Nucleotide Global Alignment
Description
- Query:
- TRCN0000468736
- Subject:
- XR_002956617.1
- Aligned Length:
- 2636
- Identities:
- 1072
- Gaps:
- 1537
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGATGCGCCGAGGGATGGAGGTGTATGTCACCGAGGAGGCTGCTGCGCTCCTGCCCCACGCCCTGGGCCCTTG 74
Query 1 ---------------------------------------------ATGAACG-----GCTGC------------ 12
..||||| |||||
Sbjct 75 AAGCCTGGAGAGTCACCGCCGAGGGATGAGGACGCGCCAGCCCGGGGGAACGCGCCAGCTGCTTTCGCGGCCCC 148
Query 13 -----AGAAGCAACCACTTACCTCCCCCGGGAGCGTGA------------GCCCCTCCCG---AG----ATTCC 62
.|.|||..|||....||.|.|| ||||.||| .||||||.|| || .|.|.
Sbjct 149 AAGCGCGCAGCGCCCAGCAGCCGCGCC---GAGCCTGACACGCTGTCCTCTCCCCTCGCGCACAGGGCTCTGCG 219
Query 63 AGTGTGCCTGGC------TCTCCCTCCAGCATCG------------TGGCCAAGATGGACAATCAGGTGCTGGG 118
|||| .||.||| .||||.|.|.||||.| .|||||||||||||||||||||||||||
Sbjct 220 AGTG-ACCCGGCGGGCGAGCTCCGTGCTGCATGGAACGGCTGCAGAAGGCCAAGATGGACAATCAGGTGCTGGG 292
Query 119 CTACAAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACG 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 CTACAAGGACCTGGCTGCCATCCCCAAGGACAAGGCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACG 366
Query 193 AGCCTCACTTTACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGCGAGCGCTCGCTGTCACCCAAA 266
||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 AGCCTCACTTCACTTATTCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGC--------------------- 419
Query 267 TCCACATCCCCCCCACCATCCCCAGAGGTGTGGGCGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGC 340
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 ------------------------GAGGTGTGGGCGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGC 469
Query 341 CCCCAGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 470 CCCCAGAACCACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCA 543
Query 415 ACATCTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATC 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 544 ACATCTACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATC 617
Query 489 GAGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAATCGA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 618 GAGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAATCGA 691
Query 563 AACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAGGAAGCGGAAGGCGTCTCGGA 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 692 AACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAGGAAGCGGAAGGCGTCTCGGA 765
Query 637 GGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGAAGGCTCTCAGGGAGCGTCAG 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 GGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGAAGGCTCTCAGGGAGCGTCAG 839
Query 711 AGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAAGAGATGGAAAAGTCATTGCC 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 AGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAAGAGATGGAAAAGTCATTGCC 913
Query 785 GATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTTGCACCAGGGAACGTCTAAAT 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 GATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTTGCACCAGGGAACGTCTAAAT 987
Query 859 CTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCACAGAGTTCAGCCCATCAGGGAGT 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 988 CTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCACAGAGTTCAGCCCATCAGGGAGT 1061
Query 933 GAGACTGGAAGCCCAGGCCTGC---------------------------------------------------- 954
||||||||||||||||||||||
Sbjct 1062 GAGACTGGAAGCCCAGGCCTGCAGGTGAGTGCCTCCTGGAGGGGAACAGGCAGAGCAGCAGAAGCTGGGTCCTG 1135
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1136 GCACCCGAAAGTGTCAGGGGAAGGGGGGTGTGGGGCCACAGAGTTGCCTGGTGAAGAAGAAGAAGCCGGGGTAA 1209
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1210 GGCTGGGAAGGTCTCCCTGCCCCGCTCTGGCTCACTGCGGCTTTGGTCTCCCCAGAACGGAGAGGGCCAGAGGG 1283
Query 955 ---------------------------------------------AGATCTATCCCTATGAAATGCTAGTGGTG 983
|||||||||||||||||||||||||||||
Sbjct 1284 GGAGGATGGACCGGGGGAACTCCCTGCCCTGTGTGCTGGAGCAGAAGATCTATCCCTATGAAATGCTAGTGGTG 1357
Query 984 ACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAGAGGCATCTGTCTGCCGAGGA 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 ACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAGAGGCATCTGTCTGCCGAGGA 1431
Query 1058 CTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTGGAAGCGGAATGAGCTCAAGA 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 CTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTGGAAGCGGAATGAGCTCAAGA 1505
Query 1132 AGAAGGCCTCTCTCTTC--------------------------------------------------------- 1148
|||||||||||||||||
Sbjct 1506 AGAAGGCCTCTCTCTTCTGATGGCCCCCACCTGCTCCGGGACGGCCCCCTTACCCCTGCTGCTTCAGGGTTTTT 1579
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1580 CCCCGGCGGGTTGGGAGGGGCAGGAGGTGGGGTGGAAATAGGGTGGGCTCCTTTCCTCAGGTAGAGTGGGGGGC 1653
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1654 CAAAACCTCTGCAGTCCCCGGCAGTGAGCTATGGACTTTCTTCCCCCTCACAAGGCTGGGGGCCTCCTGCTCTC 1727
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1728 GTCCCTGGCCCTCCCTGCACAGGGCAAAGCCAGTCTGGGCTCTGGCACACAGAGTTCATGTTTGCGCCCTCTCC 1801
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1802 CTGCCCCTCACCCCAGAGGGTGAGGAGGAATGAGGGGCATTGGTGGTTAGGCCGGTTGGCTGTCTTGAACAGCT 1875
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1876 GGAGGGAAGATGCAGGGGTGGGAAGCGGCCAGGCAGAAAGAGCTCCAGGCTCTTGTGTCGCCCACCCAGCCCTC 1949
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 1950 CCATACTCACTCCTGACAGCTTTCCTGCACTGCAGCCTCCTGCTCCTCTGACTCTAGTGGGAACAGGCCCCAGC 2023
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2024 TCAGCCTCCGGCAGGGAGGTCACCCCTCCACTTCAGCTTGCCCTGACCTCCGCTCGCAAACCCCGAGCTTCCAA 2097
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2098 GCCTTTTGCTCCAGCCCTGCGGCTTCCCCAGAAGCCTGGGCTTAGGGTGGAGATGCCGCCTACACACGATCCTG 2171
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2172 GCCCTCCACCTGCCTCCAGGCCACGAAATGGGAATTCCAGCACTAAGCCAGGCACCGGGCAGAAGCTGGGCCTT 2245
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2246 CCGCCTCCCTTGGATGGGGTCAAGAGGCCAGGCCTGGCACATTTTGGAGTGTCCTGGCTACCAGCTCTCACCTA 2319
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2320 CACCCACGCACCCCCCCACACACTATGCTCTCTCAAGAATGTAATTTATTGGGGCCCCCCCAGCTGCTTTCCTC 2393
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2394 ACCTGCCCCTGCCCTACCTTACACCCCCAGCTTGACTTCTTTCCAGTCCACGTGTGTATATAATGATATCTATA 2467
Query 1149 -------------------------------------------------------------------------- 1148
Sbjct 2468 TTTTTGCCCAGGTCTGGGTATTGCTCCTGCCCAGACCCTGACATCCCTTTCCACTGTGTGTGTGACCATGCTGG 2541
Query 1149 ---------------------------------------------- 1148
Sbjct 2542 GGGAGGGGGACTCTGCTTGGAATTAAAAGGTTGCATTGGGTCCCTA 2587
