Nucleotide Global Alignment
Description
- Query:
- TRCN0000468736
- Subject:
- XR_002956609.1
- Aligned Length:
- 2952
- Identities:
- 1102
- Gaps:
- 1849
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGAAAAGATGAAGAAAGCCAAGAAAAGGGACCAGAAGAGAAAGCAGAAAGACAGGAGGAAGAAAGGGAGAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCAGGCAGTCGCACTGTGAACAGAACAGGAGAAGGCGAAGCGGGGCAAAGTTCCCTGCCCACCGACGCCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCTTGGATGACTTGCCTCGTTTCATAATTCACTTACTGTCTGCACCAGCCGGCCTCCAGCCTGGCTGGACCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTGCCTGTGTGGCCCGGAGCCAGAGGCCCCCACACTCCCAGCTGCTCTTCTACAGATGCCATCAACGAGCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACTCTGGGTGGCTCCACTGTCTAAGCCTGGAGAGTCACCGCCGAGGGATGAGGACGCGCCAGCCCGGGGGAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGCCAGCTGCTTTCGCGGCCCCAAGCGCGCAGCGCCCAGCAGCCGCGCCGAGCCTGACACGCTGTCCTCTCCC 444
Query 1 -------------------------------------------------AT-GAACGGCTGCAGAAGCAACCAC 24
|| ||||||||||||||||||||||
Sbjct 445 CTCGCGCACAGGGCTCTGCGAGTGACCCGGCGGGCGAGCTCCGTGCTGCATGGAACGGCTGCAGAAGCAACCAC 518
Query 25 TTACCTCCCCCGGGAGCGTGAGCCCCTCCCGAGATTCCAGTGTGCCTGGCTCTCCCTCCAGCATCGTGGCCAAG 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTACCTCCCCCGGGAGCGTGAGCCCCTCCCGAGATTCCAGTGTGCCTGGCTCTCCCTCCAGCATCGTGGCCAAG 592
Query 99 ATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATCGAGCG 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATCGAGCG 666
Query 173 GCCCGACCTCATGATCTACGAGCCTCACTTTACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGCG 246
||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCCCGACCTCATGATCTACGAGCCTCACTTCACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGC- 739
Query 247 AGCGCTCGCTGTCACCCAAATCCACATCCCCCCCACCATCCCCAGAGGTGTGGGCGGACAGCCGGTCGCCTGGA 320
||||||||||||||||||||||||||||||
Sbjct 740 --------------------------------------------GAGGTGTGGGCGGACAGCCGGTCGCCTGGA 769
Query 321 ATCATCTCTCAGGCCTCGGCCCCCAGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGA 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 770 ATCATCTCTCAGGCCTCGGCCCCCAGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGA 843
Query 395 GACCTCCCGCCCAGATTCCAACATCTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCC 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844 GACCTCCCGCCCAGATTCCAACATCTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCC 917
Query 469 CTCAGACCAAGCACCTCATCGAGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCC 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 918 CTCAGACCAAGCACCTCATCGAGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCC 991
Query 543 AACCAGCCAGCCAAAATCGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAG 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 AACCAGCCAGCCAAAATCGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAG 1065
Query 617 GAAGCGGAAGGCGTCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGA 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 GAAGCGGAAGGCGTCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGA 1139
Query 691 AGGCTCTCAGGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAA 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 AGGCTCTCAGGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAA 1213
Query 765 GAGATGGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTT 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 GAGATGGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTT 1287
