Nucleotide Global Alignment
Description
- Query:
- TRCN0000468959
- Subject:
- NR_028143.1
- Aligned Length:
- 2889
- Identities:
- 247
- Gaps:
- 2616
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTAGACTGCCTACCAGCGCAGCCTGAGCCGCTGAGTGCCGGTCAGCGGGCGCCGAGAATTGGACCAAATGG 74
Query 1 ------------------------------------------------------ATGGCGTCCGAACTTTGTAA 20
|||||.||||||.|.|||||
Sbjct 75 ACCAGTTTTGACAAGATGTAGTGCGACAGCACTTCCGGTTGGACATGTTCAGTCATGGCATCCGAAATCTGTAA 148
Query 21 GACGATCTCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCAT 94
|||||||||||||||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||.
Sbjct 149 GACGATCTCTGTGGCCAGGCTTGAAAAGCACAAGAATTTGTTCTTAAATTACAGGAATCTGCACCATTTTCCAC 222
Query 95 TGGAGTTACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG 168
|||||||.|||||.||||||||.||||||.||.|||||||.|||||||||||||||||||||||.|||.|||||
Sbjct 223 TGGAGTTGCTGAAGGATGAGGGGCTGCAGCACCTGGAGAGGCTCTATATGAAAAGGAACTCCCTCACAACCTTG 296
Query 169 CCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTG-----------AAGACAACTGTTAGTTTTGTG 231
|||||||||||||||||||||||||||||||||||||||||| || |.||| .||| |||||
Sbjct 297 CCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTACCTTCACTCAA-ATAAC--ATAG--TTGTG 365
Query 232 GCTTACTG-------CTGCTCC--------AC-CCAGTGTCTG-----CAG-----------------ACTTTT 267
| ||.|.| |.|.||| || |||||||||| ||| .|.|||
Sbjct 366 G-TTCCAGAAGCCATCGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGCCTTAGAGATCGTTT 438
Query 268 GACCTG-----------CTGAGT--------------------------------------------------- 279
|.||.| |||||.
Sbjct 439 GCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATAACCAGCTACAGTTCCTACCTCCA 512
Query 280 -------------------------------------------------------------------------- 279
Sbjct 513 GTACCTCACTGTGGACCGCAATCGGCTATGCTGTGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGC 586
Query 280 -------------------------------------------------------------------------- 279
Sbjct 587 TCTCCATGGCTGGAAACCATCTTGCATCTTTGCCCATTGATTTAGGTCGCTCCCGAGAACTGCAGTACGTGTAT 660
Query 280 -------------------------------------------------------------------------- 279
Sbjct 661 GTGGATAACAACATCCAGCTGAAGGGCCTGCCCTCATACCTCTACAACAAAGTCATCGGCTGCAACGGCTGTGG 734
Query 280 -------------------------------------------------------------------------- 279
Sbjct 735 CATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATTTTCATCTGGGCAGCTGACAGTCTTCCTCCCAGCAG 808
Query 280 -------------------------------------------------------------------------- 279
Sbjct 809 AGGTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGCCTCTGCAAGAACTGACCATGCGGAGTCTCTACCGC 882
Query 280 -------------------------------------------------------------------------- 279
Sbjct 883 ACCTACCACGGGCTTTGGAAAGATCTGAACTTTTTGTCTCCAATCTCATTACCCAGAAGTCTCCTGGAGCTGCT 956
Query 280 -------------------------------------------------------------------------- 279
Sbjct 957 GCACTGCCCCCTGGGGCACTGTCACCTGTGTAGTGAGCCCATGTTTACCTTCGTCTATCCTAAGATCTTCCCCT 1030
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1031 TGAGAGAGACGCCGATGGCAGGCCTGCACCAGAGGAGGACAAGTATTGGCTTCGTGGCTTACTGCTGCTCCACC 1104
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1105 CAGTGTCTGCGGACTTTTAACCTGCTGTGTTGATAAACACTCGAGAGCCTTAGGAGCACTGCCAGCTCAGCCAC 1178
