTG  2353

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2354  ATGCCACAGCCTAGAATACAGGAGGATGTGCGGCCACAGGAAGGGGGTCTGCAGGTGGAAATGGGAAGAATACA  2427

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2428  AAGTGGAGGACTAGAAGAACTGAAGTGAGGCACTCTTTTAAGTGCCACTTAAAATTCCCCAGACTTCCTAAATA  2501

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2502  ATAGCCTTGGGATCACACACCATAGAAACGCAACTGCTTTGTTCTGTCTTCCTGAAAGAATCGGAACTCTTTTT  2575

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2576  TTTTTCCCCTCCAACAAAGGAATATCTACTGTTTTTACAGTTAATCAGCTGTAATGAAAGAATATGAAGAGCTG  2649

Query  997  --------------------------------------------------------------------------  996
                                                                                      
Sbjct 2650  TCATGTGCTTATTAGAGAAAATTAGCAGATATTCTTTTATATGATGAAGTAACACACTGAGCTGATAACGCTAT  2723

Query  997  ------------------------------------------  996
                                                      
Sbjct 2724  AGTGCACACTAAATTACAATTAAAGGCCTTTCTGCTCTGCCA  2765

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