Nucleotide Global Alignment

Description

Query:
TRCN0000468758
Subject:
XM_017314126.1
Aligned Length:
3260
Identities:
2853
Gaps:
64

Alignment

Query    1  ATGATAGCTGTCTCTTTTAAATGCCGTTGTC----------AAAT-----TCTGAGGCGACTTACTAA------  53
                                ||||||  |.|          |.||     ||||      ||||| ||      
Sbjct    1  --------------------ATGCCG--GGCTGGAAGAAGAACATCCCCATCTG------CTTAC-AAGCGGAG  45

Query   54  -----------AGATGAGAGTCCCTACACTAAATCCGCCAGCCAGACAAAGCCGCCTGATGGAGCGTTGGCTGT  116
                       ||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||||||||
Sbjct   46  GAGCAGGAGAGAGATGAGAGTCCCTACACTAAATCTGCCAGCCAGACAAAGCCGCCCGATGGAGCATTGGCTGT  119

Query  117  GAGGAGACAGAGCATCCCAGAGGAATTCAAGGGCTCCACAGTCGTCGAGCTGATGAAGAAGGAAGGCACTACCC  190
            ||||||||||||||||||||||||||||||||||||||||||.||.|||.|||||||||||||.||.||.||.|
Sbjct  120  GAGGAGACAGAGCATCCCAGAGGAATTCAAGGGCTCCACAGTGGTGGAGTTGATGAAGAAGGAGGGAACCACTC  193

Query  191  TGGGTCTGACGGTATCGGGAGGAATTGATAAGGATGGCAAGCCAAGAGTATCTAATCTGCGGCAAGGAGGAATT  264
            |.||.|||||||||||||||||.||||||||.|||||||||||||||||.||.||.||||||||.||||||||.
Sbjct  194  TTGGCCTGACGGTATCGGGAGGCATTGATAAAGATGGCAAGCCAAGAGTGTCCAACCTGCGGCAGGGAGGAATC  267

Query  265  GCTGCTAGAAGTGACCAGCTGGATGTGGGTGACTACATCAAAGCAGTGAATGGAATCAACCTGGCCAAATTCCG  338
            |||||.|||||||||||||||||||||||.|||||||||||.||.||||||||.||||||||||||||.|||||
Sbjct  268  GCTGCCAGAAGTGACCAGCTGGATGTGGGCGACTACATCAAGGCGGTGAATGGGATCAACCTGGCCAAGTTCCG  341

Query  339  CCATGACGAGATCATCAGCTTGCTGAAGAATGTGGGAGAAAGAGTGGTTCTTGAAGTAGAGTACGAGCTTCCAC  412
            |||.||.||||||||||||.|||||||.|||||.||.|||||||||||.||.||.||.||||||||||||||||
Sbjct  342  CCACGATGAGATCATCAGCCTGCTGAAAAATGTCGGGGAAAGAGTGGTCCTGGAGGTCGAGTACGAGCTTCCAC  415

Query  413  CGGTCTCTGTGCAAGGATCAAGTGTTATTTTCCGAACAGTGGAGGTCACATTACATAAAGAAGGCAATACCTTT  486
            ||||||||||.||||||||.||||||||.||||||||.|||||||||||..|.||.|||||||||||.||||||
Sbjct  416  CGGTCTCTGTACAAGGATCCAGTGTTATGTTCCGAACTGTGGAGGTCACGCTGCACAAAGAAGGCAACACCTTT  489

Query  487  GGTTTTGTAATTCGAGGGGGAGCACATGATGATAGAAATAAATCTCGTCCAGTTGTGATAACATGTGTTCGTCC  560
            ||||||||.||.|||||||||||.||||||||.||.||.||.||.|||||.|||||||||||.|||||||||||
Sbjct  490  GGTTTTGTCATCCGAGGGGGAGCGCATGATGACAGGAACAAGTCCCGTCCGGTTGTGATAACCTGTGTTCGTCC  563

Query  561  TGGAGGGCCTGCTGACAGAGAGGGCACGATCAAACCCGGTGACAGGTTGCTCAGTGTGGATGGAATTCGGCTTC  634
            |||||||||||||||||||||||||||.||||||||.||.||||||||||||||.|||||||||||||||||.|
Sbjct  564  TGGAGGGCCTGCTGACAGAGAGGGCACCATCAAACCTGGAGACAGGTTGCTCAGCGTGGATGGAATTCGGCTCC  637

