Nucleotide Global Alignment
Description
- Query:
- TRCN0000468764
- Subject:
- XM_006511574.3
- Aligned Length:
- 2863
- Identities:
- 858
- Gaps:
- 1871
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTCCAAGTTTAAAAGAACTCTATATTTTGTCTAACAGACGTATAGGAGAAAATTTGAGTGTCTCAGCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTGTAGAAAATGAGCCTGCAGTTAGTTCAGCAACTCAAGCAAAGGAAAAAGTTGGGATGATTCTCCTTCCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCACGAGTTCCTTATCCTCGTTTCTCTCGGTTCTCACAGAGGGAGCAGAGAACTTATGTGGATTTGTTGGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATATGCAAAGCTCCCCTCAAGTTCCAAGACTGTCGGAACAAATACCAATGAATATCTGCAGTATCTGGATAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAAAAACATGTGAATGAAGAAGTTAATGAATTTCTAAAGTTTTTACAAAATTCTGCAAAGAAATGTGCACAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTATAATATGCTCTCTGATGAGGCCCGACTCTTCACGGAGCAACTCCTAAGAGCTTGCATTGAACAAGTGAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGTACCCAGAATTTTATACTCTTCATGAAGTTACCAGCCTAATGGGATTCTTCCCCTTCAAAACAGAGATGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTGAAGTTGGAAAAGACTCTTCTTGTTTTGGGCAGTGCAAAGTTTGTAAAAACAGCATTTCCCTCAATGCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAATTACAGCTCTCAAAAGAGGACATGTCTTCCATTGAGACCCCACAACAAAAAGCTGAAGTTATGCACTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATATTAGTAAAGACCCGAACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAGATAGCTCTGACTAGCCAAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATTATTCACCTTGCTCAATAACCATGGACCAAGCTACAAGGAGCAGTGGGAAATTCCAGTGTGTGTTGAGATGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGCTGTGGAAGGTTCCAAACCAGTTAAAGTAATTTATATCAATTCTCCACTTCCTCGAAAGCAAATGACAATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAGAAAGAAATCAAATCTTCCATGAAGTTCCATTAAAACATATAATATCAAAAAACACATCTGTTCCAGTCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCTGTCTTTATGGACAAACCTGAAGAGTACACCTCTGAGGTGGACATGCCCACTGAAGCTGGTGAGTGCCGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAATTGAAACTCTGGAAAATTTGGATATGGACTTCGATGGTGATGTCACAGAACTTGAAACCTTTGGAGTAACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTACTAGTCCACCTAGGTCACCAAGTTCAGAAAGTGACTCCTCTGCACCCCTCATGACAGATGTCCACGCAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTGTGGCACCCACTATGCCTGTGGCACCAGCTACAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGTCACACCCACTATGCCCATGGCACCAGCTACACCTGAGGCATCAGCTACACCTAACATTACTGATGATTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGAAGTTTATGTCAGATTCTGATGAAACAATTACAGAAGGAGAAACAGCTATTCTCTGGTGTGGAAGGTGGTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGAAGGGTGCAAAAATAAAGATGATCAAGGACTTGAACCATGTGGTGAAGAGGTCCCCAGTGCCAATGCAAAAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTCTAACACAAGATAATGAAGTCCACAGAACTGAGGGAATTTCTAAGGAAAGTGATGTAGGTGTGCTGTGTACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AATGATGAAAGACAGGGTGGTCAGGGGAATGCAAACAATCCCAACAACACAGCTACTGCATCAGAAGCAGCTGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGTGAGAAAGGGATTCCTTGTGGCAGTGATACAGATGAGGACTGCTTAATCATTGATACAGAGAGTAGAAGTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGATGGGAAGACAGCTGATTTAGGTTCTAGGCCAAATTCTTCAGCACAGGCTTCTGCAGGGAATCAGGCCACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCACTGTTTCTGAGGAATCTTGTGTTTTAAAGAAACCTATCAAAAGAGTCTACAAAAAATTTGATCCAGTTGG 1850
Query 1 -------------ATGCAGGATGAGCTCTTAAAGCCAATTTCCAGAAAAGTACCAGAATTGCCCTTAATGAATT 61
||||||||||||||.|||||.|||.|||||||.||||||||.||.||||||||.|..||||
Sbjct 1851 AGAAATTCTAAAAATGCAGGATGAGCTTTTAAAACCAGTTTCCAGGAAAGTACCTGAGTTGCCCTTGACTAATT 1924
Query 62 TAGAAAATTCTAAACAGCCTTCTGTTTCTGAGCAATTGTCTGGTCCTTCAGACTCCTCTAGTTGGCCGAAATCT 135
.||||.|.|||||||||||..|||.||||||||||...||||.|.|||..||..||.||...|||||.|||||.
