Nucleotide Global Alignment
Description
- Query:
- TRCN0000469015
- Subject:
- XR_001779948.1
- Aligned Length:
- 5211
- Identities:
- 1589
- Gaps:
- 3411
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGATGGGGACTGCGTTGTTGAGACAGGGTTTCTCTGTGTAACTCTGGCTGTCCTGGAACTCACTCCGTTGACTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTGTCCTCAGCGATATTGCCTGCCTATGCCTCCCTGATGCTGGGATTAAATGCTTGTCCCACCACCACTTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTACATGGCCTGTTTTAATGTCTCCCTTGTGTGGGGGAAAGAAACAACAATAACAACAACAAATAAAAATCCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGTGAGATTTTGATTCAAAGGGGGAAAAGGCATGTGAAATGAAAGTTTAAAAGAGGAAGTTGTGTCGCAAAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTTAAAATAAGGCGCATTCCCGGGGTGGGAAGTAGAAAGTCCAAAAGTAACTTCCAAGTGCTCCGGGCTGGGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCACCTACGGTTAGGAATCGTACTTTCCCGAATGCTATACAAGGAAAGCAAGCCCAGGTGAGAGCGAGCAAGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCAGCGGCTTAAGGTCGTCGGTCCAGGGCAGCGGCGGGTCACGTGACCTAACAACATGGCCGCCCGCGGAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGCCGCCGGGCGGGGCAGGATTCGGAGCCGGAGCCGGAGCGGGAGCCGGAGTCCGAGCCGGGGCCGGAGCCTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCCCAAGCAGGCCTAGAGTCCGGGGAAGCGTTCGAGATCGTGGACCGGAGCCAGCTGCCGAGTCCCGGCGAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCGGAGTGCGTCGCGGCCTCGAGTGGCCGACAGCTGGTCGGCGCCCATCCTGACGCTGGCGCGCAGAGCCACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGAACCTGTCGGCGAGCTGCGGCAGCGCGCTGCGCGCGGCCGCGGGGCTGGGAGACGGCGGCGGCGGCGGGGA 814
Query 1 ----------------------ATGATGGAGGAGCGTGCCAACCTGATGCACATGATGAAACTCAGCATCAAGG 52
|||||||||||||||||||||||.|||||||||||||||||||||||.||||
Sbjct 815 GCGCGCAGCTTCCAAAGGCCAGATGATGGAGGAGCGTGCCAACCTAATGCACATGATGAAACTCAGCATTAAGG 888
Query 53 TGTTGCTCCAGTCGGCTCTGAGCCTGGGCCGCAGCCTGGATGCGGACCATGCCCCCTTGCAGCAGTTCTTTGTA 126
|.||.||||||||.||.||.||||||||.|||||.||||||||.|||.||||||||||||||||||||||||||
Sbjct 889 TCTTACTCCAGTCTGCCCTTAGCCTGGGACGCAGTCTGGATGCAGACTATGCCCCCTTGCAGCAGTTCTTTGTA 962
Query 127 GTGATGGAGCACTGCCTCAAACATGGGCTGAAAGTTAAGAAGAGTTTTATTGGCCAAAATAAATCATTCTTTGG 200
|||||||||||.|||||||||||||||||||||||.|||||||||||.||||||||||||||.||.||||||||
Sbjct 963 GTGATGGAGCATTGCCTCAAACATGGGCTGAAAGTCAAGAAGAGTTTCATTGGCCAAAATAAGTCTTTCTTTGG 1036
Query 201 TCCTTTGGAGCTGGTGGAGAAACTTTGTCCAGAAGCATCAGATATAGCGACTAGTGTCAGAAATCTTCCAGAAT 274
||||||||||||||||||.|||||||||||.|||||||||||||||||.||.||||||||.||||||||||||.
