Nucleotide Global Alignment

Description

Query:
TRCN0000468758
Subject:
NR_102387.1
Aligned Length:
3739
Identities:
1807
Gaps:
1687

Alignment

Query    1  ATGATAGCTGTCTCTTTTAAATGCCGTTGTCAAATTCTGAGGCGACTTACTAAAGATGAGAGTCCCTACACTAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATCCGCCAGCCAGACAAAGCCGCCTGATGGAGCGTTGGCTGTGAGGAGACAGAGCATCCCAGAGGAATTCAAGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCTCCACAGTCGTCGAGCTGATGAAGAAGGAAGGCACTACCCTGGGTCTGACGGTATCGGGAGGAATTGATAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GATGGCAAGCCAAGAGTATCTAATCTGCGGCAAGGAGGAATTGCTGCTAGAAGTGACCAGCTGGATGTGGGTGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTACATCAAAGCAGTGAATGGAATCAACCTGGCCAAATTCCGCCATGACGAGATCATCAGCTTGCTGAAGAATG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGGGAGAAAGAGTGGTTCTTGAAGTAGAGTACGAGCTTCCACCGGTCTCTGTGCAAGGATCAAGTGTTATTTTC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CGAACAGTGGAGGTCACATTACATAAAGAAGGCAATACCTTTGGTTTTGTAATTCGAGGGGGAGCACATGATGA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TAGAAATAAATCTCGTCCAGTTGTGATAACATGTGTTCGTCCTGGAGGGCCTGCTGACAGAGAGGGCACGATCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  AACCCGGTGACAGGTTGCTCAGTGTGGATGGAATTCGGCTTCTTGGAACTACGCATGCTGAAGCCATGAGTATT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CTTAAACAATGTGGACAAGAAGCAGCACTGCTGATAGAATATGATGTCTCAGTAATGGACTCTGTGGCAACAGC  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  ATCCGGGCCACTACTAGTCGAAGTTGCCAAAACTCCTGGTGCCAGCCTTGGGGTTGCCCTAACTACCTCGATGT  814
                                     .|||            ||||.|.||             ||||      |
Sbjct    1  -------------------------ACCA------------CCAGACCTG-------------TACC------T  18

Query  815  GCTGTAACAAACAAGTCATTGTCATAGACAAAATCAAATCTGC------AAGTATTGCAGACAGATGTGGCGCA  882
            .||..|.|||.||||.|..||.|              .|||||      ||.||||                ||
Sbjct   19  TCTTCAGCAACCAAGGCTATGGC--------------TTCTGCCAGTGTAACTATT----------------CA  62

Query  883  TTGCATGTGGGAG--ATCACATCCTCTCCATCGATGGAACCAGCAT--GGAGTACTGTACAC----TTGCAGAA  948
            .|||||.|   ||  .|.||.||||||.||  ||...|.|||  ||  |||| ||  |||||    ||      
Sbjct   63  CTGCATCT---AGCCCTTACCTCCTCTGCA--GACAAAGCCA--ATGGGGAG-AC--TACACCTGTTT------  120

Query  949  GCAACCCAGTT--CCTGGCCAACACCACTGACCAGGTCAAGCTTGAGATCCTTCCCCATCATCAGACCCGGCTG  1020
                 ||||||  |||     |||..|..||       |||               ||.||.|||.|       
Sbjct  121  -----CCAGTTAACCT-----ACATTATAGA-------AAG---------------CAGCAGCAGTC-------  155

Query 1021  GCCCTAAAGGGG----CCCGACCATG-CAGCTTTGGTGTCTT-------CATCCTTCTCTCCTACCTCCATGAG  1082
                   |||.|    |||.|..||| |  |||| ||.||||       |||||.|..||.|||       |||
Sbjct  156  -------AGGAGGCATCCCCAGAATGTC--CTTT-GTTTCTTTGGTCACCATCCCTTGCTTCTA-------GAG  212

Query 1083  TGCAT-ACAGC----CTGAGTTCCCTGAA--CATGGGGACTCTACCTCGAAG----CCTCTA--CTCCACCAGC  1143
            ...|| |||||    | |||    |||||  .|.||.||        .||||    ||..||  .|.||||..|
Sbjct  213  AAGATGACAGCAAAAC-GAG----CTGAAAGGAAGGAGA--------TGAAGAGACCCAATAGTTTTCACCTTC  273

Query 1144  C--CACGTGGAACCATGATGAGGAGGAGACT----GAAAAAGA---AAGACTTCAAA----AGCTCAT-TGTCC  1203
            |  ..|||    ||||             ||    |||||.||   ||||    |||    ||||||| ||||.
Sbjct  274  CTTTTCGT----CCAT-------------CTTTAAGAAAAGGACAGAAGA----AAAACGCAGCTCATGTGTCT  326