Sbjct 1925 CAGAAGAATCTAAACAGCCGCCTGCTTCTGAGCAACCCTCTGCTGCTTTGGATGCCGCTCCCTGGCCAAAATCC 1998
Query 136 GGATGGCCTTCTGCATTTCAGAAGCCAAAAGGACGATTGCCATATGAACTTCAGGACTATGTTGAAGATACATC 209
.|.|||||.|||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||||||||
Sbjct 1999 AGTTGGCCCTCTGCATTTCAGAAGCCTAAAGGACGATTGCCATATGAACTTCAAGACTATGTGGAAGATACATC 2072
Query 210 GGAATACCTAGCTCCTCAGGAAGGAAATTTTGTTTATAAGTTATTTAGCCTGCAAGACCTGTTGTTACTCGTAC 283
.|||||..||||||||||.||||||||.|||||.||.|||||.||.|||||.|||||||||||||||||.||.|
Sbjct 2073 AGAATATATAGCTCCTCAAGAAGGAAACTTTGTCTACAAGTTGTTCAGCCTACAAGACCTGTTGTTACTTGTGC 2146
Query 284 GCTGCAGTGTCCAGAGGATAGAGACAAGACCACGTTCTAAAAAACGGAAGAAAATCAGAAGACAATTTCCAGTT 357
|.|||||..||||||||.||||.||.||||||||.||.||||||||||||||.|||||||||||||||||||||
Sbjct 2147 GGTGCAGCATCCAGAGGGTAGAAACGAGACCACGCTCCAAAAAACGGAAGAAGATCAGAAGACAATTTCCAGTT 2220
Query 358 TATGTACTACCAAAAGTAGAGTATCAAGCTTGTTACGGAGTTGAAGCTCTGACTGAAAGTGAACTTTGTCGCTT 431
||.||.||||||||||||||||||||||.||||||.|||||||||||||||||||||||.||.||.||||||||
Sbjct 2221 TACGTGCTACCAAAAGTAGAGTATCAAGGTTGTTATGGAGTTGAAGCTCTGACTGAAAGCGAGCTCTGTCGCTT 2294
Query 432 ATGGACTGAAAGTTTATTGCATTCCAACAGCTCATTTTATGTTGGGCATATCGATGCATTTACTTCAAAACTTT 505
.|||||||||||||||||||||||||||.||||.|||||||||||||||||.|||||||||||||||||.||||
Sbjct 2295 CTGGACTGAAAGTTTATTGCATTCCAACTGCTCGTTTTATGTTGGGCATATTGATGCATTTACTTCAAAGCTTT 2368
Query 506 TTCTACTGGAAGAAATTACCTCAGAAGAATTAAAAGAAAAGCTTTCAGCACTCAAGATTTCCAATTTATTTAAC 579
|..|.||.||||||||..|.||||||||||||||||||||.|||.||||||||||||||||.|..|||||||||
Sbjct 2369 TCATGCTAGAAGAAATCGCTTCAGAAGAATTAAAAGAAAAACTTGCAGCACTCAAGATTTCAAGCTTATTTAAC 2442
Query 580 ATCCTCCAACACATTCTAAAGAAACTAAGTAGCTTGCAGGAGGGTTCCTACTTGTTATCTCATGCAGCAGAAGA 653
||.|||||.|||||||||||||||.||.|||||||||||||.||.|||||||||.|.|||||||||||||||||
Sbjct 2443 ATTCTCCAGCACATTCTAAAGAAATTATGTAGCTTGCAGGAAGGGTCCTACTTGCTGTCTCATGCAGCAGAAGA 2516
Query 654 TTCTTCACTCCTGATTTATAAGGCCTCTGATGGAAAAGTTACTAGGACAGCATACAATTTGTATAAAACACATT 727
|||||||||||||||.||.|||.||||.|||||||||||||||||.||.|||||.||||||.||||..||||||
Sbjct 2517 TTCTTCACTCCTGATCTACAAGACCTCAGATGGAAAAGTTACTAGAACGGCATATAATTTGCATAAGGCACATT 2590
Query 728 GCGGCCTTCCTGGTGTACCTTCCAGTCTCTCAGTTCCCTGGGTCCCATTAGATCCCAG---CCTGTTATTACCA 798
|.|.|||||||||.|||||.|||||||||||.|||||.|||||||||||||||||||| |||| ||||||
Sbjct 2591 GTGACCTTCCTGGCGTACCCTCCAGTCTCTCGGTTCCTTGGGTCCCATTAGATCCCAGTTACCTG---TTACCA 2661
Query 799 TATCATATCCATCATGGAAGAATACCTTGTACTTTTCCACCGAAATCACTGGATACCACAACACAACAAAAGAT 872
||||||||||||||||||.||.|||||||.|||||||||||.|||.|||||....|..||.|||||..||||.|
Sbjct 2662 TATCATATCCATCATGGACGAGTACCTTGCACTTTTCCACCTAAACCACTGCGCCCTGCAGCACAAGCAAAGGT 2735
Query 873 TGGTGGAACGAGAATGCCTACACGCAGCCACAGGAATCCAGTTTCCATGGAAACCAAAAGCAGTTGCTTGCCTG 946
||||||.||.|||||||||||.||.|.||||||||||||.||.||||||||||||||||||||||||.||||||
Sbjct 2736 TGGTGGGACAAGAATGCCTACCCGTAACCACAGGAATCCTGTCTCCATGGAAACCAAAAGCAGTTGCCTGCCTG 2809
Query 947 CTCAGCAAGTTGAAACTGAAGGAGTGGCTCCACATAAAAGAAAAATAACT- 996
.||||||||||||||.||||||||||||||...|||||||.||||||| |
Sbjct 2810 TTCAGCAAGTTGAAAATGAAGGAGTGGCTCGGAATAAAAGGAAAATAA-TG 2859