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1179 TGCGACTGCCTTCCATCGCCAGTGTGTGCGGCCAGGCCAGGAGAGTCCAGCCAGGCAGGACAGACCCTTCCATC 1252
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1253 CTGCCTGCCCTGTCCTGAGGAGGGCCGTGCTGAACTCTGGGAATGTCCTGATTGGGCTTCACAACTAAAAGGCC 1326
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1327 TTCGCTTTTCCCTCAAGTCGGAATACATCCTCCCCCAAATGAAGGACGTGTTGTCTTCTGTGTTTTTCTTTGTA 1400
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1401 TGTGAGTGTGTCTCATATATAAACTTAGTCAAATGAGCTTCCCCACATCTAATTTAAAGCGAGCTGCAGTTCCC 1474
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1475 TGAAGAACTCTTAATTTGATAATAGAACCAAATTAACTGTTGGATGACATACGTTTGGTGATGATCCTGCCTTC 1548
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1549 CCCCAGAGGATGATTTCCCCTGGAGATTATTCTTAGGAGCTTCTCCATTGGAAACTTGTCACTTTCTAGAGTCT 1622
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1623 CTGCAACGCCTATGGCCTCAGCAGCCAGCATAGCAGGGCAGGGTGCCCGGGCTGGAGCAGCTAGGCTCCTGCAG 1696
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1697 AGGCACAGCTGGCTCCAGAGCACACGCCCTCTGGAAACTTCCTGTCTTATTTCTAAGTTTTGCAACCTAGGAAG 1770
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1771 ACATTTTTTGAGAGGGATTTAAAAACAAAAATGTAGACACAAATTAAATATACTTTTGTTCTAAACTACTATAG 1844
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1845 AAAAAGAAGTTTTGAATTTTTTTTTTTTTTTTTTTGCTAAGATTTTCCTATAATTGGGAAGTTTGAGGCATCTG 1918
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1919 ATGCTCTGCTGTGGATGGGGCTTAGTGGTATTTACCCGGTACATGAAATTGCCTTCATTTTCCTCTGACTTCTC 1992
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1993 CCTAGGGAAACAGAAGGAATGAACGGGTCCACATCCCACCTTTGCAAAAATCCCATGAGCTTTCCCTTGCCAGA 2066
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2067 GAGATGAGCTCTCTGGGGGGACAGCTGATTGGCTCTTCCTCTGAAAGGATGCCACCATAATCTGTTTTACTTTC 2140
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2141 AGGTGTTCGTTGGGCTGCTTTGGGGGGGGGGTAAAAGTTCTCTGTTTACTGGTATGATTTATGTAAGACAAGAC 2214
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2215 TGAAAGGGGAATCAAGAAGGCTTGCTTGGTGGGAAAGCTATTTCCCAAAACTTTGGTTGGTGACATTTTGTTAG 2288
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2289 CCAGCCTGACTGTAATTCTAGGCTCTAACAGTGCCAAAAATCCTACATAGTTACTGACAAGTGTGTGATCTCTT 2362
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2363 TGCAGTCACACCACCTGCTGCCTGAAAAGCAGACTCTTCCAAGTAATGGCAGAGGCAGAAAGCGGCCATGCATG 2436
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2437 CCATGTGTGGCCACTGTCCCTACTTCCTCCCGTCCCTTTCACAACTTGCTCTGTTCAGCCTTAATATTTCAAAG 2510
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2511 GCCTACAGTATAATAGGAGCTGAGCGTCTGGATCAAGTGTATCTCTTCTTTCATCCTTTCGGAAGAATGGAAGT 2584
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2585 TTCAGCACAACCCCGACATGTATATAAGCTGAAGGCAGGAAAATGTGGCCTGACACTTCACATCCGTGCTTGAC 2658
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2659 TTAATTGAACGACAGGGAAACACAGGGCTGCATCTGTGTTTTGCCCTCGACCATCTTATGTCTTAAGTGGAGCT 2732
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2733 ATGAAATGTCACCCTGATACTCAGGAATTCTCATTGAGAGAAGGTGTGGGATACTTTTGTTCTAACTTGTTTAA 2806
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2807 ATTCTTAATAAAGGTGTTTACACTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2880
Query 280 --- 279
Sbjct 2881 AAA 2883