Query  635  TTGGAACTACGCATGCTGAAGCCATGAGTATTCTTAAACAATGTGGACAAGAAGCAGCACTGCTGATAGAATAT  708
            |.|||||.||.|||||.||.||||||||.||.||||||||.||.|||||||||||..|.||||||||||||||.
Sbjct  638  TGGGAACCACCCATGCCGAGGCCATGAGCATCCTTAAACAGTGCGGACAAGAAGCCACGCTGCTGATAGAATAC  711

Query  709  GATGTCTCAGTAATGGACTCTGTGGCAACAGCATCCGGGCCACTACTAGTCGAAGTTGCCAAAACTCCTGGTGC  782
            ||||||||.||.|||||.||||||||.|||||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct  712  GATGTCTCTGTGATGGATTCTGTGGCGACAGCATCCGGGCCACTACTAGTTGAAGTTGCCAAAACTCCAGGTGC  785

Query  783  CAGCCTTGGGGTTGCCCTAACTACCTCGATGTGCTGTAACAAACAAGTCATTGTCATAGACAAAATCAAATCTG  856
            |||||||||||||||||||||||||||..|||||||||||||.||.||||||||||||||||||||||||||||
Sbjct  786  CAGCCTTGGGGTTGCCCTAACTACCTCCGTGTGCTGTAACAAGCAGGTCATTGTCATAGACAAAATCAAATCTG  859

Query  857  CAAGTATTGCAGACAGATGTGGCGCATTGCATGTGGGAGATCACATCCTCTCCATCGATGGAACCAGCATGGAG  930
            ||||.|||||.||||||||||||||..|.||.||||||||.||||||||||||||.||.||.||.||.||||||
Sbjct  860  CAAGCATTGCGGACAGATGTGGCGCGCTACACGTGGGAGACCACATCCTCTCCATTGACGGCACGAGTATGGAG  933

Query  931  TACTGTACACTTGCAGAAGCAACCCAGTTCCTGGCCAACACCACTGACCAGGTCAAGCTTGAGATCCTTCCCCA  1004
            ||||||||.||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||.||
Sbjct  934  TACTGTACCCTCGCAGAAGCGACCCAGTTCCTGGCCAATACCACTGACCAGGTCAAGCTGGAGATTCTCCCACA  1007

Query 1005  TCATCAGACCCGGCTGGCCCTAAAGGGGCCCGACCATGCAGCTTTGGTGTCTTCATCCTTCTCTCCTACCTCCA  1078
            .|||||||||||.||||||||||||||.||.||||||||.|||.|||||.|.|||||   .|||||||||||||
Sbjct 1008  CCATCAGACCCGCCTGGCCCTAAAGGGCCCTGACCATGCGGCTATGGTGCCCTCATC---TTCTCCTACCTCCA  1078

Query 1079  TGAGTGCATACAGCCTGAGTTCCCTGAACATGGGGACTCTACCTCGAAGCCTCTACTCCACCAGCCCACGTGGA  1152
            |||||||.|||||.||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.|||
Sbjct 1079  TGAGTGCGTACAGTCTGAGTTCCCTGAACATGGGGACTTTACCTCGAAGCCTCTACTCCACCAGCCCACGAGGA  1152

Query 1153  ACCATGATGAGGAGGAGACTGAAAAAGAAAGACTTCAAAAGCTCATTGTCCTTAGCCTCCAGCACAGTAGGATT  1226
            |||||||||||||||||||||||||||||||||||||||||||||.||||.||||||||||||||.||.||.||
Sbjct 1153  ACCATGATGAGGAGGAGACTGAAAAAGAAAGACTTCAAAAGCTCACTGTCTTTAGCCTCCAGCACTGTGGGGTT  1226

Query 1227  GGCTGGGCAGGTTGTTCACACAGAAACCACAGAGGTTGTGCTGACGGCAGATCCTGTCACAGGATTTGGGATCC  1300
            ||||||.|||||.||||||||.||||||||||||||||||||||||||.||.||||||||.||.||.||.||||
Sbjct 1227  GGCTGGCCAGGTCGTTCACACTGAAACCACAGAGGTTGTGCTGACGGCTGACCCTGTCACGGGCTTCGGAATCC  1300