Query 1204  TTAGCCTCCAGCACAGTAGGATTGGCTGGGCAGGTTGTTCACACAGAAACCACAGAGGTTGTGCTGACGGCAGA  1277
            ||||||||||||||.||.||.||||||||.|||||.||||||||.||||||||||||||||||||||||||.||
Sbjct  327  TTAGCCTCCAGCACTGTGGGGTTGGCTGGCCAGGTCGTTCACACTGAAACCACAGAGGTTGTGCTGACGGCTGA  400

Query 1278  TCCTGTCACAGGATTTGGGATCCAACTGCAGGGCAGTGTGTTTGCCACAGAAACTCTCTCTTCTCCACCTCTGA  1351
            .||||||||.||.||.||.|||||||||||||||||.||||||||||||||.||.|||||.|||||.|||||||
Sbjct  401  CCCTGTCACGGGCTTCGGAATCCAACTGCAGGGCAGCGTGTTTGCCACAGAGACGCTCTCCTCTCCGCCTCTGA  474

Query 1352  TTTCCTATATCGAAGCTGACAGCCCAGCAGAGAGATGTGGGGTGCTACAGATTGGAGACAGAGTGATGGCCATC  1425
            ||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||.
Sbjct  475  TTTCCTATATTGAAGCTGACAGCCCAGCAGAGAGATGTGGTGTGCTACAGATTGGAGACAGAGTCATGGCCATT  548

Query 1426  AATGGAATTCCAACAGAAGACAGCACCTTCGAAGAAGCCAGTCAGCTCCTCCGAGACTCTTCAATCACGAGCAA  1499
            ||||||||.|||||||||||||||||||||||.|||||||.|||.|||||..||||||||||.|||||||||||
Sbjct  549  AATGGAATCCCAACAGAAGACAGCACCTTCGAGGAAGCCAATCAACTCCTGAGAGACTCTTCCATCACGAGCAA  622

Query 1500  GGTCACACTGGAAATCGAGTTTGATGTTGCAGAGTCTGTCATCCCAAGTAGTGGAACATTTCATGTAAAGCTGC  1573
            .||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  623  AGTCACACTAGAAATCGAGTTTGATGTTGCAGAGTCTGTCATCCCAAGTAGTGGAACATTTCATGTAAAACTGC  696

Query 1574  CTAAGAAGCACAATGTGGAACTTGGAATAACCATAAGTTCACCATCCAGTAGAAAACCAGGAGACCCCCTCGTC  1647
            |.||||||||||..||||||||||||||||||||.|||||.|||||||||||||||||.||.||||||||.|||
Sbjct  697  CCAAGAAGCACAGCGTGGAACTTGGAATAACCATCAGTTCGCCATCCAGTAGAAAACCGGGGGACCCCCTTGTC  770

Query 1648  ATTTCAGATATCAAGAAAGGGAGTGTGGCACACAGAACTGGGACCCTGGAACTTGGGGATAAATTGCTCGCAAT  1721
            ||||||||||||||||||||.|||||||||||||||||.||.||.||||||||.||.||.|||.||||.||.||
Sbjct  771  ATTTCAGATATCAAGAAAGGCAGTGTGGCACACAGAACCGGAACTCTGGAACTGGGAGACAAACTGCTTGCGAT  844

Query 1722  AGATAATATCCGGCTGGACAACTGTTCCATGGAAGATGCAGTTCAGATCCTCCAGCAATGTGAAGACCTGGTGA  1795
            ||||||.|||||||||||.||||||||||||||||||||.||.||||||||||||||.||||||||||||||||
Sbjct  845  AGATAACATCCGGCTGGATAACTGTTCCATGGAAGATGCGGTCCAGATCCTCCAGCAGTGTGAAGACCTGGTGA  918

Query 1796  AGCTCAAAATCCGCAAAGATGAAGATAATTCAGATGAGCAAGAAAGTTCCGGAGCAATTATTTACACCGTGGAG  1869
            ||||||||||||||||||||||||||||.|||||.||||||||.|||||||||||.|||||||||||.||||||
Sbjct  919  AGCTCAAAATCCGCAAAGATGAAGATAACTCAGACGAGCAAGAGAGTTCCGGAGCGATTATTTACACGGTGGAG  992

Query 1870  CTTAAACGCTACGGGGGGCCCCTTGGCATCACAATTTCAGGAACTGAAGAGCCGTTTGATCCTATAATCATTTC  1943
            ||.||.|||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.||
Sbjct  993  CTGAAGCGCTATGGGGGGCCCCTTGGCATCACAATTTCTGGAACTGAAGAGCCGTTTGATCCTATTATCATCTC  1066

