Nucleotide Global Alignment
Description
- Query:
- TRCN0000469018
- Subject:
- NR_029419.1
- Aligned Length:
- 2764
- Identities:
- 1333
- Gaps:
- 1303
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCAGGACTTCCGGCCGAGCCGGAAGACCTTTCCCTTCGCGGTTTCGAGAGCTCCGTTTTGCAGAACCTGAAG 74
Query 1 --------------------------------------------------------------ATGGGTGTGATA 12
||||||||||||
Sbjct 75 GGGAGATTCTGGACGGTCCCGGGGACTCTAGACTGTCTGTCCCACGACCTGTTCTTGGCGTTATGGGTGTGATA 148
Query 13 GGTATACAGCTGGTTGTTACCATGGTGATGGCCAGTGTCATGCAGAAGATTATACCTCACTATTCTCTTGCTCG 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGTATACAGCTGGTTGTTACCATGGTGATGGCCAGTGTCATGCAGAAGATTATACCTCACTATTCTCTTGCTCG 222
Query 87 ATGGCTACTCTGTAATGGCAGTTTGAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAATTCTTGCAGGGA 160
|||||||||||||||||||||||||||.|||||||||||||||.|.|||||||||||||||||.||||||||||
Sbjct 223 ATGGCTACTCTGTAATGGCAGTTTGAGATGGTATCAACATCCTTCCGAAGAAGAATTAAGAATCCTTGCAGGGA 296
Query 161 AACAACAAAAAGGGAAAACCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCATTAACCATTCCA 234
|.||.||.|||||.||||..||||||||.||.|||||.|||||.||.|||||||.|||||||.|||||||||||
Sbjct 297 AGCAGCAGAAAGGAAAAAGTAAAAAAGACAGAAAATACAATGGCCATATTGAAAATAAGCCACTAACCATTCCA 370
Query 235 AAGGATATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTAGCATTGCATTACTTTCCAGA 308
||.||.||||||||||||||||||||.|||||.||||||||||||||.|||||||||.||||||||||.|||||
Sbjct 371 AAAGACATTGACCTTCATCTAGAAACCAAGTCTGTTACAGAAGTGGACACTTTAGCACTGCATTACTTCCCAGA 444
Query 309 ATACCAGTGGCTGGTGGATTTCACAGTGGCTGCTACAGTTGTGTATCTAGTAACTGAAGTCTACTACAATTTTA 382
||||||||||||||||||.|||||.|||||||||||..||||.|||.||||||||||.|||||.||||..||.|
Sbjct 445 ATACCAGTGGCTGGTGGACTTCACGGTGGCTGCTACCATTGTCTATTTAGTAACTGAGGTCTATTACAGCTTCA 518
Query 383 TGAAGCCTACACAGGAAATGAATATCAGCTTAGTCTGGTGCCTACTTGTTTTGTCTTTTGCAATCAAAGTTCTA 456
||||||||||||||||||||||||||||||||||.||||||||.||.|||||||||||||||||||||||||||
Sbjct 519 TGAAGCCTACACAGGAAATGAATATCAGCTTAGTTTGGTGCCTCCTGGTTTTGTCTTTTGCAATCAAAGTTCTA 592
Query 457 TTTTCATTAACTACACACTATTTTAAAGTAGAAGATGGTGGTGAAAGATCTGTTTGTGTCACCTTTGGATTTTT 530
||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||||||||||||||||||||
Sbjct 593 TTTTCATTAACTACACACTATTTTAAAGTAGAAGATGGAGGTGAAAGGTCAGTTTGTGTCACCTTTGGATTTTT 666
Query 531 TTTCTTTGTCAAAGCAATGGCAGTGTTGATTGTAACAGAAAATTATCTGGAATTTGGACTTGAAACAGGGTTTA 604
||||||.||.||||||||||||||.|||||.||||||||.||.||.|||||.|||||.||||||||||||||||
Sbjct 667 TTTCTTCGTTAAAGCAATGGCAGTTTTGATCGTAACAGAGAACTACCTGGAGTTTGGCCTTGAAACAGGGTTTA 740
Query 605 CAAATTTTTCAGACAGTGCGATGCAGTTTCTTGAAAAGCAAGGTTTAGAATCTCAGAGTCCTGTTTCAAAACTT 678
