Nucleotide Global Alignment
Description
- Query:
- TRCN0000468758
- Subject:
- NM_001277295.1
- Aligned Length:
- 3251
- Identities:
- 1671
- Gaps:
- 1378
Alignment
Query 1 ATGATAGCTGTCTCTTTTAAATGCCGTTGTCAAATTCTGAGGCGACTTACTAAAGATGAGAGTCCCTACACTAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ATCCGCCAGCCAGACAAAGCCGCCTGATGGAGCGTTGGCTGTGAGGAGACAGAGCATCCCAGAGGAATTCAAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCTCCACAGTCGTCGAGCTGATGAAGAAGGAAGGCACTACCCTGGGTCTGACGGTATCGGGAGGAATTGATAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GATGGCAAGCCAAGAGTATCTAATCTGCGGCAAGGAGGAATTGCTGCTAGAAGTGACCAGCTGGATGTGGGTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTACATCAAAGCAGTGAATGGAATCAACCTGGCCAAATTCCGCCATGACGAGATCATCAGCTTGCTGAAGAATG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGGGAGAAAGAGTGGTTCTTGAAGTAGAGTACGAGCTTCCACCGGTCTCTGTGCAAGGATCAAGTGTTATTTTC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CGAACAGTGGAGGTCACATTACATAAAGAAGGCAATACCTTTGGTTTTGTAATTCGAGGGGGAGCACATGATGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TAGAAATAAATCTCGTCCAGTTGTGATAACATGTGTTCGTCCTGGAGGGCCTGCTGACAGAGAGGGCACGATCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AACCCGGTGACAGGTTGCTCAGTGTGGATGGAATTCGGCTTCTTGGAACTACGCATGCTGAAGCCATGAGTATT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTTAAACAATGTGGACAAGAAGCAGCACTGCTGATAGAATATGATGTCTCAGTAATGGACTCTGTGGCAACAGC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 ATCCGGGCCACTACTAGTCGAAGTTGCCAAAACTCCTGGTGCCAGCCTTGGGGTTGCCCTAACTACCTCGATGT 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GCTGTAACAAACAAGTCATTGTCATAGACAAAATCAAATCTGCAAGTATTGCAGACAGATGTGGCGCATTGCAT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GTGGGAGATCACATCCTCTCCATCGATGGAACCAGCATGGAGTACTGTACACTTGCAGAAGCAACCCAGTTCCT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGCCAACACCACTGACCAGGTCAAGCTTGAGATCCTTCCCCATCATCAGACCCGGCTGGCCCTAAAGGGGCCCG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 ACCATGCAGCTTTGGTGTCTTCATCCTTCTCTCCTACCTCCATGAGTGC-ATACAGCCTGAGTTCCCTGAA--C 1107
||||..|| |.|| ||| ||||| .
Sbjct 1 -----------------------------------------ATGACAGCAAAAC-----GAG----CTGAAAGG 24
Query 1108 ATGGGGACTCTACCTCGAAG----CCTCTA--CTCCACCAGCC--CACGTGGAACCATGATGAGGAGGAGACT- 1172
|.||.|| .|||| ||..|| .|.||||..|| ..||| |||| ||
Sbjct 25 AAGGAGA--------TGAAGAGACCCAATAGTTTTCACCTTCCTTTTCGT----CCAT-------------CTT 73
Query 1173 ---GAAAAAGA---AAGACTTCAAA----AGCTCAT-TGTCCTTAGCCTCCAGCACAGTAGGATTGGCTGGGCA 1235