Sbjct 1037 TCCTTTGGAGCTGGTGGAAAAACTTTGTCCTGAAGCATCAGATATAGCTACCAGTGTCAGGAATCTTCCAGAAC 1110
Query 275 TAAAGACAGCTGTGGGAAGAGGCCGAGCGTGGCTTTATCTTGCACTCATGCAAAAGAAACTGGCAGATTATCTG 348
||||||||||.||||||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1111 TAAAGACAGCCGTGGGAAGAGGCAGAGCGTGGCTTTATCTTGCTCTCATGCAAAAGAAACTGGCAGATTATCTG 1184
Query 349 AAAGTGCTTATAGACAATAAACATCTCTTAAGCGAGTTCTATGAGCCTGAGGCTTTAATGATGGAGGAAGAAGG 422
|||||.||.||||||||.||.||.|||.||||.||||||||||||||.|||||.||||||||||||||.|||||
Sbjct 1185 AAAGTCCTCATAGACAACAAGCAGCTCCTAAGTGAGTTCTATGAGCCCGAGGCCTTAATGATGGAGGAGGAAGG 1258
Query 423 GATGGTGATTGTTGGTCTGCTGGTGGGACTCAATGTTCTCGATGCCAATCTCTGCTTGAAAGGAGAAGACTTGG 496
.||||||||.||.||||||||||||||||||||.|||||.||||||||.||||||||.||.|||||||||||||
Sbjct 1259 AATGGTGATCGTGGGTCTGCTGGTGGGACTCAACGTTCTGGATGCCAACCTCTGCTTAAAGGGAGAAGACTTGG 1332
Query 497 ATTCTCAGGTTGGAGTAATAGATTTTTCCCTCTACCTTAAGGATGTGCAGGATCTTGATGGTGGCAAGGAGCAT 570
||||||||||.||.||.||.||.||.||.||||..||.|||||.|..|||||||||||..|.||||..||||||
Sbjct 1333 ATTCTCAGGTCGGGGTGATTGACTTCTCTCTCTGTCTGAAGGACGCACAGGATCTTGACAGCGGCAGAGAGCAT 1406
Query 571 GAAAGAATTACTGATGTCCTTGATCAAAAAAATTATGTGGAAGAACTTAACCGGCACTTGAGCTGCACAGTTGG 644
|||||||||||.||||||||||||||.||||||||.|||||.|||||||||||||||.|.||||||||||||||
Sbjct 1407 GAAAGAATTACCGATGTCCTTGATCAGAAAAATTACGTGGAGGAACTTAACCGGCACCTAAGCTGCACAGTTGG 1480
Query 645 GGATCTTCAAACCAAGATAGATGGCTTGGAAAAGACTAACTCAAAGCTTCAAGAAG------------------ 700
|||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1481 GGATCTTCAGACGAAGATAGATGGCTTGGAAAAGACGAACTCAAAGCTTCAAGAAGAGGAAGAGAGAGAGACTG 1554
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1555 AAAGGACAGGAAGAAGGAGGGCTGAGGCTGAGGAAGAAGGCTTGCTGCCCGCTGCCCGGCAATCTCCCTGCTGG 1628
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1629 ATACATCTTGTCTCCTGTTAGCAGGAGGGGGGTTGCTCAGCCTTGAGACTTTTCCACAGGTAGTAGGAAGGAGG 1702
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1703 AAAGCTTTAAGAAGGGGCTTAAGAAGGCACATCCCGAAGTATGGAGGCAGGATGCAGCAGGCTAGGAGGGTCTG 1776
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1777 TAAGTGAAGGACCCACCAAGGCTTACTGTAGGCTGCTCTCCTTAGGGGCTTTCCGGCAAAGGGCTCAGGACTTT 1850
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1851 GTGAGTGGAAGGATACCCACAGACGATATTCCCAGGGGATTGTCATGTGAGGCACCACTGCAGTTAGCCCACAT 1924
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1925 TCCTTGCTTGGTAGGCAGGCCTTGGAGCCTCCAGGAGATAGGTAGGTCTTTAAGCCTCATTCTTATGTCTCCCA 1998
Query 701 -------------------------------------------------------------------------- 700
Sbjct 1999 GCTGGGTGATACATGGAATTTATAATTTTGTTGTGGACATTATAAATACTCATGAAGCAGGGCTGGGGGAGGGG 2072
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2073 CTGAAGGCTTGGGTGACTTTAGAACAGGACGCTGCTCCCAGGCAGGTGCATGCTTCAGCCTTGTACTCTTGAAA 2146
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2147 CTCAGCAGCTGGGTGTGTTCTTCAGCAGACTGTAGGAAAAGACCTGCTCTAGAGAAACCTTCACCCAGGAATGG 2220