|||||||||||||||||||.||||||||||||||||||||.|||||||||||||||.|.|||||||||||||||
Sbjct 741 CAAATTTTTCAGACAGTGCAATGCAGTTTCTTGAAAAGCAGGGTTTAGAATCTCAGGGCCCTGTTTCAAAACTT 814
Query 679 ACTTTCAAATTTTTCCTGGCTATTTTCTGTTCATTCATTGGGGCTTTTTTGACATTTCCTGGATTACGACTGGC 752
|||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||.|||||
Sbjct 815 ACTTTCAAATTTTTCCTGGCTGTTTTCTGTTCACTCATTGGGGCTTTTTTGACATTTCCTGGATTACGGCTGGC 888
Query 753 TCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACA-------------------------- 800
|||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 889 TCAAATGCATCTGGATGCCCTGAATATGGCAACAGAAAAAATTACACAGTAAGCGGAAAATGTACATAAGCACA 962
Query 801 ----------------------------------AACTTTACTTCATATCAACTTCTTGGCACCTTTATTTATG 840
|||.||||||||||||||||||||||||||||||||||||
Sbjct 963 TGCAGATAAATATATGTTTTCCATCTTAATTAAGAACATTACTTCATATCAACTTCTTGGCACCTTTATTTATG 1036
Query 841 GTTTTGCTCTGGGTAAAACCAATCACCAAAGACTACATTATGAACCCACCACTGGGCAAAGAAAGTATCCCTTT 914
|||.||||||||||.||||||||||||||||||||.||.|||||||||||..||||.|.|||.|||.|||||.|
Sbjct 1037 GTTCTGCTCTGGGTGAAACCAATCACCAAAGACTATATCATGAACCCACCGTTGGGTAGAGAGAGTGTCCCTCT 1110
Query 915 AATGACAGAAGCCACATTCGATACTCTGCGACTCTGGTTAATAATCCTGCTGTGTGCTTTGCGGTTGGCCATGA 988
||||||||||||||||||.||||||||.|||||||||||||||||||||||.||||.|||||||||||||||||
Sbjct 1111 AATGACAGAAGCCACATTTGATACTCTTCGACTCTGGTTAATAATCCTGCTCTGTGTTTTGCGGTTGGCCATGA 1184
Query 989 TGCGTAGTCACCTGCAAGCTTATTTAAATTTAGCCCAAAAATGTGTGGATCAGATGAAGAAAGAAGCGGGGCGA 1062
||||.||||||||||||||.|||||||||||.|||||.||||||||||||||.||||||||||||||.||.|||
Sbjct 1185 TGCGAAGTCACCTGCAAGCATATTTAAATTTGGCCCAGAAATGTGTGGATCAAATGAAGAAAGAAGCTGGCCGA 1258
Query 1063 ATAAGCACGGTTGAGCTACAGAAAATGGTGGCTCGAGTCTTTTATTATCTTTGTGTCATTGCACTGCAGTATGT 1136
|||||.||.|||||||||||||||||||||||.|||||||||||.||.||.|||||||||||.|||||||||||
Sbjct 1259 ATAAGTACAGTTGAGCTACAGAAAATGGTGGCGCGAGTCTTTTACTACCTGTGTGTCATTGCCCTGCAGTATGT 1332
Query 1137 GGCGCCTCTGGTAATGCTGCTTCACACAACTCTGCTTTTGAAAACACTAGGTAATCATTCCTGGGGTATTTATC 1210
|||.||||||||||||||||||||.|..|||||||||.||||||||||||||||||||||||||||.|||||||
Sbjct 1333 GGCACCTCTGGTAATGCTGCTTCATATGACTCTGCTTCTGAAAACACTAGGTAATCATTCCTGGGGAATTTATC 1406
Query 1211 CAGAATCTATCTCTACCTTACCAGTGGATAATAGTCTACTGTCCAATTCTGTTTACTCTGAATTACCATCAGCT 1284
|||||.|...||.|.||||.|||||||||||||.|||.|...||||.||.|.||||.|||||.||||||||.||
Sbjct 1407 CAGAAGCCGCCTTTCCCTTGCCAGTGGATAATAATCTCCCCGCCAACTCGGCTTACCCTGAACTACCATCACCT 1480
Query 1285 GAAGGGAAAATGAAGGTAACTGTTACACAAATAACAGTGGCACTGAGCAGCTTAAAAAATATTTTTACTCCTCT 1358
||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.||.||.||.|||||
