Nucleotide Global Alignment
Description
- Query:
- TRCN0000469015
- Subject:
- XR_001742279.1
- Aligned Length:
- 2784
- Identities:
- 1733
- Gaps:
- 1050
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCACATGACACGGCCAAGATGGCCGACCGGGAAGGCGGCTGCGCTGCTGGGCGGGGGCGGGAGCTGGAGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCTGGAGCCGGGGCCGGGGCCCGGGTCAGCGCTTGAGCCGGGAGAAGAGTTTGAGATCGTGGACCGAAGCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCCGGCCCAGGCGACCTGCGGAGCGCAACGAGGCCGCGGGCGGCCGAGGGCTGGTCGGCGCCCATCCTGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGGCACGCAGGGCCACCGGGAACCTGTCGGCGAGCTGCGGGAGCGCGCTGCGCGCGGCCGCGGGGCTGGGCG 296
Query 1 -----------------------------------------------ATGATGGAGGAGCGTGCCAACCTGATG 27
|||||||||||||||||||||||||||
Sbjct 297 GCGGGGACAGCGGGGACGGCACGGCGCGCGCAGCTTCTAAGTGCCAGATGATGGAGGAGCGTGCCAACCTGATG 370
Query 28 CACATGATGAAACTCAGCATCAAGGTGTTGCTCCAGTCGGCTCTGAGCCTGGGCCGCAGCCTGGATGCGGACCA 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACATGATGAAACTCAGCATCAAGGTGTTGCTCCAGTCGGCTCTGAGCCTGGGCCGCAGCCTGGATGCGGACCA 444
Query 102 TGCCCCCTTGCAGCAGTTCTTTGTAGTGATGGAGCACTGCCTCAAACATGGGCTGAAAGTTAAGAAGAGTTTTA 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGCCCCCTTGCAGCAGTTCTTTGTAGTGATGGAGCACTGCCTCAAACATGGGCTGAAAGTTAAGAAGAGTTTTA 518
Query 176 TTGGCCAAAATAAATCATTCTTTGGTCCTTTGGAGCTGGTGGAGAAACTTTGTCCAGAAGCATCAGATATAGCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTGGCCAAAATAAATCATTCTTTGGTCCTTTGGAGCTGGTGGAGAAACTTTGTCCAGAAGCATCAGATATAGCG 592
Query 250 ACTAGTGTCAGAAATCTTCCAGAATTAAAGACAGCTGTGGGAAGAGGCCGAGCGTGGCTTTATCTTGCACTCAT 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACTAGTGTCAGAAATCTTCCAGAATTAAAGACAGCTGTGGGAAGAGGCCGAGCGTGGCTTTATCTTGCACTCAT 666
Query 324 GCAAAAGAAACTGGCAGATTATCTGAAAGTGCTTATAGACAATAAACATCTCTTAAGCGAGTTCTATGAGCCTG 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAAAAGAAACTGGCAGATTATCTGAAAGTGCTTATAGACAATAAACATCTCTTAAGCGAGTTCTATGAGCCTG 740
Query 398 AGGCTTTAATGATGGAGGAAGAAGGGATGGTGATTGTTGGTCTGCTGGTGGGACTCAATGTTCTCGATGCCAAT 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGCTTTAATGATGGAGGAAGAAGGGATGGTGATTGTTGGTCTGCTGGTGGGACTCAATGTTCTCGATGCCAAT 814
Query 472 CTCTGCTTGAAAGGAGAAGACTTGGATTCTCAGGTTGGAGTAATAGATTTTTCCCTCTACCTTAAGGATGTGCA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCTGCTTGAAAGGAGAAGACTTGGATTCTCAGGTTGGAGTAATAGATTTTTCCCTCTACCTTAAGGATGTGCA 888
Query 546 GGATCTTGATGGTGGCAAGGAGCATGAAAGAATTACTGATGTCCTTGATCAAAAAAATTATGTGGAAGAACTTA 619
|||||||||||||||||||||
