Nucleotide Global Alignment
Description
- Query:
- TRCN0000468959
- Subject:
- NR_135759.2
- Aligned Length:
- 6047
- Identities:
- 274
- Gaps:
- 5768
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGGTGAGTAGAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTCTGACCCGGCCCCCCGGCGGGGACGCCCCAGACGTGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAAAGCGTCCGGGTCGCGGCGAGTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGGACCCGAGAACCCTGATACCGGGTCCGTGAAATCCCTGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGCTCGCTGCTTCCCAACTGTAACGATCTCAGTGGCTGGCTAACTCGGGCGAAACGGCGTGTGTTTTGCCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCTGCCAGTGTTTGTTACCACAGCTGAGAAAATAGCCTTTTACAAATGCTTTTAATATGTAGCTTATAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTAATCTCCAGCGTTAGGAAATTGGAATGCGTATTCTACTAAATTGAGTACGGGGAGAAATGGACCAATTT 518
Query 1 ----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATCT 28
||||||||||||||||||||||||||||
Sbjct 519 TGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATCT 592
Query 29 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 666
Query 103 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG-------- 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGATACCTGC 740
Query 169 -------------------------------------------------------------------------- 168
Sbjct 741 ACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGAC 814
Query 169 ---------------------CCAGAAA---------------------------------------------- 175
|||||||
Sbjct 815 AATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCA 888
Query 176 ------------ACCT---------------------------------------------------------- 179
||||
Sbjct 889 ACTGCAATTCCTACCTCCAGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACC 962
Query 180 -------------------------------------------------------TGCTC-------------- 184
|||||
Sbjct 963 TGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCC 1036
Query 185 -------------------------------------------------------------------------- 184
Sbjct 1037 GAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGAC 1110
Query 185 ----------------------------------------AGA------------AGCTTCCAAACCTTG---- 202
||| |.||.|||.|.||||
Sbjct 1111 GGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGA 1184
Query 203 -----TGGAACT-------------------------------------------------------------- 209
|.|||||
Sbjct 1185 AAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCAC 1258
Query 210 -------------------------------------------------------------------------- 209
Sbjct 1259 TGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGC 1332
Query 210 ---------------GAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTG 268
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTG 1406
Query 269 ACCTGCTGAGT--------------------------------------------------------------- 279
|||||||||||
Sbjct 1407 ACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCA 1480
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1481 GCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCTAGAAATGTCATGATTGAGCTTC 1554
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1555 AGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAAATTAAGGACCCATTTGTCTTCT 1628
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1629 GTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTAATTT 1702
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1703 AAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCAGATTCCCTTTTGAACACACATACCTT 1776
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1777 CAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTTCCCTGAGACCATGTTCTCCACA 1850
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1851 GTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTGGCCTCAATGGTCTTGAGTAGCA 1924
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1925 GGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTGAGGGTCCCAGAGCACACACCCT 1998
Query 280 -------------------------------------------------------------------------- 279
Sbjct 1999 CTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGACTTTTGTGAGGGATTTTAAAAACAAAA 2072
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2073 ATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAAAATGATTTTTGAAGTTTTTAAA 2146
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2147 TTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTGAAGCTTTACAAGATCTGATTTTTTTC 2220
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2221 TTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAAAACACACATTGAAATAAGACCTCCGTGTTCTT 2294
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2295 TTTTGATGGGTTTATGATTCAGTTTATACTGACTTTGAAATATTTTTGTCACATGTGAAAGGCTTCAGCTACTT 2368
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2369 CCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGG 2442
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2443 ATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGAC 2516
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2517 CACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGG 2590
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2591 GATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 2664
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2665 ACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACAGCCCGTGCACATTTACTTCGTCACCT 2738
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2739 GGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAGCTTACTGCCCAGATGCAACTGAGAAA 2812
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2813 ATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATAAACAGAAAGTCTGTGAGCCTCC 2886
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2887 ACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTTCAAAGGATGGCATTTTAATGTT 2960
Query 280 -------------------------------------------------------------------------- 279
Sbjct 2961 GCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAAATGTTTTTTAATGATGTAAGTT 3034
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3035 TTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAAAAATTATTTTTTTTTAATTTCAGACT 3108