Sbjct 1481 GATGGGAAGATGAAGGTAACTGTTACACAAATCACAGTGGCCCTGAGCAGCTTAAAAAACATCTTCACGCCTCT 1554
Query 1359 TCTTTTTCGAGGACTTCTGTCTTTTCTGACCTGGTGGATTGCTGCTTGCCTCTTTTCTACAAGCCTTTTTGGGC 1432
.||||||||||||||||||||.|||.||||.|||||||||||.|||||||||||||||||||||||||||||||
Sbjct 1555 CCTTTTTCGAGGACTTCTGTCATTTTTGACATGGTGGATTGCAGCTTGCCTCTTTTCTACAAGCCTTTTTGGGC 1628
Query 1433 TTTTCTATCACCAGTATCTGACTGTGGCA--------------------------------------------- 1461
||||||||||.||||||.||||.||||||
Sbjct 1629 TTTTCTATCATCAGTATTTGACAGTGGCATGAATTTCAGTCAAAAACGGATATCCAAGTCACACTTTAAATTCA 1702
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1703 AATATCTGTGCCCTTGAAGGATTGACAAAAGAAGAATGCAAATAGAACGGAGAAAAAAATTATTGGAGTGTTTT 1776
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1777 GTTTTGAATGCTTCCTCTGTACTCTCAGGGTGAATTAATGTTGTAATATTTAAAACTCATGAGATAGGTTGTTA 1850
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1851 CACTGTTACACACTGTGGCATTGGAATTGTAACTCATTGAGAGAACTAATGTGAGAGGGCTCTCTGCAGGGGTA 1924
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1925 ATCCTTCTGATTATCTTGGTTTACAGTTGCAAACCTCCAACAGTCTGTTAGACTTCTTCTAGGACTCCAGTTAC 1998
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1999 TGACTGCTTTTCATGGTGTTGTGGTACTGTTACTACTCATAGTTGCTGCCTACAGAACAATCTTCAAACTGAGC 2072
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2073 CATGCTCGAGGGAAGGGAAAGGAACGAAAATTACTTCTGTTGGTAATGTATTAGTCTTAAAAAAAAATCCAACA 2146
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2147 GAAAGGAAGAGAAAGCTACTGTATATTACAGTAAGAAAAGCTGCATAGTCATTTTAAATTGAATGGAGATATAA 2220
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2221 ATTACCTATTGTCTACAAGTACTGTTACTTGAGAGTAGCAGGAATATTCTTTTAAAGTGAATGCCACCCAGCTT 2294
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2295 GAAAGTTCTTTTTAAATGATTGGCCATATGAACATCAGCGGTCTCACTGTTAGTTTTGGGCCTTGCTGTATTTT 2368
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2369 ATTTTTTCTTTGATTTTAAATAGTTATGTTTAATCTAAAAATATTTATCAATACTGATCAAATTTGAGAATTAC 2442
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2443 TTTGCAATCCTGCTGACTACGTGTATGTATTGTGTATATATTATATATTAAATATATAATATATTGAGGTTATA 2516
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2517 AAAGATGAAAATATTGAATCCTTATAATATTTTAAGTTTCAGAACGTACGTTAAACAATGATTTGAATGAGATG 2590
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2591 TATTTGTATCTGGAAATTTCTGTTTGGAATGAGATTAAAATACATTTTTTTAAAGCTCAACAGAGTGTAATTTA 2664
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 2665 TTTGTTGTACATATATGATAATAGTACTTAAAATGTCATGAAGATTAGTTGATTTCTCACAAATTAAATTTCAT 2738
Query 1462 -------------------------- 1461
Sbjct 2739 TTTCTGTTAAAAAAAAAAAAAAAAAA 2764