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2221 GAAGTAGCTGACGGCTGTGACTTGCTTCTTCCTGTTTGACAACTAACACCTCCAGGCCTTAGGCTGTCTTTCTT 2294
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2295 AGGCCCGACAGTTGTTGAAAACCATCAGTCGGGAGTCTTAGGAGAACTCTGGAGGGTTTTAGAGGGCAGTTCAG 2368
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2369 TGTCTCATGATCCCTCCACTGAGGGAAGACAAACAGATGGCTTGCTCCTCACTCCTCCTCATGAATGAATCCAA 2442
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2443 CTATTCTTCCTTTAAGCCGTGATGACACATCTCAGGATTTCTGATGACTTAAGTTTGATTCTTTCCTCCAAAAT 2516
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2517 CTTTAATCACCCTTGACAATAAAATATATTTCCGCTGATCAAGAAACTGACCGTGAGAGCTGGGGACCTGGCTC 2590
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2591 AGTGGGAGAGTGTGTGCTCCATAGCATAGGACCTGAGGGGGGCATCTCCAGCCCCCAGTCAGAGCCCCGCAGGG 2664
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2665 AGAGTGCTTGCTCCACAGCATAGGACCTGAGGGGGCGTCTCCAGCCACCCCCCCCACCCCCGTTAGAGCCCTGC 2738
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2739 AGGCCTGCACGCGCCTGGAACCCTAGCGCTGGGAAGCAGAGACAGGCAGATCTATGGGCTCACCAGGCCAGGAA 2812
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2813 GCCTAACCAGAACAGCACACTCCTCTGCGGCCTCAAAAACTAGGGTGGAACCATAGAGAAGGACCTCCACTGTC 2886
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2887 AACCTCTGACGTTCGTTCGCATGTGCAGGCACAGGCAGGGGTGTGGACACAGGCAACAACAAACAGGGCTGAGA 2960
Query 701 -------------------------------------------------------------------------- 700
Sbjct 2961 ATGGCAGTACACTGTGCTAATCTCCGTACCTGGAAGGCAGAGGCAAGCTTGTCTCTGTGAGTTCCAGGCCAGCC 3034
Query 701 -------------------------------------------------------------------------- 700
Sbjct 3035 AGGAGCTACGCAGTGAGACCCCATCCAAGAAGCAAGAACACACTGAGATCCCTTTGCCTCTCAGCATAAATAGT 3108
Query 701 -------------------------------------------------------------------------- 700
Sbjct 3109 CCCCATTTTACACATTTGGGGCCTGCTTGATTTTTTAAATAACTGTGAGAGTGTACCATACAACATGTCCCACT 3182
Query 701 -------------------------------------------------------------------------- 700
Sbjct 3183 GTTGGTATAAAAATTTCTCGTCATTAAAAGCTATTCTAAATGTTTAAGTAATGGCAGATTTCTGTTTGGTGCTT 3256
Query 701 -------------------------------------------------------------------------- 700
Sbjct 3257 CTATTGTAGTGGATGATTTGTACGTGTATGTACATAAATTTTCACTCACATGAAGCATGAAGTAACTGATTTTA 3330
Query 701 -------------------------------------------------------------------------- 700
Sbjct 3331 CAATGTGGGCAAAAAATTGGAGCGGGTACAGAAAGCCAGGATGGGGCGGGTGCAACAGAGGTCTCACAGACCAA 3404
Query 701 -------------------------------------------------------------------------- 700
Sbjct 3405 CAGAGATGTCTCTGGGACTTTGAACCACACGTTCCCTATCTAAAGCAAGGAAACAAAACGAAACACAAGGCGCT 3478
Query 701 -------------------------------------------------------------------------- 700
Sbjct 3479 GAGGCGCATCATAAGCTGTGCAGGAGCTCAGTGTCAGCTCTCAATGTGGGCAGCAAGATTAACTCTGATGTTAA 3552
Query 701 ---------------------------AGCTTTCAGCTGCAACAGACCGAATTTGCTCACTTCAAGAAGAACAG 747
||||||||||||||||||||||||||||.||.||.|||.|||||||.
