Nucleotide Global Alignment
Description
- Query:
- TRCN0000468959
- Subject:
- NR_135753.2
- Aligned Length:
- 5771
- Identities:
- 255
- Gaps:
- 5506
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT 74
Query 1 -----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATC 27
|||||||||||||||||||||||||||
Sbjct 75 TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATC 148
Query 28 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 222
Query 102 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGCCAGAAA 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGCCAGAAA 296
Query 176 ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGAAGACAACTG------------TTAGTTTTG-------- 229
|||||||||||||||||||||||||||||||||| |.|.||| .|||||.||
Sbjct 297 ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACT----ATACCTGCACTCAAATAACATAGTTGTGGTTCCGGA 366
Query 230 ------TGG----CTT-----ACTGCTGCTCCACCCAGTGTCTGCA-------GAC---------------TTT 266
||| ||| ||| |||.||||||.| ||| .||
Sbjct 367 AGCCATTGGGTCTCTTGTAAAACT----------CCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTT 430
Query 267 TGACCTG-----------CTGAGT-------------------------------------------------- 279
||.||.| |||||.
Sbjct 431 TGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCC 504
Query 280 -------------------------------------------------------------------------- 279
Sbjct 505 AGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAG 578
Query 280 -------------------------------------------------------------------------- 279
Sbjct 579 CTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATA 652
Query 280 -------------------------------------------------------------------------- 279
Sbjct 653 CGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTG 726
Query 280 -------------------------------------------------------------------------- 279
Sbjct 727 GTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCT 800
Query 280 -------------------------------------------------------------------------- 279
Sbjct 801 GAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCA 874
Query 280 -------------------------------------------------------------------------- 279
Sbjct 875 TACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGC 948
Query 280 -------------------------------------------------------------------------- 279
Sbjct 949 TGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCC 1022
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1023 TTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCAC 1096
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1097 CCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACAC 1170
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1171 TGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAG 1244
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1245 AAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAAAT 1318
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1319 TAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGATTGATG 1392
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1393 GGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCAGATTCC 1466
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1467 CTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTTCC 1540
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1541 CTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGC 1614
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1615 CTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAG 1688
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1689 GGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGACTTTTGT 1762
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1763 GAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAAAA 1836
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1837 TGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTGAAGCTT 1910
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1911 TACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAAAACACACATTGA 1984
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1985 AATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATACTGACTTTGAAATATTTTTGTCACAT 2058
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2059 GTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCA 2132
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2133 GGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCA 2206
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2207 GCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGG 2280
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2281 GGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGC 2354
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2355 TGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGT 2428
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2429 GCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACT 2502
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2503 GCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAA 2576
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2577 CAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCA 2650
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2651 AAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAAT 2724
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2725 GTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTA 2798
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2799 TTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTATAATGCT 2872
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2873 ACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAACACCTGC 2946
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2947 TGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACT 3020
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3021 GTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAAT 3094
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3095 AGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACCTCTACA 3168
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3169 TGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCT 3242
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3243 ATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATGGA 3316
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3317 GCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTTGTTTGA 3390
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3391 AATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAACAACAGC 3464
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3465 AGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGA 3538
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3539 GAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGTCATTCT 3612
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3613 TAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAATTGTGT 3686
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3687 CCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAG 3760
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3761 AAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGT 3834
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3835 TTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCC 3908
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3909 TATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATC 3982
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3983 ATACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTTGAGCAC 4056
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4057 ATTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGC 4130
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4131 TAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACAT 4204
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4205 CTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTC 4278
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4279 TGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCT 4352
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4353 TATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATT 4426
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4427 TTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCTATAAAG 4500
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4501 TACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGGATTTCT 4574
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4575 AACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAAACACAC 4648
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4649 TCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTT 4722
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4723 TTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTC 4796
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4797 TTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCG 4870
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4871 GCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGA 4944
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4945 GACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGC 5018
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5019 ACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAG 5092
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5093 CTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTT 5166
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5167 CACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTA 5240
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5241 GGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAA 5314
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5315 GTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGA 5388
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5389 AGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTC 5462
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5463 AAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAA 5536
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5537 TGATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCATTTGGAG 5610
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5611 TGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCT 5684
Query 280 ------------------------------------------------------------------------- 279
Sbjct 5685 TGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGATACGAA 5757