|||||.|| |||| ||| ||||||| ||||.||||||||||||||.||.||.||||||||.||
Sbjct 74 TAAGAAAAGGACAGAAGA----AAAACGCAGCTCATGTGTCTTTAGCCTCCAGCACTGTGGGGTTGGCTGGCCA 143
Query 1236 GGTTGTTCACACAGAAACCACAGAGGTTGTGCTGACGGCAGATCCTGTCACAGGATTTGGGATCCAACTGCAGG 1309
|||.||||||||.||||||||||||||||||||||||||.||.||||||||.||.||.||.|||||||||||||
Sbjct 144 GGTCGTTCACACTGAAACCACAGAGGTTGTGCTGACGGCTGACCCTGTCACGGGCTTCGGAATCCAACTGCAGG 217
Query 1310 GCAGTGTGTTTGCCACAGAAACTCTCTCTTCTCCACCTCTGATTTCCTATATCGAAGCTGACAGCCCAGCAGAG 1383
||||.||||||||||||||.||.|||||.|||||.|||||||||||||||||.|||||||||||||||||||||
Sbjct 218 GCAGCGTGTTTGCCACAGAGACGCTCTCCTCTCCGCCTCTGATTTCCTATATTGAAGCTGACAGCCCAGCAGAG 291
Query 1384 AGATGTGGGGTGCTACAGATTGGAGACAGAGTGATGGCCATCAATGGAATTCCAACAGAAGACAGCACCTTCGA 1457
||||||||.|||||||||||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||
Sbjct 292 AGATGTGGTGTGCTACAGATTGGAGACAGAGTCATGGCCATTAATGGAATCCCAACAGAAGACAGCACCTTCGA 365
Query 1458 AGAAGCCAGTCAGCTCCTCCGAGACTCTTCAATCACGAGCAAGGTCACACTGGAAATCGAGTTTGATGTTGCAG 1531
.|||||||.|||.|||||..||||||||||.|||||||||||.||||||||.||||||||||||||||||||||
Sbjct 366 GGAAGCCAATCAACTCCTGAGAGACTCTTCCATCACGAGCAAAGTCACACTAGAAATCGAGTTTGATGTTGCAG 439
Query 1532 AGTCTGTCATCCCAAGTAGTGGAACATTTCATGTAAAGCTGCCTAAGAAGCACAATGTGGAACTTGGAATAACC 1605
|||||||||||||||||||||||||||||||||||||.|||||.||||||||||..||||||||||||||||||
Sbjct 440 AGTCTGTCATCCCAAGTAGTGGAACATTTCATGTAAAACTGCCCAAGAAGCACAGCGTGGAACTTGGAATAACC 513
Query 1606 ATAAGTTCACCATCCAGTAGAAAACCAGGAGACCCCCTCGTCATTTCAGATATCAAGAAAGGGAGTGTGGCACA 1679
||.|||||.|||||||||||||||||.||.||||||||.|||||||||||||||||||||||.|||||||||||
Sbjct 514 ATCAGTTCGCCATCCAGTAGAAAACCGGGGGACCCCCTTGTCATTTCAGATATCAAGAAAGGCAGTGTGGCACA 587
Query 1680 CAGAACTGGGACCCTGGAACTTGGGGATAAATTGCTCGCAATAGATAATATCCGGCTGGACAACTGTTCCATGG 1753
||||||.||.||.||||||||.||.||.|||.||||.||.||||||||.|||||||||||.|||||||||||||
Sbjct 588 CAGAACCGGAACTCTGGAACTGGGAGACAAACTGCTTGCGATAGATAACATCCGGCTGGATAACTGTTCCATGG 661
Query 1754 AAGATGCAGTTCAGATCCTCCAGCAATGTGAAGACCTGGTGAAGCTCAAAATCCGCAAAGATGAAGATAATTCA 1827
|||||||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 662 AAGATGCGGTCCAGATCCTCCAGCAGTGTGAAGACCTGGTGAAGCTCAAAATCCGCAAAGATGAAGATAACTCA 735
Query 1828 GATGAGCAAGAAAGTTCCGGAGCAATTATTTACACCGTGGAGCTTAAACGCTACGGGGGGCCCCTTGGCATCAC 1901
||.||||||||.|||||||||||.|||||||||||.||||||||.||.|||||.||||||||||||||||||||
Sbjct 736 GACGAGCAAGAGAGTTCCGGAGCGATTATTTACACGGTGGAGCTGAAGCGCTATGGGGGGCCCCTTGGCATCAC 809