Sbjct 3553 AAAACATGTACGAAATCTTTCTTAATCAGCTTTCAGCTGCAACAGACCGAATTTGTTCCCTACAAAAAGAACAA 3626
Query 748 CAGCAGTTAAGAGAACAAAATGAATTAATTCGAGAAAGAAGTGAAAAGAGTGTAGAGATAACAAAACAGGATAC 821
||||||.|.||||||||.||.|||.||||||||||||||||.||.|||||.||.|||||||||||||||||.||
Sbjct 3627 CAGCAGCTGAGAGAACAGAACGAAGTAATTCGAGAAAGAAGCGAGAAGAGCGTGGAGATAACAAAACAGGACAC 3700
Query 822 CAAAGTTGAGCTGGAGACTTACAAGCAAACTCGGCAAGGTCTGGATGAAATGTACAGTGATGTGTGGAAGCAGC 895
|||.|||||.|||||||||||.|||||.||.|||||.||.|||||||||||||||||.|||||||||||.||||
Sbjct 3701 CAAGGTTGAACTGGAGACTTATAAGCAGACCCGGCAGGGCCTGGATGAAATGTACAGCGATGTGTGGAAACAGC 3774
Query 896 TAAAAGAGGAGAAGAAAGTCCGGTTGGAACTGGAAAAAGAACTGGAGTTACAAATTGGAATGAAAACCGAAATG 969
|.||.|||||||||||||||||..|||||||||||||.||.||||||||.||.|||||||||||.||.||.|||
Sbjct 3775 TGAAGGAGGAGAAGAAAGTCCGACTGGAACTGGAAAAGGAGCTGGAGTTGCAGATTGGAATGAAGACGGAGATG 3848
Query 970 GAAATTGCAATGAAGTTACTGGAAAAGGACACCCACGAGAAGCAGGACACACTAGTTGCCCTCCGCCAGCAGCT 1043
||.||.||.||||||||.|||||.|||||||||||.||||||||.|||||.||.||||||||||||||||||||
Sbjct 3849 GAGATCGCCATGAAGTTGCTGGAGAAGGACACCCATGAGAAGCAAGACACGCTCGTTGCCCTCCGCCAGCAGCT 3922
Query 1044 GGAAGAAGTCAAAGCGATTAATTTACAGATGTTTCACAAAGCTCAGAATGCAGAGAGCAGTTTGCAGCAGAAGA 1117
|||.|||||||||||.|||||.|||||||||||||||||||.|||||.|||||||||||||||.||||||||||
Sbjct 3923 GGAGGAAGTCAAAGCTATTAACTTACAGATGTTTCACAAAGTTCAGAGTGCAGAGAGCAGTTTACAGCAGAAGA 3996
Query 1118 ATGAAGCCATCACATCCTTTGAAGGAAAAACCAACCAAGTTATGTCCAGCATGAAACAAATGGAAGAAAGGTTG 1191
|||||||||||.||||.||||||||||||||||..||.||.||||||||||||||.||||||||.||||||||.
Sbjct 3997 ATGAAGCCATCGCATCTTTTGAAGGAAAAACCACTCAGGTGATGTCCAGCATGAAGCAAATGGAGGAAAGGTTA 4070
Query 1192 CAGCACTCGGAGCGGGCGAGGCAGGGAGCTGAGGAGCGGAGCCACAAGCTGCAGCAGGAGCTGGGCGGGAGGAT 1265
|||||..||||.|||||.|||||||..||.||.|||||.|||||||||.|||||||||||||..||||||||..