Query 1301  AACTGCAGGGCAGTGTGTTTGCCACAGAAACTCTCTCTTCTCCACCTCTGATTTCCTATATCGAAGCTGACAGC  1374
            |||||||||||||.||||||||||||||.||.|||||.|||||.|||||||||||||||||.||||||||||||
Sbjct 1301  AACTGCAGGGCAGCGTGTTTGCCACAGAGACGCTCTCCTCTCCGCCTCTGATTTCCTATATTGAAGCTGACAGC  1374

Query 1375  CCAGCAGAGAGATGTGGGGTGCTACAGATTGGAGACAGAGTGATGGCCATCAATGGAATTCCAACAGAAGACAG  1448
            |||||||||||||||||.|||||||||||||||||||||||.||||||||.||||||||.||||||||||||||
Sbjct 1375  CCAGCAGAGAGATGTGGTGTGCTACAGATTGGAGACAGAGTCATGGCCATTAATGGAATCCCAACAGAAGACAG  1448

Query 1449  CACCTTCGAAGAAGCCAGTCAGCTCCTCCGAGACTCTTCAATCACGAGCAAGGTCACACTGGAAATCGAGTTTG  1522
            |||||||||.|||||||.|||.|||||..||||||||||.|||||||||||.||||||||.|||||||||||||
Sbjct 1449  CACCTTCGAGGAAGCCAATCAACTCCTGAGAGACTCTTCCATCACGAGCAAAGTCACACTAGAAATCGAGTTTG  1522

Query 1523  ATGTTGCAGAGTCTGTCATCCCAAGTAGTGGAACATTTCATGTAAAGCTGCCTAAGAAGCACAATGTGGAACTT  1596
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||..|||||||||
Sbjct 1523  ATGTTGCAGAGTCTGTCATCCCAAGTAGTGGAACATTTCATGTAAAACTGCCCAAGAAGCACAGCGTGGAACTT  1596

Query 1597  GGAATAACCATAAGTTCACCATCCAGTAGAAAACCAGGAGACCCCCTCGTCATTTCAGATATCAAGAAAGGGAG  1670
            |||||||||||.|||||.|||||||||||||||||.||.||||||||.|||||||||||||||||||||||.||
Sbjct 1597  GGAATAACCATCAGTTCGCCATCCAGTAGAAAACCGGGGGACCCCCTTGTCATTTCAGATATCAAGAAAGGCAG  1670

Query 1671  TGTGGCACACAGAACTGGGACCCTGGAACTTGGGGATAAATTGCTCGCAATAGATAATATCCGGCTGGACAACT  1744
            |||||||||||||||.||.||.||||||||.||.||.|||.||||.||.||||||||.|||||||||||.||||
Sbjct 1671  TGTGGCACACAGAACCGGAACTCTGGAACTGGGAGACAAACTGCTTGCGATAGATAACATCCGGCTGGATAACT  1744

Query 1745  GTTCCATGGAAGATGCAGTTCAGATCCTCCAGCAATGTGAAGACCTGGTGAAGCTCAAAATCCGCAAAGATGAA  1818
            ||||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1745  GTTCCATGGAAGATGCGGTCCAGATCCTCCAGCAGTGTGAAGACCTGGTGAAGCTCAAAATCCGCAAAGATGAA  1818

Query 1819  GATAATTCAGATGAGCAAGAAAGTTCCGGAGCAATTATTTACACCGTGGAGCTTAAACGCTACGGGGGGCCCCT  1892
            |||||.|||||.||||||||.|||||||||||.|||||||||||.||||||||.||.|||||.|||||||||||
Sbjct 1819  GATAACTCAGACGAGCAAGAGAGTTCCGGAGCGATTATTTACACGGTGGAGCTGAAGCGCTATGGGGGGCCCCT  1892

Query 1893  TGGCATCACAATTTCAGGAACTGAAGAGCCGTTTGATCCTATAATCATTTCAAGCCTCACTAAAGGGGGATTAG  1966
            |||||||||||||||.||||||||||||||||||||||||||.|||||.||.||||||||||||||||||||||
Sbjct 1893  TGGCATCACAATTTCTGGAACTGAAGAGCCGTTTGATCCTATTATCATCTCGAGCCTCACTAAAGGGGGATTAG  1966