Query 1902 AATTTCAGGAACTGAAGAGCCGTTTGATCCTATAATCATTTCAAGCCTCACTAAAGGGGGATTAGCTGAAAGAA 1975
||||||.||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||||||||||||.|
Sbjct 810 AATTTCTGGAACTGAAGAGCCGTTTGATCCTATTATCATCTCGAGCCTCACTAAAGGGGGATTAGCTGAAAGGA 883
Query 1976 CTGGCGCAATCCACATAGGAGACCGAATCCTAGCCATCAATAGCAGCAGCTTGAAAGGGAAGCCTCTGAGTGAA 2049
||||.||.||||||||.|||||..|||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 884 CTGGAGCGATCCACATCGGAGATAGAATCCTAGCCATCAATAGCAGCAGCTTGAAGGGGAAGCCTCTGAGTGAA 957
Query 2050 GCCATCCATTTGTTACAGATGGCAGGAGAGACTGTCACCTTGAAAATTAAGAAACAGACAGATGCCCAGTCAGC 2123
||||||||.|||.|.||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 958 GCCATCCACTTGCTCCAGATGGCAGGAGAGACTGTCACCCTGAAAATTAAGAAACAGACAGATG---------- 1021
Query 2124 ATCGAGCCCCAAGAAGTTCCCTATTTCTAGCCATTTGAGTGACCTGGGGGATGTGGAGGAGGACTCCTCACCAG 2197
Sbjct 1022 -------------------------------------------------------------------------- 1021
Query 2198 CACAGAAGCCAGGCAAGCTCTCCGACATGTACCCCTCCACGGTGCCCAGTGTGGACAGTGCTGTGGATTCATGG 2271
||||
Sbjct 1022 ----------------GCTC------------------------------------------------------ 1025
Query 2272 GATGGGTCTGCAATAGACACCAGCTATGGAACTGAAGGCACTAGTTTTCAGGCCTCAGGATACAATTTCAACAC 2345
||| |||||||.|.|||||||||||||.||||||
Sbjct 1026 -----------------------------AAC------------TTTTCAGACTTCAGGATACAATTACAACAC 1058
Query 2346 CTATGACTGGAGGAGTCCAAAACAGAGAGGCAGCTTGTCCCCAGTCACTAAGCCTCGAAGCCAGACTTACCCAG 2419
||||||.||||||||||||||.||.|||..||||.|||||||||||.|.|||||||||||||||||.|||||||
Sbjct 1059 CTATGATTGGAGGAGTCCAAAGCAAAGAACCAGCCTGTCCCCAGTCCCCAAGCCTCGAAGCCAGACGTACCCAG 1132
Query 2420 ATGTGGGGCTGAGTTATGAAGACTGGGACCGGTCCACAGCCAGTGGTTTTGCAGGGGCTGCCGATAGTGCAGAG 2493
|||||||.||||||.|||||||||||||.||.||||||||||||||.||||.|||||||.|.||.||||||||.
Sbjct 1133 ATGTGGGCCTGAGTAATGAAGACTGGGATCGATCCACAGCCAGTGGCTTTGTAGGGGCTTCTGACAGTGCAGAT 1206
Query 2494 ACAGAACAAGAGGAGAACTTCTGGTCTCAAGCGCTGGAGGATTTGGAAACCTGCGGACAGTCAGGAATTCTGAG 2567
.|.|||||||||||.|||||||||||||||||..|||||||..||||.||||||||.|||||.||.||.|||||
Sbjct 1207 GCTGAACAAGAGGAAAACTTCTGGTCTCAAGCATTGGAGGACCTGGAGACCTGCGGCCAGTCGGGGATCCTGAG 1280
Query 2568 AGAACTGGAGGAGAAAGCTGACAGGCGTGTGTCTTTGAGAAACATGACTCTCTTGGCAACAATCATGTCGGGGA 2641
|||.||.|| ||||||||||||||||||||
Sbjct 1281 AGAGCTTGA---------------------------------------------GGCAACAATCATGTCGGGGA 1309
Query 2642 GCACGATGAGTTTGAATCATGAGGCTCCAACACCTCGCAGTCAGCTGGGGCGACAGGCCAGCTTCCAGGAGCGC 2715
|.||.|||||||||||||||||||||||||...|||||||||||||||||||||||||||||||||||||.||.