Query 1944  AAGCCTCACTAAAGGGGGATTAGCTGAAAGAACTGGCGCAATCCACATAGGAGACCGAATCCTAGCCATCAATA  2017
            .|||||||||||||||||||||||||||||.|||||.||.||||||||.|||||..||||||||||||||||||
Sbjct 1067  GAGCCTCACTAAAGGGGGATTAGCTGAAAGGACTGGAGCGATCCACATCGGAGATAGAATCCTAGCCATCAATA  1140

Query 2018  GCAGCAGCTTGAAAGGGAAGCCTCTGAGTGAAGCCATCCATTTGTTACAGATGGCAGGAGAGACTGTCACCTTG  2091
            |||||||||||||.||||||||||||||||||||||||||.|||.|.||||||||||||||||||||||||.||
Sbjct 1141  GCAGCAGCTTGAAGGGGAAGCCTCTGAGTGAAGCCATCCACTTGCTCCAGATGGCAGGAGAGACTGTCACCCTG  1214

Query 2092  AAAATTAAGAAACAGACAGATGCCCAGTCAGCATCGAGCCCCAAGAAGTTCCCTATTTCTAGCCATTTGAGTGA  2165
            ||||||||||||||||||||||                                                    
Sbjct 1215  AAAATTAAGAAACAGACAGATG----------------------------------------------------  1236

Query 2166  CCTGGGGGATGTGGAGGAGGACTCCTCACCAGCACAGAAGCCAGGCAAGCTCTCCGACATGTACCCCTCCACGG  2239
                                                            ||||                      
Sbjct 1237  ------------------------------------------------GCTC----------------------  1240

Query 2240  TGCCCAGTGTGGACAGTGCTGTGGATTCATGGGATGGGTCTGCAATAGACACCAGCTATGGAACTGAAGGCACT  2313
                                                                         |||          
Sbjct 1241  -------------------------------------------------------------AAC----------  1243

Query 2314  AGTTTTCAGGCCTCAGGATACAATTTCAACACCTATGACTGGAGGAGTCCAAAACAGAGAGGCAGCTTGTCCCC  2387
              |||||||.|.|||||||||||||.||||||||||||.||||||||||||||.||.|||..||||.|||||||
Sbjct 1244  --TTTTCAGACTTCAGGATACAATTACAACACCTATGATTGGAGGAGTCCAAAGCAAAGAACCAGCCTGTCCCC  1315

Query 2388  AGTCACTAAGCCTCGAAGCCAGACTTACCCAGATGTGGGGCTGAGTTATGAAGACTGGGACCGGTCCACAGCCA  2461
            ||||.|.|||||||||||||||||.||||||||||||||.||||||.|||||||||||||.||.||||||||||
Sbjct 1316  AGTCCCCAAGCCTCGAAGCCAGACGTACCCAGATGTGGGCCTGAGTAATGAAGACTGGGATCGATCCACAGCCA  1389

Query 2462  GTGGTTTTGCAGGGGCTGCCGATAGTGCAGAGACAGAACAAGAGGAGAACTTCTGGTCTCAAGCGCTGGAGGAT  2535
            ||||.||||.|||||||.|.||.||||||||..|.|||||||||||.|||||||||||||||||..|||||||.
Sbjct 1390  GTGGCTTTGTAGGGGCTTCTGACAGTGCAGATGCTGAACAAGAGGAAAACTTCTGGTCTCAAGCATTGGAGGAC  1463

Query 2536  TTGGAAACCTGCGGACAGTCAGGAATTCTGAGAGAACTGGAGGAGAAAGCTGACAGGCGTGTGTCTTTGAGAAA  2609
            .||||.||||||||.|||||.||.||.||||||||.||.||                                 
Sbjct 1464  CTGGAGACCTGCGGCCAGTCGGGGATCCTGAGAGAGCTTGA---------------------------------  1504

Query 2610  CATGACTCTCTTGGCAACAATCATGTCGGGGAGCACGATGAGTTTGAATCATGAGGCTCCAACACCTCGCAGTC  2683
                        |||||||||||||||||||||.||.|||||||||||||||||||||||||...|||||||||
Sbjct 1505  ------------GGCAACAATCATGTCGGGGAGTACTATGAGTTTGAATCATGAGGCTCCAATGGCTCGCAGTC  1566

Query 2684  AGCTGGGGCGACAGGCCAGCTTCCAGGAGCGCAGCAGCTCGCGGCCGCACTACAGCCAAACAACTCGGAGCAAC  2757
            ||||||||||||||||||||||||||||.||.|||||.||.|||||.|||||.||||||||||||||.||||||
Sbjct 1567  AGCTGGGGCGACAGGCCAGCTTCCAGGAACGGAGCAGTTCACGGCCACACTATAGCCAAACAACTCGCAGCAAC  1640