Query 1967  CTGAAAGAACTGGCGCAATCCACATAGGAGACCGAATCCTAGCCATCAATAGCAGCAGCTTGAAAGGGAAGCCT  2040
            |||||||.|||||.||.||||||||.|||||..|||||||||||||||||||||||||||||||.|||||||||
Sbjct 1967  CTGAAAGGACTGGAGCGATCCACATCGGAGATAGAATCCTAGCCATCAATAGCAGCAGCTTGAAGGGGAAGCCT  2040

Query 2041  CTGAGTGAAGCCATCCATTTGTTACAGATGGCAGGAGAGACTGTCACCTTGAAAATTAAGAAACAGACAGATGC  2114
            |||||||||||||||||.|||.|.||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 2041  CTGAGTGAAGCCATCCACTTGCTCCAGATGGCAGGAGAGACTGTCACCCTGAAAATTAAGAAACAGACAGATGC  2114

Query 2115  CCAGTCAGCATCGAGCCCCAAGAAGTTCCCTATTTCTAGCCATTTGAGTGACCTGGGGGATGTGGAGGAGGACT  2188
            |||.||.|||||.||.||||||||||||||.||..||.||||.|.|.|.|||||.||.||||..|||||||||.
Sbjct 2115  CCAATCTGCATCAAGTCCCAAGAAGTTCCCCATCCCTGGCCACTCGGGGGACCTAGGAGATGGTGAGGAGGACC  2188

Query 2189  CCTCACCAGCACAGAAGCCAGGCAAGCTCTCCGACATGTACCCCTCCACGGTGCCCAGTGTGGACAGTGCTGTG  2262
            ||||.|||..||||||.||.||||||||||||||...|||||||||||||||||||||.|||||||||||||||
Sbjct 2189  CCTCCCCAATACAGAAACCTGGCAAGCTCTCCGATGCGTACCCCTCCACGGTGCCCAGCGTGGACAGTGCTGTG  2262

Query 2263  GATTCATGGGATGGGTCTGCAATAGACACCAGCTATGGAACTGAAGGCACTAGTTTTCAGGCCTCAGGATACAA  2336
            ||.||.|||||||||||||.||||||..||||||||||.|.|.|||||.|.|.|||||||.|.|||||||||||
Sbjct 2263  GACTCCTGGGATGGGTCTGGAATAGATGCCAGCTATGGGAGTCAAGGCTCAACTTTTCAGACTTCAGGATACAA  2336

Query 2337  TTTCAACACCTATGACTGGAGGAGTCCAAAACAGAGAGGCAGCTTGTCCCCAGTCACTAAGCCTCGAAGCCAGA  2410
            ||.||||||||||||.||||||||||||||.||.|||..||||.|||||||||||.|.||||||||||||||||
Sbjct 2337  TTACAACACCTATGATTGGAGGAGTCCAAAGCAAAGAACCAGCCTGTCCCCAGTCCCCAAGCCTCGAAGCCAGA  2410

Query 2411  CTTACCCAGATGTGGGGCTGAGTTATGAAGACTGGGACCGGTCCACAGCCAGTGGTTTTGCAGGGGCTGCCGAT  2484
            |.||||||||||||||.||||||.|||||||||||||.||.||||||||||||||.||||.|||||||.|.||.
Sbjct 2411  CGTACCCAGATGTGGGCCTGAGTAATGAAGACTGGGATCGATCCACAGCCAGTGGCTTTGTAGGGGCTTCTGAC  2484

Query 2485  AGTGCAGAGACAGAACAAGAGGAGAACTTCTGGTCTCAAGCGCTGGAGGATTTGGAAACCTGCGGACAGTCAGG  2558
            ||||||||..|.|||||||||||.|||||||||||||||||..|||||||..||||.||||||||.|||||.||
Sbjct 2485  AGTGCAGATGCTGAACAAGAGGAAAACTTCTGGTCTCAAGCATTGGAGGACCTGGAGACCTGCGGCCAGTCGGG  2558

Query 2559  AATTCTGAGAGAACTGGAGGAGAAAGCTGACAGGCGTGTGTCTTTGAGAAACATGACTCTCTTGGCAACAATCA  2632
            .||.||||||||.||.||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||
Sbjct 2559  GATCCTGAGAGAGCTTGAGGAGAAAGCTGACAGGCGTGTGTCATTGAGAAACATGACCCTCTTGGCAACAATCA  2632

