Nucleotide Global Alignment
Description
- Query:
- TRCN0000468959
- Subject:
- NR_135758.2
- Aligned Length:
- 5881
- Identities:
- 252
- Gaps:
- 5603
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT 74
Query 1 -----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATC 27
|||||||||||||||||||||||||||
Sbjct 75 TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATC 148
Query 28 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 222
Query 102 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG------- 168
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTG 296
Query 169 ---CCAGAAAACCTTGCT-------CAGAAG-----------CTTCCAAACCT------TGTGGAACTGA-AGA 214
.||.|.|||.|.|.| |.|||| |||..|||.|| |.||||.||.| .||
Sbjct 297 CACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGA 370
Query 215 CAACTG--TTAG---TTTTGTG----------------------GCTT-------------------------- 235
||| || |||| ||.|.|| ||||
Sbjct 371 CAA-TGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAAC 443
Query 236 --ACTGC---TGCTCCACCCAGTG-----------------TCTGCAGAC--------TTTTGACC-------T 272
||||| |.||.|..||||.| .|||||||| |||..||| |
Sbjct 444 CAACTGCAATTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTT 517
Query 273 GCTGAGT------------------------------------------------------------------- 279
|||.|.|
Sbjct 518 GCTAACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGT 591
Query 280 -------------------------------------------------------------------------- 279
Sbjct 592 ATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTG 665
Query 280 -------------------------------------------------------------------------- 279
Sbjct 666 CCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCC 739
Query 280 -------------------------------------------------------------------------- 279
Sbjct 740 ATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGGCTTCTGTACTGCTGCACATGCTGTTCCCTCTGCTTGG 813
Query 280 -------------------------------------------------------------------------- 279
Sbjct 814 AATGCTCATAACACATTTCCATTTATTCCAGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCC 887
Query 280 -------------------------------------------------------------------------- 279
Sbjct 888 TTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCT 961
Query 280 -------------------------------------------------------------------------- 279
Sbjct 962 CCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGT 1035
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1036 CTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAG 1109
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1110 CCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAA 1183
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1184 GACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAA 1257
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1258 CACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTG 1331
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1332 TCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCA 1405
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1406 CCCTTCCCCCAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATG 1479
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1480 TGAGTGTGTCTTTTACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCC 1553
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1554 TTGGAGAACAGTGACTTGATCATCTAGCCAGATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCC 1627
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1628 TCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACT 1701
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1702 TGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTT 1775
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1776 GGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTT 1849
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1850 GTTTATACGTTCTACAGTGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAA 1923
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1924 TACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTT 1997
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1998 TTTATATGAGAAGAATTTGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTT 2071
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2072 CCATACAATGAGAAAGGGGGAGAAAACACACATTGAAATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGAT 2145
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2146 TCAGTTTATACTGACTTTGAAATATTTTTGTCACATGTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTT 2219
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2220 TGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAG 2293
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2294 CTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCA 2367
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2368 CGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTG 2441
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2442 ACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTA 2515
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2516 CTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTT 2589
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2590 CATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTC 2663
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2664 CAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACT 2737
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2738 CTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTT 2811
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2812 CATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTG 2885
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2886 AATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGA 2959
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2960 GGGAATTTTTATTAGCTGCCCTGACTTTATAATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTG 3033
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3034 ACAAATGTGTGATCTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGG 3107
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3108 CAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCT 3181
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3182 ATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCAT 3255
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3256 CCTTTGGAATAATTGAAGTTTAACATAACCTCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACT 3329
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3330 TCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTC 3403
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3404 TATTTCATCCTCTACAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCAT 3477
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3478 TGTGATAAGGTGATACATTAGTTTTACCTTGTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCT 3551
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3552 CTACCTATTATGAACTACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCT 3625
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3626 TAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATT 3699
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3700 ATGGAAATTTTATGCTGGATTTATCGATGTCATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGA 3773
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3774 GAAAATTTGCCTACATGCTATATATTTGAATTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATA 3847
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3848 TATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTG 3921
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3922 AGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTT 3995
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3996 TAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTA 4069
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4070 CCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGA 4143
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4144 AATGCTGCATCTTCAGTTAATACATGTTTTGAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCA 4217
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4218 AAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACC 4291
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4292 CTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTC 4365
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4366 CAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAG 4439
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4440 TCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAA 4513
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4514 CTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTG 4587
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4588 AATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAA 4661
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4662 CATTTTTATTAAGATGATTTATGAACATGGATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTT 4735
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4736 GAGATGTAAATTCATTTCACAGACTCATAAACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTA 4809
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4810 CCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTA 4883
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4884 CATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTG 4957
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4958 AAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGG 5031
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5032 CCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACT 5105
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5106 AAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAG 5179
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5180 AATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGA 5253
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5254 GCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCAT 5327
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5328 CAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTC 5401
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5402 TCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGAC 5475
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5476 AGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAA 5549
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5550 GAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATAT 5623
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5624 CAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCC 5697
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5698 AGGCCTCTGAAAAATTATGGCAACATTCATTTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCC 5771
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5772 TCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTA 5845
Query 280 ----------------------------------- 279
Sbjct 5846 TTTATTCAAGAGAAATGGCTGAATCTCGATACGAA 5880
