Nucleotide Global Alignment
Description
- Query:
- TRCN0000468960
- Subject:
- NM_001366244.1
- Aligned Length:
- 3052
- Identities:
- 230
- Gaps:
- 2795
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGGAAGAAACCCGACAGAGCAAATTGGCCGCAGCGAAGAAAAAGTTGAGAGAATATCAGCAGAGGAATAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGGTGTTCCTACAGGAGCGAAAAAGAAGAAGAAAATAAAAAATGGCAGTAACCCTGAGACAACCACTTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGTTGCCACTCACCTGAGGATATTCAGGACATTCTGAAGGTGCTGGTGTCCGACCTTAACCGTTCCAATGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAGCGCTCCCCCCATTGGACAAGTGGAAGACACCCAAGGACAATGCTGCTACTCTACAACCATCTGATGACAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGTGTTACCTGGCGGTGTCCCTTCCCCTGGTGCCAGTCTCACTAGCATGGCGGCATCTCAGAATCATGATGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACAATGTCCCTAATCTCATGGATGAAACCAAGACTTTCTCATCAACCGAGAGCCTGCGACAACTCTCCCAACAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCAATGGTCTTGTTTGTGAGTCTGCGACATGTGTCAATGGGGAGGGCCCTGCATCGTCTGCTAACCTGAAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGGAGAGCCGGTACCAACAGCTAGCGGTAGCCCTGGACTCCAGCTATGTAACAAACAAACAACTCAATATCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGATAGAGAAATTGAAACAACAGAACCAAGAAATTACGGATCAGTTGGAAGAAGAAAAGAAAGAATGCCACCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGCAGGGAGCCCTAAGGGAGCAGTTACAGGTTCACATTCAGACCATAGGGATCCTCGTATCAGAGAAAGCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTACAGACAGCCCTGGCTCACACTCAGCATGCTGCCAGGCAGAAAGAAGGAGAGTCTGAAGATCTGGCCAGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCTGCAGTATTCCCGGCGGCGTGTGGGAGAGTTGGAGCGGGCTCTCTCTGCTGTCTCCACGCAGCAGAAGAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGACAGGTACAACAAGGAGTTAACCAAAGAGAGAGACGCCCTCAGGCTGGAGTTATACAAGAACACCCAAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAATGAGGACCTGAAGCAAGAGAAATCAGAATTGGAAGAGAAGCTTCGGGTCCTAGTGACTGAGAAGGCTGGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCAGCTTAACTTGGAAGAATTGCAAAAGAAGTTAGAGATGACGGAACTCCTGCTTCAACAGTTTTCAAGCCGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTGAAGCCCCTGATGCTAACCAGCAGTTACAGCAGGCCATGGAGGAGCGGGCACAGCTGGAAGCACACCTGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGGTAATGGAGTCGGTTAGACAACTACAAATGGAGAGAGATAAATATGCGGAGAATCTCAAAGGAGAGAGCG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCATGTGGCGGCAGAGGATGCAGCAGATGTCAGAGCAGGTGCACACATTGAGAGAGGAGAAGGAATGTAGCATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTCGGGTACAGGAGCTGGAGACGAGCTTGGCTGAACTGAGGAACCAGATGGCTGAACCCCCGCCCCCAGAGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCCAGCAGGGCCCTCCGAGGTGGAGCAGCAGCTACAAGCGGAGGCTGAGCACCTGCGGAAGGAGCTGGAGGGTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGGCAGGACAGCTTCAAGCCCAGGTGCAAGACAATGAGGGCTTGAGTCGCCTGAACCGGGAGCAGGAGGAGAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGCTGGAGCTGGAGCGGGCGGCCGAGCTCTGGGGGGAGCAGGCGGAGGCGCGCAGGCAAATCCTGGAGACCAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCAGAACGACCGCACTACCATCAGCCGCGCACTCTCCCAGAACCGGGAGCTCAAGGAGCAGCTGGCTGAGCTGