Nucleotide Global Alignment

Description

Query:
TRCN0000468750
Subject:
XR_002958477.1
Aligned Length:
2560
Identities:
329
Gaps:
2205

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCACTTCCGGCGCACTGATCCCGCCTGGGGCCGGCTGAGTGGCACTTAAGCGGGCCATGCCATGCAACCTTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGCTGCCAACCGTGGGCGAGCTCTGGGTGTGCGGGCGGCCTGGCGCGGCGCTCCGATGGAGTCTAGTTCTGTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCCAGGCTGGAGCCCAGTGGTGTGATCTCAGCTCACTGCAATCTCCACCTCCTGGCTTCAAGCGATTCTTCTG  222

Query    1  -----------------------------ATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGT  45
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTTCAGCCTCCCGACTGTGTCAGCGTGTTATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGT  296

Query   46  AAAGTGAAATATTCAAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAA  119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAAGTGAAATATTCAAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAA  370

Query  120  GATCCCTTATAAGGCCATCGCACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCC  193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GATCCCTTATAAGGCCATCGCACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCC  444

Query  194  TCCTGCTGTCAGGCTACATCAGCAAAGGG-------------------GGG-----------GCAGACC-----  232
            |||||||||||||||||||||||||||||                   |||           ||.||||     
Sbjct  445  TCCTGCTGTCAGGCTACATCAGCAAAGGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAA  518

Query  233  ------------------GGG-------------------------------CCG-------------------  238
                              |||                               |||                   
Sbjct  519  CATCTACCAGCATCCCGTGGGTACATGATGGGAGGCATCAGTGGGAGGAGTCCCGAAGGAGGACTCAGCTCAAG  592

Query  239  --TTCCA-------------------------------------GTGCTGATCATTGGCATTCTGGT----GTT  269
              |||||                                     ||.||||.||.|||.|..|.|||    |||
Sbjct  593  GCTTCCAGAAGGAAGAGGAACACAGGTGTCATCACCTGACTGAGGTTCTGACCAATGGAACACAGGTGGAAGTT  666

Query  270  -------------CCT---ACCCGGA-----------------------------TTTTA-----CCACCTGC-  292
                         |||   |.|.|||                             |||||     |||||||| 
Sbjct  667  GTTGGAGAAAACGCCTTAAAACGGGAACAGCTGCAATATCAGCTGCAAGACATTCTTTTACCTTTCCACCTGCC  740

Query  293  ---------------------------GCATCGCTTACT--------------------ATGCAT---------  310
                                       ||.|.||..|||                    |||.||         
Sbjct  741  TGGGACCTGGATGTGGAACTGCAGTGTGCCTTGCAAACTTGAAGAGAACGACCTTGATAATGGATGGTGAAGCA  814

Query  311  -----------CCAAAGGCT-ACCGTGGTTACTCCTATGA----TGACATTCCAG-ACTTT-----GCTGAC--  360
                       ||..||||| |.||..||.||||     |    ||..||.|||| |||||     |||.|.  
Sbjct  815  AGAAAGAGGAGCCTGAGGCTGAGCGCAGTGACTC-----ACACCTGTAATCCCAGCACTTTGGGAGGCTAAGGT  883

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  884  GGGCAGATTGCTTGAGCCCAGGAATTTGAGACCAGCCTGGATAACGCGTGGTGGGCAGTTCCAGGACACCTGAC  957

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  958  ATGTTCCCACTGCAGAAACCACACGGGTTTCTCCAGCACCACTGAGACTTGCTCAGCCTGTGTAGAGTAGCCTG  1031

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1032  GACATACTGGGGCTTTATTTTCCTGAGGACAACCCTCAACCAATGAGTGCCAGGAATCATTTTGCCTTTTCTGG  1105

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1106  GATGCTCCAGAACTCTAGGAGGACAAAAAAGCCCTTCATGTCCAACATTAGAGGAAGGCAGCATCCTCCAAAGA  1179

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1180  AGAGTGACTCACCCTGACCAGCTGGCAGAGAAGCCCAAGGCCAGGCCCTGGGATGTGGAGAGCCAGTCCCAGCC  1253

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1254  TGGTCTGGAAGGAGGCGTGCCAGGGTGGCAATGATGCATCACCCACGTGGTTTACTGGCCTTGACTAACCTGAC  1327

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1328  CATGACTTAGCAAAGCTGTGAGGTTTCCCAGTCTGGGCCAATATGGGTGTGCGGGTAGAATACAGCCAGCATGG  1401

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1402  GGAGGCGAAGGCCTGAGCAGCATGCCAAAACCGGGAACTTGTGGCCTCCTTCGCCATCACCGCAGCCCCTCTCC  1475

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1476  ACCCTTCCTCACATCAGCCCCTGCTTCCCCGGTCATTCCAGGGACGGGGGTCTCCAGTGCAGCCCACTCCTCGT  1549

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1550  CATGGTATTACTCCAGTACAACTCCAATCTGACCTACAGTTTTGGTGTTTGGCATGGCAGGGGCGTGATCCCTA  1623

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1624  CTACATACAACCAGTGAGTCACAGACCTTTGGTCCAGTCTGTGGACTGGTCACTTCCTGTCCTTCATATGAGCT  1697

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1698  CCCACAGAACCCGGGTCCTGCTCCAGAGCCCAGGCGTTAGACAGGCCCTGGCCTTAACCCGGTTATCTCAGAGG  1771

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1772  CATCCCACATGCGTCCAGGACACCTGGGAAGCTGGTGGTAGTGAGGAGTGAAGGGCAGTAGGGGGCCTCTGCTC  1845

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1846  TGGCCCCCTGGCTTCCTGCAAGCCAGGAAAATAGGCCCCACTCACAGCCACTTCTCCCCTGCTGGCTAGCCTCA  1919

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1920  AAGAGATCATTAGAGGGACTTTGCTGCCCATAACAACAAGGACCATTGGTGAAAACAAGCAGCTCAGGGAAATG  1993

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1994  GATCATGGAAATCACAGAAACAGAGATTTCTCTGTTCCCATCCCCTAAGATCACCAGTGCCCCTGCTCCTGACA  2067

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 2068  ATTGGTCACCTCTCAGCCAACATCTGAGCCTCTGGTGTCCCTTCCTTGTGACAGAGTTCATGATACTCATGGGT  2141

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 2142  TATTTCAATGCATTGGGAAGTTAATCTTTTTTTTTTTGAGAGATGGGGTCTTGCCATGTTGCCTAGGCTGTTCT  2215

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 2216  CAAACTCGAGCTCAGGTGATCTTTCCCACCTCGGCCTCCCAAAGTGCTGGGATCACAGGTGAGAGCCACCACAC  2289

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 2290  CTGGCTGAGGAAGTTAGTCTTTATAATGAGACTAAACCTGCCTTCCTATATTTTTCATCTTTTCATGTGCTTAT  2363

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 2364  TGGATATTTGCATTTCATTCATGGAAAAAAAAAGATATCTTTTTGGTTTTTGTTTTTTTAATAGAGATGAGATC  2437

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 2438  TCACTTTGTTGGCCCAGGCTGGTCTCAAACTCCTAAGCTCAAGTGATCTTCCCACCTTGGTCTCCCAAAGTGCT  2511

Query  361  --------------------------------------------  360
                                                        
Sbjct 2512  GGGATTACAGGCATGAGCCACCACGCCTAGCCCCTGGTATTTTT  2555

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