Sbjct 889 GGATCTTGATGGTGGCAAGGA----------------------------------------------------- 909
Query 620 ACCGGCACTTGAGCTGCACAGTTGGGGATCTTCAAACCAAGATAGATGGCTTGGAAAAGACTAACTCAAAGCTT 693
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 910 -------------CTGCACAGTTGGGGATCTTCAAACCAAGATAGATGGCTTGGAAAAGACTAACTCAAAGCTT 970
Query 694 CAAGAAG------------------------------------------------------------------- 700
|||||||
Sbjct 971 CAAGAAGAGGAAGAGAGAATGAAAGGACAGGACAAAGGAGGGCTGAGCCGAGGAAGAGAGCTTGCTGCCAGCTG 1044
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1045 CCCGGCAGTCTCCTTGCTGGACACATCTTGTCTCCTGTTAGCAGGAGGGGGGTGCTCAGCCCTTCTGAGGCTTT 1118
Query 701 ----AGCTTTCAGCTGCAACAGACCGAATTTGCTCACTTCAAGAAGAACAGCAGCAGTTAAGAGAACAAAATGA 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 CCACAGCTTTCAGCTGCAACAGACCGAATTTGCTCACTTCAAGAAGAACAGCAGCAGTTAAGAGAACAAAATGA 1192
Query 771 ATTAATTCGAGAAAGAAGTGAAAAGAGTGTAGAGATAACAAAACAGGATACCAAAGTTGAGCTGGAGACTTACA 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 ATTAATTCGAGAAAGAAGTGAAAAGAGTGTAGAGATAACAAAACAGGATACCAAAGTTGAGCTGGAGACTTACA 1266
Query 845 AGCAAACTCGGCAAGGTCTGGATGAAATGTACAGTGATGTGTGGAAGCAGCTAAAAGAGGAGAAGAAAGTCCGG 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1267 AGCAAACTCGGCAAGGTCTGGATGAAATGTACAGTGATGTGTGGAAGCAGCTAAAAGAGGAGAAGAAAGTCCGG 1340
Query 919 TTGGAACTGGAAAAAGAACTGGAGTTACAAATTGGAATGAAAACCGAAATGGAAATTGCAATGAAGTTACTGGA 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1341 TTGGAACTGGAAAAAGAACTGGAGTTACAAATTGGAATGAAAACCGAAATGGAAATTGCAATGAAGTTACTGGA 1414
Query 993 AAAGGACACCCACGAGAAGCAGGACACACTAGTTGCCCTCCGCCAGCAGCTGGAAGAAGTCAAAGCGATTAATT 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1415 AAAGGACACCCACGAGAAGCAGGACACACTAGTTGCCCTCCGCCAGCAGCTGGAAGAAGTCAAAGCGATTAATT 1488
Query 1067 TACAGATGTTTCACAAAGCTCAGAATGCAGAGAGCAGTTTGCAGCAGAAGAATGAAGCCATCACATCCTTTGAA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1489 TACAGATGTTTCACAAAGCTCAGAATGCAGAGAGCAGTTTGCAGCAGAAGAATGAAGCCATCACATCCTTTGAA 1562
Query 1141 GGAAAAACCAACCAAGTTATGTCCAGCATGAAACAAATGGAAGAAAGGTTGCAGCACTCGGAGCGGGCGAGGCA 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1563 GGAAAAACCAACCAAGTTATGTCCAGCATGAAACAAATGGAAGAAAGGTTGCAGCACTCGGAGCGGGCGAGGCA 1636
Query 1215 GGGAGCTGAGGAGCGGAGCCACAAGCTGCAGCAGGAGCTGGGCGGGAGGATCGGCGCCCTGCAGCTGCAGCTCT 1288
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637 GGGGGCTGAGGAGCGGAGCCACAAGCTGCAGCAGGAGCTGGGCGGGAGGATCGGCGCCCTGCAGCTGCAGCTCT 1710