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAGCGGATTTGTAAAGCTGACTAATGAGAACATGGAGATCACCAGCGCACTGCAGTCGGAGCAGCACGTCAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGGAGCTGGGAAAGAAGCTGGGCGAGCTGCAGGAGAAGCTGAGCGAGCTGAAGGAAACGGTGGAGCTGAAGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAAGAGGCTCAAAGTCTGCAGCAGCAGCGAGACCAGTACCTGGGACACCTGCAGCAGTATGTGGCCGCCTATC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCAGCTGACCTCTGAGAAGGAGGTGCTGCATAATCAGCTACTGCTGCAGACCCAGCTCGTGGACCAGCTGCAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGCAGGAAGCTCAGGGCAAAGCGGTGGCCGAGATGGCCCGCCAAGAGTTGCAGGAAACCCAGGAGCGCCTGGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCTGCCACCCAGCAGAATCAGCAGCTACGGGCCCAGTTGAGCCTCATGGCTCACCCTGGGGAAGGAGATGGAC 2146
Query 1 -----------------------------------------------------------------ATGCCGAAC 9
|||||.|.|
Sbjct 2147 TGGACCGGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGCGGTGGCAGTACCTCAGCCCATGCCAAGC 2220
Query 10 ATCCCAGGGGACCTGGAGAGCCGGGAGGCCATGGTGGCATTTTTCAACTCCGCTGGAGCCAGTGCCCAGG---- 79
|||||.|.||||||||||||||||||.|||||||||||||||||||||||.||||.||||||||||.|||
Sbjct 2221 ATCCCGGAGGACCTGGAGAGCCGGGAAGCCATGGTGGCATTTTTCAACTCAGCTGTAGCCAGTGCCGAGGAGGA 2294
Query 80 --------------------------AGGAACAAAGGGTGTGCTGCCAGCCCCTGGCTCACCCAGTGGCCTCGT 127
||||.|||||||||.||||||.||.|||||||||||...||||||||.
Sbjct 2295 GCAGGCAAGGCTACGTGGGCAGCTGAAGGAGCAAAGGGTGCGCTGCCGGCGCCTGGCTCACCTGCTGGCCTCGG 2368
Query 128 CCCAGAAGAAGCCAGAGGTAGCGGCCCCAGCCCCAGAGAGTGGGGGTGAGTCTGTGTTTGGGGAGACCCACCGG 201
||||||||.||||.||||.|||.|||||||||||||.||..||||||||.|||||||.||||||||||||||||
Sbjct 2369 CCCAGAAGGAGCCTGAGGCAGCAGCCCCAGCCCCAGGGACCGGGGGTGATTCTGTGTGTGGGGAGACCCACCGG 2442
Query 202 GCCCTGCAGGGGGCCATGGAGAAGCTGCAG---CGACTTTATGGA--------AGGAGAAGGTGGACC------ 258
|||||||||||||||||||||||||||||| || ||||||||| |||||||||..||||
Sbjct 2443 GCCCTGCAGGGGGCCATGGAGAAGCTGCAGAGCCG-CTTTATGGAGCTCATGCAGGAGAAGGCAGACCTGAAGG 2515
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2516 AGAGGGTAGAGGAACTGGAACATCGCTGCATCCAGCTTTCTGGAGAGACAGACACCATTGGAGAGTACATTGCA 2589
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2590 CTGTACCAGAGCCAGAGGGCAGTGCTGAAGGAGCGGCACCGGGAGAAGGAGGAGTACATCAGCAGGCTGGCCCA 2663
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2664 AGACAAGGAGGAGATGAAGGTGAAGCTGCTGGAGCTGCAGGAGCTGGTCTTACGGCTTGTGGGCGACCGCAACG 2737
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2738 AGTGGCATGGCAGATTCCTGGCAGCTGCCCAGAACCCTGCTGATGAGCCCACTTCAGGGGCCCCAGCCCCCCAG 2811
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2812 GAACTTGGGGCTGCCAACCAGCAGGGTGATCTTTGCGAGGTGAGCCTCGCCGGCAGTGTGGAGCCTGCCCAAGG 2885
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2886 AGAGGCCAGGGAGGGTTCTCCCCGTGACAACCCCACTGCACAGCAGATCATGCAGCTGCTTCGTGAGATGCAGA 2959
Query 259 -------------------------------------------------------------------------- 258
Sbjct 2960 ACCCCCGGGAGCGCCCAGGCTTGGGCAGCAACCCCTGCATTCCTTTTTTTTACCGGGCTGACGAGAATGATGAG 3033
Query 259 ------------------ 258
Sbjct 3034 GTGAAGATCACTGTCATC 3051