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3109 TATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTATAATGCTACGCTCTTAACAGTGCCAAA 3182
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3183 AATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAACACCTGCTGCCCGGAAAGCACACCGTC 3256
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3257 CACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCACTGTTCTTACTTCCTCTTGTCC 3330
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3331 CTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAGTAAAATAGGAACTGAAGATCTGTATC 3404
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3405 AAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACCTCTACATGTATATAAGTTAGCTGGTG 3478
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3479 AAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTGCTACCTATGATTTAAGTGACAGTAAA 3552
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3553 TGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATGGAGCTATGAAATGTGCTAACTT 3626
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3627 GGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTTGTTTGAAATTTTACAAAAATGCTTAC 3700
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3701 AATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAACAACAGCAGTGGGCTGGGCAGACAACC 3774
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3775 TTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGATGAGAAGTGGAACTTAAGTGGTT 3848
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3849 TCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGTCATTCTTAATCTTTTGATACTATAAA 3922
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3923 GGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAATTGTGTCCAAAGCTTTGCAGAAAAGC 3996
Query 280 -------------------------------------------------------------------------- 279
Sbjct 3997 AAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACTAGGTAGAAAAGTATTCACACAATAAT 4070
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4071 AGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAAGTTTACTTCAGTGAACTCTTGT 4144
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4145 GTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTTCCTATGAAGTAGTGCAAAGGGG 4218
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4219 GCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATTGTTATCATACCAAAAACCTTAATTAC 4292
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4293 ATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTTGAGCACATTCTTAAAATACATAATAA 4366
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4367 TTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCACTCTGGCTAACGGATAAGAGTGATGAA 4440
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4441 CTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATTAAACATCTTTTGGTCACCGTGCCTCA 4514
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4515 CTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACTTCTGTTTTACGTTGAGCATTAC 4588
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4589 GAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGGCTTATGAGGCTCTGCATATAAT 4662
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4663 TTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAATTTTTAAAATTAGTAGTAGTAA 4736
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4737 AGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCTATAAAGTACTTAAACACAATACATTG 4810
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4811 CCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGGATTTCTAACTGGACCAACACTAATGT 4884
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4885 TGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAAACACACTCTCTTTAAGACTCTTCTTT 4958
Query 280 -------------------------------------------------------------------------- 279
Sbjct 4959 AAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTTGTGGTTTTCATTCACTCCTGCTTGCT 5032
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5033 TCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGCCTTTTCTTCAAACAAAGGGGGTTTTT 5106
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5107 ATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAAGTCTCGGCAGTGGCTCATGCCTATAA 5180
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5181 TCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGG 5254
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5255 TGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGCGCACCTGCAGTCCCAGCTACTC 5328
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5329 GGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATTGAGCTGAGATCACGCCATTACAC 5402
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5403 TCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTCAAGTTTCACTGTGCCTACAGTGAGGA 5476
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5477 GCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTGTCTCTAGGAAAGGAATTGATCATAGC 5550
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5551 CAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTGAAGTATGACTGTATGTGTGGTC 5624
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5625 CCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCAGAAGGTGTAGCATTCGGAGATT 5698
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5699 ATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTTCCACTCAAGTGTGGATTATCTTTGCT 5772
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5773 ACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTAAATGATCCAAGATTTTTAAAAT 5846
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5847 AGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCATTTGGAGTGTGGCTAAAAACTCATACT 5920
Query 280 -------------------------------------------------------------------------- 279
Sbjct 5921 TTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAATTGAGCTTGAACCATGTGAATGCTCAG 5994
Query 280 ----------------------------------------------------- 279
Sbjct 5995 AATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGATACGAA 6047