Query 1289 CCCAGCTGCACGAGCAATGCTCAAGCCTGGAGAAAGAATTGAAATCAGAAAAAGAGCAAAGACAGGCTCTTCAG 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1711 CCCAGCTGCACGAGCAATGCTCAAGCCTGGAGAAAGAATTGAAATCAGAAAAAGAGCAAAGACAGGCTCTTCAG 1784
Query 1363 CGCGAATTACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATGGAGCTGCAACAAGTGGAAGGACTGAAAAA 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1785 CGCGAATTACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATGGAGCTGCAACAAGTGGAAGGACTGAAAAA 1858
Query 1437 GGAGTTGCGGGAGCTTCAGGACGAGAAGGCAGAGCTGCAGAAGATCTGCGAGGAGCAGGAACAAGCCCTCCAGG 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1859 GGAGTTGCGGGAGCTTCAGGACGAGAAGGCAGAGCTGCAGAAGATCTGCGAGGAGCAGGAACAAGCCCTCCAGG 1932
Query 1511 AAATGGGCCTGCACCTCAGCCAGTCCAAGCTGAAGATGGAAGATATAAAAGAAGTGAACCAGGCACTGAAGGGC 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1933 AAATGGGCCTGCACCTCAGCCAGTCCAAGCTGAAGATGGAAGATATAAAAGAAGTGAACCAGGCACTGAAGGGC 2006
Query 1585 CACGCCTGGCTGAAAGATGACGAAGCGACACACTGTAGGCAGTGTGAGAAGGAGTTCTCCATTTCCCGGAGAAA 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2007 CACGCCTGGCTGAAAGATGACGAAGCGACACACTGTAGGCAGTGTGAGAAGGAGTTCTCCATTTCCCGGAGAAA 2080
Query 1659 GCACCACTGCCGGAACTGTGGCCACATCTTCTGCAACACCTGCTCCAGCAACGAGCTGGCCCTGCCCTCCTACC 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2081 GCACCACTGCCGGAACTGTGGCCACATCTTCTGCAACACCTGCTCCAGCAACGAGCTGGCCCTGCCCTCCTACC 2154
Query 1733 CCAAGCCGGTGCGAGTGTGCGACAGCTGCCACACCCTGCTCCTGCAGCGCTGCTCCTCCACGGCCTCC------ 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 CCAAGCCGGTGCGAGTGTGCGACAGCTGCCACACCCTGCTCCTGCAGCGCTGCTCCTCCACGGCCTCCTGAACG 2228
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 2229 TCCGTCCTCAGGAGCACAGCCTCACGGACAGTGCCAAACCCTGTGGGTCTCCAGGGGCTTGGGAAATGTGTTCT 2302
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 2303 TTCCCAAGAGTATCAAAGGAAAGAATCAAATTTCTTGCCCGGTCACTGGCACTCCAGAAGACAGCGTGCCGGAA 2376
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 2377 CCGGCAGCTCTCACCTTTCTGTGACTTGTTCGGAATTAACTCCTCTGGATGGAAACTTCCATCTTACTTGGTTA 2450
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 2451 CATCACGGCTCTGGTTCAGATACAACTTCATGATTTTGCTACTATCATTTTTCACTTTTCAAAGAATTTAACCT 2524
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 2525 ATTTTACAGCAGTTCAGTTCTGCTAGTGAGTAGTTTTCCTCTCCTACCTTCCTTCTAAAAACCTGATTCATGCA 2598
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 2599 CAGCGTTTGACACACATGGAGTCTGCCAGTGTGCCTTCTCTGCTTCAGACAAGAGATCTGCCATTTCATGCCCT 2672
Query 1801 ---------------------------------------------- 1800
Sbjct 2673 TGTGACTACCTATCATTGGCCCTGCAATAAAATCATTTATTTTTCA 2718