Sbjct 1310 GTACTATGAGTTTGAATCATGAGGCTCCAATGGCTCGCAGTCAGCTGGGGCGACAGGCCAGCTTCCAGGAACGG 1383
Query 2716 AGCAGCTCGCGGCCGCACTACAGCCAAACAACTCGGAGCAACACCCTGCCTTCAGATGTGGGTAGGAAGTCAGT 2789
|||||.||.|||||.|||||.||||||||||||||.||||||||||||||.|||||.|||||.||.|||||.||
Sbjct 1384 AGCAGTTCACGGCCACACTATAGCCAAACAACTCGCAGCAACACCCTGCCCTCAGACGTGGGCAGAAAGTCTGT 1457
Query 2790 AACCCTGAGAAAAATGAAACAAGAAATAAAGGAGATCATGTCTCCAACTCCTGTGGAGCTGCACAAGGTGACCT 2863
|||||||.|.||||||||.|||||||||||||||||||||||.||||||||.||||||||.|||||||||||||
Sbjct 1458 AACCCTGCGGAAAATGAAGCAAGAAATAAAGGAGATCATGTCCCCAACTCCGGTGGAGCTACACAAGGTGACCT 1531
Query 2864 TGTACAAGGACTCTGACATGGAGGACTTTGGGTTCAGTGTAGCAGATGGCTTACTGGAGAAAGGAGTGTATGTC 2937
|.|||||||||||||.||||||||||||.|||||||||||.|||||||||.|.|||||||||||.|||||||||
Sbjct 1532 TATACAAGGACTCTGGCATGGAGGACTTCGGGTTCAGTGTGGCAGATGGCCTGCTGGAGAAAGGCGTGTATGTC 1605
Query 2938 AAAAATATTCGCCCAGCTGGGCCAGGAGATCTTGGTGGCTTAAAGCCCTATGACAGGCTCTTACAGGTGAATCA 3011
||||||||.|||||||||||||||||.|||.||||.|||||.||||||||.|||||||||||||||||.|||||
Sbjct 1606 AAAAATATCCGCCCAGCTGGGCCAGGTGATGTTGGGGGCTTGAAGCCCTACGACAGGCTCTTACAGGTAAATCA 1679
Query 3012 TGTCCGAACCAGAGACTTTGACTGCTGCCTTGTTGTGCCCCTCATAGCAGAATCCGGGAATAAGCTGGACCTGG 3085
.||.||.||.||||||||||||||||||||.||.|||||.||||||||.|||||.||.||.|||||||||||||
Sbjct 1680 CGTGCGGACGAGAGACTTTGACTGCTGCCTGGTGGTGCCTCTCATAGCTGAATCTGGCAACAAGCTGGACCTGG 1753
Query 3086 TTATTAGTAGAAACCCACTGGCTTCACAGAAGTCTATAGACCAACAGAGTCTACCAGGAGATTGGAGTGAACAG 3159
|||||||.|||||.||||||||.||.||||||||.|||||.||.|.|..|||.||..|.||.|||||.||||||
Sbjct 1754 TTATTAGCAGAAATCCACTGGCCTCCCAGAAGTCGATAGAACAGCCGGCTCTGCCCAGCGACTGGAGCGAACAG 1827
Query 3160 AACAGTGCTTTTTTCCAGCAGCCTAGCCACGGTGGTAATTTGGAGACACGAGAACCCACTAATACATTA 3228
|||||.|||||.||||||||.||.|||||||||||||||.|.||||||||||||||||||||.|||.||
Sbjct 1828 AACAGCGCTTTCTTCCAGCAACCCAGCCACGGTGGTAATCTAGAGACACGAGAACCCACTAACACACTA 1896