Query 839 GCACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCACAG 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 GCACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCACAG 1361
Query 913 AGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTGC-------------------------------- 954
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 AGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTGCAGGTGAGTGCCTCCTGGAGGGGAACAGGCAGA 1435
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1436 GCAGCAGAAGCTGGGTCCTGGCACCCGAAAGTGTCAGGGGAAGGGGGGTGTGGGGCCACAGAGTTGCCTGGTGA 1509
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1510 AGAAGAAGAAGCCGGGGTAAGGCTGGGAAGGTCTCCCTGCCCCGCTCTGGCTCACTGCGGCTTTGGTCTCCCCA 1583
Query 955 -----------------------------------------------------------------AGATCTATC 963
|||||||||
Sbjct 1584 GAACGGAGAGGGCCAGAGGGGGAGGATGGACCGGGGGAACTCCCTGCCCTGTGTGCTGGAGCAGAAGATCTATC 1657
Query 964 CCTATGAAATGCTAGTGGTGACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAG 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1658 CCTATGAAATGCTAGTGGTGACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAG 1731
Query 1038 AGGCATCTGTCTGCCGAGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTG 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1732 AGGCATCTGTCTGCCGAGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTG 1805
Query 1112 GAAGCGGAATGAGCTCAAGAAGAAGGCCTCTCTCTTC------------------------------------- 1148
|||||||||||||||||||||||||||||||||||||
Sbjct 1806 GAAGCGGAATGAGCTCAAGAAGAAGGCCTCTCTCTTCTGATGGCCCCCACCTGCTCCGGGACGGCCCCCTTACC 1879
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1880 CCTGCTGCTTCAGGGTTTTTCCCCGGCGGGTTGGGAGGGGCAGGAGGTGGGGTGGAAATAGGGTGGGCTCCTTT 1953
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1954 CCTCAGGTAGAGTGGGGGGCCAAAACCTCTGCAGTCCCCGGCAGTGAGCTATGGACTTTCTTCCCCCTCACAAG 2027
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2028 GCTGGGGGCCTCCTGCTCTCGTCCCTGGCCCTCCCTGCACAGGGCAAAGCCAGTCTGGGCTCTGGCACACAGAG 2101
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2102 TTCATGTTTGCGCCCTCTCCCTGCCCCTCACCCCAGAGGGTGAGGAGGAATGAGGGGCATTGGTGGTTAGGCCG 2175
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2176 GTTGGCTGTCTTGAACAGCTGGAGGGAAGATGCAGGGGTGGGAAGCGGCCAGGCAGAAAGAGCTCCAGGCTCTT 2249
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2250 GTGTCGCCCACCCAGCCCTCCCATACTCACTCCTGACAGCTTTCCTGCACTGCAGCCTCCTGCTCCTCTGACTC 2323
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2324 TAGTGGGAACAGGCCCCAGCTCAGCCTCCGGCAGGGAGGTCACCCCTCCACTTCAGCTTGCCCTGACCTCCGCT 2397
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2398 CGCAAACCCCGAGCTTCCAAGCCTTTTGCTCCAGCCCTGCGGCTTCCCCAGAAGCCTGGGCTTAGGGTGGAGAT 2471
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2472 GCCGCCTACACACGATCCTGGCCCTCCACCTGCCTCCAGGCCACGAAATGGGAATTCCAGCACTAAGCCAGGCA 2545
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2546 CCGGGCAGAAGCTGGGCCTTCCGCCTCCCTTGGATGGGGTCAAGAGGCCAGGCCTGGCACATTTTGGAGTGTCC 2619
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2620 TGGCTACCAGCTCTCACCTACACCCACGCACCCCCCCACACACTATGCTCTCTCAAGAATGTAATTTATTGGGG 2693
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2694 CCCCCCCAGCTGCTTTCCTCACCTGCCCCTGCCCTACCTTACACCCCCAGCTTGACTTCTTTCCAGTCCACGTG 2767
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2768 TGTATATAATGATATCTATATTTTTGCCCAGGTCTGGGTATTGCTCCTGCCCAGACCCTGACATCCCTTTCCAC 2841
Query 1149 ------------------------------------------------------------------ 1148
Sbjct 2842 TGTGTGTGTGACCATGCTGGGGGAGGGGGACTCTGCTTGGAATTAAAAGGTTGCATTGGGTCCCTA 2907