Query 2758  ACCCTGCCTTCAGATGTGGGTAGGAAGTCAGTAACCCTGAGAAAAATGAAACAAGAAATAAAGGAGATCATGTC  2831
            ||||||||.|||||.|||||.||.|||||.|||||||||.|.||||||||.|||||||||||||||||||||||
Sbjct 1641  ACCCTGCCCTCAGACGTGGGCAGAAAGTCTGTAACCCTGCGGAAAATGAAGCAAGAAATAAAGGAGATCATGTC  1714

Query 2832  TCCAACTCCTGTGGAGCTGCACAAGGTGACCTTGTACAAGGACTCTGACATGGAGGACTTTGGGTTCAGTGTAG  2905
            .||||||||.||||||||.||||||||||||||.|||||||||||||.||||||||||||.|||||||||||.|
Sbjct 1715  CCCAACTCCGGTGGAGCTACACAAGGTGACCTTATACAAGGACTCTGGCATGGAGGACTTCGGGTTCAGTGTGG  1788

Query 2906  CAGATGGCTTACTGGAGAAAGGAGTGTATGTCAAAAATATTCGCCCAGCTGGGCCAGGAGATCTTGGTGGCTTA  2979
            ||||||||.|.|||||||||||.|||||||||||||||||.|||||||||||||||||.|||.||||.|||||.
Sbjct 1789  CAGATGGCCTGCTGGAGAAAGGCGTGTATGTCAAAAATATCCGCCCAGCTGGGCCAGGTGATGTTGGGGGCTTG  1862

Query 2980  AAGCCCTATGACAGGCTCTTACAGGTGAATCATGTCCGAACCAGAGACTTTGACTGCTGCCTTGTTGTGCCCCT  3053
            ||||||||.|||||||||||||||||.|||||.||.||.||.||||||||||||||||||||.||.|||||.||
Sbjct 1863  AAGCCCTACGACAGGCTCTTACAGGTAAATCACGTGCGGACGAGAGACTTTGACTGCTGCCTGGTGGTGCCTCT  1936

Query 3054  CATAGCAGAATCCGGGAATAAGCTGGACCTGGTTATTAGTAGAAACCCACTGGCTTCACAGAAGTCTATAGACC  3127
            ||||||.|||||.||.||.||||||||||||||||||||.|||||.||||||||.||.||||||||.|||||.|
Sbjct 1937  CATAGCTGAATCTGGCAACAAGCTGGACCTGGTTATTAGCAGAAATCCACTGGCCTCCCAGAAGTCGATAGAAC  2010

Query 3128  AACAGAGTCTACCAGGAGATTGGAGTGAACAGAACAGTGCTTTTTTCCAGCAGCCTAGCCACGGTGGT-----A  3196
            |.|.|..|||.||..|.||.|||||.|||||||||||.|||||.||||||||.||.||||||||||.|     |
Sbjct 2011  AGCCGGCTCTGCCCAGCGACTGGAGCGAACAGAACAGCGCTTTCTTCCAGCAACCCAGCCACGGTGCTTCCCAA  2084

Query 3197  ATTTGG-AGACACGAG---------------AACCCACT---AATACATTA-----------------------  3228
            |   || ||||| |.|               ||.|||||   .|.|.||.|                       
Sbjct 2085  A---GGAAGACA-GCGCCTCGGCCAACCTGAAAACCACTCTGGAGAAATGAGAATGAGCTGCGGCATCAGATCT  2154

Query 3229  --------------------------------------------------------------------------  3228
                                                                                      
Sbjct 2155  GGGTTCGGCTGGAAGCTCCAGTACTCAGAATGTGGCGCAATTTCCCTCCGGGAAGCCAGCTTCCCCACCTGGGA  2228

Query 3229  --------------------------------------------------------------------------  3228
                                                                                      
Sbjct 2229  TCCTGAAGGGATTCCTGGAGATACTGTATACTTTTGGCAAAGCCTCTGAGAAAGAGCATCATCCCCTCCCATGA  2302

Query 3229  --------------------------------------------------------------------------  3228
                                                                                      
Sbjct 2303  ACAAACTCTGGGCTGATGTCACCGCGTGAGGATGAGAGGCAGCAGGCACATCGCAGTGCCCAATCTCACGCTTA  2376

Query 3229  --------------------------------------------------------------------------  3228
                                                                                      
Sbjct 2377  CGTTCACAGATCTGCAACGCAGGCCTTTGGTCCAAGCGGGAAGGCTCCAGCAGACTCGGGCCTGGGGCTGAGGA  2450

Query 3229  --------------------------------------------------------------------------  3228
                                                                                      
Sbjct 2451  ACACTGCCTTTTTCTCTTTGTGCCACCATGTAAAGTCATAGCCCCCCCCCCACCCCCCCAATGTCGGTGAGAAG  2524

Query 3229  ---------------------------------------  3228
                                                   
Sbjct 2525  AAATATAACTCAAGAAACTTGAAAAAAAAAAAAAAAAAA  2563

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