Query 2633  TGTCGGGGAGCACGATGAGTTTGAATCATGAGGCTCCAACACCTCGCAGTCAGCTGGGGCGACAGGCCAGCTTC  2706
            ||||||||||.||.|||||||||||||||||||||||||...||||||||||||||||||||||||||||||||
Sbjct 2633  TGTCGGGGAGTACTATGAGTTTGAATCATGAGGCTCCAATGGCTCGCAGTCAGCTGGGGCGACAGGCCAGCTTC  2706

Query 2707  CAGGAGCGCAGCAGCTCGCGGCCGCACTACAGCCAAACAACTCGGAGCAACACCCTGCCTTCAGATGTGGGTAG  2780
            |||||.||.|||||.||.|||||.|||||.||||||||||||||.||||||||||||||.|||||.|||||.||
Sbjct 2707  CAGGAACGGAGCAGTTCACGGCCACACTATAGCCAAACAACTCGCAGCAACACCCTGCCCTCAGACGTGGGCAG  2780

Query 2781  GAAGTCAGTAACCCTGAGAAAAATGAAACAAGAAATAAAGGAGATCATGTCTCCAACTCCTGTGGAGCTGCACA  2854
            .|||||.|||||||||.|.||||||||.|||||||||||||||||||||||.||||||||.||||||||.||||
Sbjct 2781  AAAGTCTGTAACCCTGCGGAAAATGAAGCAAGAAATAAAGGAGATCATGTCCCCAACTCCGGTGGAGCTACACA  2854

Query 2855  AGGTGACCTTGTACAAGGACTCTGACATGGAGGACTTTGGGTTCAGTGTAGCAGATGGCTTACTGGAGAAAGGA  2928
            ||||||||||.|||||||||||||.||||||||||||.|||||||||||.|||||||||.|.|||||||||||.
Sbjct 2855  AGGTGACCTTATACAAGGACTCTGGCATGGAGGACTTCGGGTTCAGTGTGGCAGATGGCCTGCTGGAGAAAGGC  2928

Query 2929  GTGTATGTCAAAAATATTCGCCCAGCTGGGCCAGGAGATCTTGGTGGCTTAAAGCCCTATGACAGGCTCTTACA  3002
            |||||||||||||||||.|||||||||||||||||.|||.||||.|||||.||||||||.||||||||||||||
Sbjct 2929  GTGTATGTCAAAAATATCCGCCCAGCTGGGCCAGGTGATGTTGGGGGCTTGAAGCCCTACGACAGGCTCTTACA  3002

Query 3003  GGTGAATCATGTCCGAACCAGAGACTTTGACTGCTGCCTTGTTGTGCCCCTCATAGCAGAATCCGGGAATAAGC  3076
            |||.|||||.||.||.||.||||||||||||||||||||.||.|||||.||||||||.|||||.||.||.||||
Sbjct 3003  GGTAAATCACGTGCGGACGAGAGACTTTGACTGCTGCCTGGTGGTGCCTCTCATAGCTGAATCTGGCAACAAGC  3076

Query 3077  TGGACCTGGTTATTAGTAGAAACCCACTGGCTTCACAGAAGTCTATAGACCAACAGAGTCTACCAGGAGATTGG  3150
            ||||||||||||||||.|||||.||||||||.||.||||||||.|||||.||.|.|..|||.||..|.||.|||
Sbjct 3077  TGGACCTGGTTATTAGCAGAAATCCACTGGCCTCCCAGAAGTCGATAGAACAGCCGGCTCTGCCCAGCGACTGG  3150

Query 3151  AGTGAACAGAACAGTGCTTTTTTCCAGCAGCCTAGCCACGGTGGTAATTTGGAGACACGAGAACCCACTAATAC  3224
            ||.|||||||||||.|||||.||||||||.||.|||||||||||||||.|.||||||||||||||||||||.||
Sbjct 3151  AGCGAACAGAACAGCGCTTTCTTCCAGCAACCCAGCCACGGTGGTAATCTAGAGACACGAGAACCCACTAACAC  3224

Query 3225  ATTA  3228
            |.||
Sbjct 3225  ACTA  3228

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