Sbjct 4071 CAGCAGGCGGAACGGGCCAGGCAGGCGGCAGAAGAGCGAAGCCACAAGTTGCAGCAGGAGCTCAGCGGGAGGGG 4144
Query 1266 CGGCGCCCTGCAGCTGCAGCTCTCCCAGCTGCACGAGCAATGCTCAAGCCTGGAGAAAGAATTGAAATCAGAAA 1339
|.|.|||||||||||.|||||.||||||||||..||.|||||||||.|.||.|||||||||.||||.|||||||
Sbjct 4145 CAGTGCCCTGCAGCTCCAGCTGTCCCAGCTGCGGGACCAATGCTCAGGTCTAGAGAAAGAACTGAAGTCAGAAA 4218
Query 1340 AAGAGCAAAGACAGGCTCTTCAGCGCGAATTACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATGGAGCTG 1413
||||.||||||||.|||||.|||.|.|||.||||||..|||||||||||.||.|.|||.|||..||.|||||||
Sbjct 4219 AAGAACAAAGACAAGCTCTCCAGAGAGAACTACAGCGTGAGAAAGACACCTCTTGTCTGCTCCAGACGGAGCTG 4292
Query 1414 CAACAAGTGGAAGGACTGAAAAAGGAGTTGCGGGAGCTTCAGGACGAGAAGGCAGAGCTGCAGAAGATCTGCGA 1487
||.|||||||||||.|||||.||||||.||||||||||.||.|||||||||||||||.|.|.||||.||||.||
Sbjct 4293 CAGCAAGTGGAAGGCCTGAAGAAGGAGCTGCGGGAGCTCCAAGACGAGAAGGCAGAGTTACGGAAGGTCTGTGA 4366
Query 1488 GGAGCAGGAACAAGCCCTCCAGGAAATGGGCCTGCACCTCAGCCAGTCCAAGCTGAAGATGGAAGATATAAAAG 1561
|||||||||.||||||||||||||||||||.||.|||||.|||||||||||.||||||||||||||.|||||.|
Sbjct 4367 GGAGCAGGAGCAAGCCCTCCAGGAAATGGGACTACACCTTAGCCAGTCCAAACTGAAGATGGAAGACATAAAGG 4440
Query 1562 AAGTGAACCAGGCACTGAAGGGCCACGCCTGGCTGAAAGATGACGAAGCGACACACTGTAGGCAGTGTGAGAAG 1635
||||.||..|||||||||||||||||.|.|||.|||||||||||||.||.|||||.||||.|||||||||||||
Sbjct 4441 AAGTAAATAAGGCACTGAAGGGCCACACATGGTTGAAAGATGACGAGGCAACACATTGTAAGCAGTGTGAGAAG 4514
Query 1636 GAGTTCTCCATTTCCCGGAGAAAGCACCACTGCCGGAACTGTGGCCACATCTTCTGCAACACCTGCTCCAGCAA 1709
||.|||||||||||.|||||.||||||||||||||.||||||||||||||.|||||||||||||||||.|||||
Sbjct 4515 GACTTCTCCATTTCTCGGAGGAAGCACCACTGCCGAAACTGTGGCCACATTTTCTGCAACACCTGCTCTAGCAA 4588
Query 1710 CGAGCTGGCCCTGCCCTCCTACCCCAAGCCGGTGCGAGTGTGCGACAGCTGCCACACCCTGCTCCTGCAGCGCT 1783
||||||||||||||||||||||||.|||||.|||||.|||||.|||||||||||.||||||||.||||||||||
Sbjct 4589 CGAGCTGGCCCTGCCCTCCTACCCTAAGCCAGTGCGTGTGTGTGACAGCTGCCATACCCTGCTACTGCAGCGCT 4662
Query 1784 GCTCCTCCACGGCCTCC--------------------------------------------------------- 1800
||||||||||.||||||
Sbjct 4663 GCTCCTCCACTGCCTCCTGAAGCCATCAGCCCCACCCACCAGCAGGGACCTTGACCTGTTGACCTCCATCCTCA 4736
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 4737 GAGTGGAGGAAAGCCTCAGGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGGACCCAAGAGAATCAAA 4810
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 4811 GGAAAGAATGAAACCTTCACCAGGCTGTCAGCCTCGGAAGAGAATGCCAAGTGGCAGCTGAGCACTTTTCCATG 4884
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 4885 GTCTCTATGGAGTCATCTCCTCTAGACAGACACTTCTGTGTCCTCAGTTAAATCCTGGCTTTGGTACAGGTGCA 4958
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 4959 ACTTCATGACTTTGCTACTGTCACCTTCACTTTTCAAAGGGTTAACCTGTTGTGCAGCAGTTGCACTAGAGAAT 5032
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 5033 CCTTTCTCTTTCCTACCCACGTCCCACAGAAACCTTGATTTCTGCTGTGCTTTGAACCTTGTGGGTCTGTCAGT 5106
Query 1801 -------------------------------------------------------------------------- 1800
Sbjct 5107 GTGCCTTGTCTGCTTCGGCATCCAGCATTTGCCATCATGCTCCTGCCAACACCTACTGTCAGCCCTGCAATAAA 5180
Query 1801 ------------------------------- 1800
Sbjct 5181 ATCCTTTATTTTTCACTCTTGTACAGACAAA 5211
