Nucleotide Global Alignment
Description
- Query:
- TRCN0000469018
- Subject:
- XM_017009097.2
- Aligned Length:
- 1851
- Identities:
- 1019
- Gaps:
- 804
Alignment
Query 1 ATGGGTGTGATAGGTATACAGCTGGTTGTTACCATGGTGATGGCCAGTGTCATGCAGAAGATTATACCTCACTA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTCTCTTGCTCGATGGCTACTCTGTAATGGCAGTTTGAGGTGGTATCAACATCCTACAGAAGAAGAATTAAGAA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTCTTGCAGGGAAACAACAAAAAGGGAAAACCAAAAAAGATAGGAAATATAATGGTCACATTGAAAGTAAGCCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTAACCATTCCAAAGGATATTGACCTTCATCTAGAAACAAAGTCAGTTACAGAAGTGGATACTTTAGCATTGCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TTACTTTCCAGAATACCAGTGGCTGGTGGATTTCACAGTGGCTGCTACAGTTGTGTATCTAGTAACTGAAGTCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACTACAATTTTATGAAGCCTACACAGGAAATGAATATCAGCTTAGTCTGGTGCCTACTTGTTTTGTCTTTTGCA 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------ATGAAGCCTACACAGGAAATGAATATCAGCTTAGTCTGGTGCCTACTTGTTTTGTCTTTTGCA 63
Query 445 ATCAAAGTTCTATTTTCATTAACTACACACTATTTTAAAGTAGAAGATGGTGGTGAAAGATCTGTTTGTGTCAC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 ATCAAAGTTCTATTTTCATTAACTACACACTATTTTAAAGTAGAAGATGGTGGTGAAAGATCTGTTTGTGTCAC 137
Query 519 CTTTGGATTTTTTTTCTTTGTCAAAGCAATGGCAGTGTTGATTGTAACAGAAAATTATCTGGAATTTGGACTTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 138 CTTTGGATTTTTTTTCTTTGTCAAAGCAATGGCAGTGTTGATTGTAACAGAAAATTATCTGGAATTTGGACTTG 211
Query 593 AAACAGGGTTTACAAATTTTTCAGACAGTGCGATGCAGTTTCTTGAAAAGCAAGGTTTAGAATCTCAGAGTCCT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 AAACAGGGTTTACAAATTTTTCAGACAGTGCGATGCAGTTTCTTGAAAAGCAAGGTTTAGAATCTCAGAGTCCT 285
Query 667 GTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCATTCATTGGGGCTTTTTTGACATTTCCTGG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 GTTTCAAAACTTACTTTCAAATTTTTCCTGGCTATTTTCTGTTCATTCATTGGGGCTTTTTTGACATTTCCTGG 359
Query 741 ATTACGACTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACAAACTTTACTTCATA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 ATTACGACTGGCTCAAATGCATCTGGATGCCCTGAATTTGGCAACAGAAAAAATTACACAAACTTTACTTCATA 433
Query 815 TCAACTTCTTGGCACCTTTATTTATGGTTTTGCTCTGGGTAAAACCAATCACCAAAGACTACATTATGAACCCA 888
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 TCAACTTCTTGGCACCTTTATTTATGGTTCTGCTCTGGGTAAAACCAATCACCAAAGACTACATTATGAACCCA 507
Query 889 CCACTGGGCAAAGAAAGTATCCCTTTAATGACAGAAGCCACATTCGATACTCTGCGACTCTGGTTAATAATCCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 CCACTGGGCAAAGAAAGTATCCCTTTAATGACAGAAGCCACATTCGATACTCTGCGACTCTGGTTAATAATCCT 581
Query 963 GCTGTGTGCTTTGCGGTTGGCCATGATGCGTAGTCACCTGCAAGCTTATTTAAATTTAGCCCAAAAATGTGTGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 GCTGTGTGCTTTGCGGTTGGCCATGATGCGTAGTCACCTGCAAGCTTATTTAAATTTAGCCCAAAAATGTGTGG 655
Query 1037 ATCAGATGAAGAAAGAAGCGGGGCGAATAAGCACGGTTGAGCTACAGAAAATGGTGGCTCGAGTCTTTTATTAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 ATCAGATGAAGAAAGAAGCGGGGCGAATAAGCACGGTTGAGCTACAGAAAATGGTGGCTCGAGTCTTTTATTAT 729
Query 1111 CTTTGTGTCATTGCACTGCAGTATGTGGCGCCTCTGGTAATGCTGCTTCACACAACTCTGCTTTTGAAAACACT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 CTTTGTGTCATTGCACTGCAGTATGTGGCGCCTCTGGTAATGCTGCTTCACACAACTCTGCTTTTGAAAACACT 803
Query 1185 AGGTAATCATTCCTGGGGTATTTATCCAGAATCTATCTCTACCTTACCAGTGGATAATAGTCTACTGTCCAATT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 AGGTAATCATTCCTGGGGTATTTATCCAGAATCTATCTCTACCTTACCAGTGGATAATAGTCTACTGTCCAATT 877
Query 1259 CTGTTTACTCTGAATTACCATCAGCTGAAGGGAAAATG----------------AAGGT--AACTGTTACACAA 1314
|||||||||||||||||||||||||||||||||||||| ||||| |.|.|||.|||
Sbjct 878 CTGTTTACTCTGAATTACCATCAGCTGAAGGGAAAATGAAGCATAATGCAAGGCAAGGTCCAGCCGTTCCAC-- 949
Query 1315 ATAACAGTGGCA------CT----GAGCAG----CTTAAAAAATATTTTTACTCC------------------- 1355
..|||| || |||||| |||..||.|| ||||
Sbjct 950 ------CCGGCATGCAAGCTTATGGAGCAGCCCCCTTTGAAGAT-------CTCCAGCTAGACTTCACAGAGAT 1010
Query 1356 ---------------TCTTCTTTTTCGA---GGACT---------------------------TCTGTCTTTT- 1383
||||.||..|.|| ||||| .|||.|.|||
Sbjct 1011 GCCAAAGTGTGGAGATCTTATTCCTAGATTTGGACTGCCCTTACGGATCGGCTCAGATAATGGGCTGGCGTTTG 1084
Query 1384 ---CTGACCTGGT-----------------------GGAT----TG----CTGCTTGCCTCTTTTCTACAAGCC 1423
|||||.|||| |||| || ||||.||| |..||||..|||
Sbjct 1085 TGGCTGACTTGGTACAGAAGACGGCAAAGGTACTGGGGATCACATGGAAACTGCATGC----TGCCTACTGGCC 1154
Query 1424 T-----TTTTG------------GGCTTTTCTATCACCAGTATCTGACTGTGGCA------------------- 1461
| ||..| ||.| |.|||.||||.| ||
Sbjct 1155 TCAGAGTTCCGGAAAGGTGGAGCGGAT------------GAATCAGACTAT--CAAAAATAGTTTAGGGAAAGT 1214
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1215 ATGTCAGGAAAAAGGATTAAAATGGATACAGGCTCTCCCTATGGTATTATTTAAAATTAGATGTACCCCTTCTA 1288
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1289 AAAGAGCAGGATATTCCCCTTATAAAATACTATATCATAGGCCCCCTCCCATATTGTGGGGACTTCCAGGCACT 1362
Query 1462 -------------------------------------------------------------------------- 1461
Sbjct 1363 CCCCAAGAGTTAGGTGAAATTGAGTTACAGCGACAGCTACAGGCTTTAGGAAAAATTACACAATCTCAGCCTGG 1436
Query 1462 - 1461
Sbjct 1437 G 1437
