Nucleotide Global Alignment

Description

Query:
TRCN0000469041
Subject:
XM_011518648.3
Aligned Length:
3018
Identities:
1378
Gaps:
1638

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGTCTGGGCTTGATTACCGACGACTTGATGGAAGTACAAAATCAGAGGAAAGACTCAAGATTGTAAAAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTTCAACAGTACACAAGATGTTAACATTTGCCTTGTCTCTACAATGGCTGGTGGACTAGGCCTCAATTTTGTCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGCCAATGTTGTTGTATTATTTGATCCTACTTGGAATCCAGCCAATGATCTTCAAGCCATTGACAGAGCATAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGATTGGACAATGTAGAGATGTCAAAGTGCTTAGGCTGATATCCTTGGGAACTGTGGAGGAAATCATGTATTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACGACAGATATACAAGCAGCAACTTCACTGTGTGGTGGTTGGAAGTGAAAATGCCAAACGATATTTTGAAGCAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTCAAGGATCTAAAGAGCATCAAGGAGAGCTTTTTGGGATCCATAACCTCTTCAAATTTAGGTCCCAAGGGTCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGTCTTACGAAGGACATCCTGGAGAGAGAAGGCCAAGTAGAAGCAGGGATCATGACAGCCACAACATGGTTGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAGGGACCTCCAGCACACAAACTGGAAATGCCTAGACAGCCTGACTGTCAGGAATGCAGAGGTACAGAACAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGCAGAGCCACTGGCAAAGGAAGCATGTGATCTCTGCAGTGACTTCAGTGATGAAGAGCCAGTGGGAGCCACA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGAATAAAGACTGCCAAAAACAAAGCACCCGATTCAAGTAAAGCTTCCAGCTCTCCAGGACAGCTTACCTTACT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCAGTGTGGTTTCTCGAAATTGCTTGAAACAAAATGTAAAGCAGTTGAGGATAGTGATGGAAATACTGCCTCTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGATGAAAGTTCTGATGAGCAGCCCACATGCCTTTCAACAGAAGCCAAAGATGCTGGTTGTGAGAAAAATCAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GACTCTCTTGGTACTTCAAAACATCAGAAATTAGATAACATCCTAAATCCAAAAGAAAAGCATATTTTTTATAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAGTGAGAAGATTTTAGAACAGAATATTTCTTCCAAGTCTGACGAGAAAAAAATTAAAAATACAGATAAACATT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCATTTTACAGAATGTCACAGAATCAGAAGATAGTGATGTCATCTGTCCTACACAATACACAACTGAGAGATTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCGACAATAGTATAAGGTTTAAGCCACCCTTGGAAGGATCTGAGGATTCTGAAACAGAACACACTGTAAAAAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAGAAATAATGATAATAGTCGAAACACTGATGACAAAAGAAATGGAATAATTTCAAAAAAGTTAAGTCCTGAGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACACAACCCTGAAATCTATTTTGAAAAGAAAAGGCACCAGTGATATCAGTGATGAATCTGATGACATTGAAATT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCTTCCAAGTCAAGAGTAAGAAAGAGAGCTAGTTCATTGAGGTTTAAGAGAATAAAAGAAACCAAAAAAGAACT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCACAATTCTCCCAAAACAATGAACAAAACAAACCAAGTGTATGCAGCAAATGAGGATCATAACTCTCAGTTTA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTGATGATTATTCATCCTCAGATGAGAGTTTATCCGTCAGCCACTTCAGTTTCTCTAAACAGAGCCACAGACCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAACTATAAGAGACAGAACTAGTTTTTCTTCAAAATTGCCTAGCCATAATAAGAAAAATAGCACTTTTATTCC  1628

Query    1  ----------ATGAAACGTTCAAATGAGAAAGTTGTTAATCAAGAGCAGTCGTATGAATCAATGGATAAATTTT  64
                      ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AAGAAAACCAATGAAATGTTCAAATGAGAAAGTTGTTAATCAAGAGCAGTCGTATGAATCAATGGATAAATTTT  1702

Query   65  TAGATGGCGTTCAGGAAGTGGCTTATATTCACTCAAACCAGAATGTAATTGGATCGAGCAAAGCTGAAAATCAC  138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TAGATGGCGTTCAGGAAGTGGCTTATATTCACTCAAACCAGAATGTAATTGGATCGAGCAAAGCTGAAAATCAC  1776

Query  139  ATGAGCCGATGGGCAGCACATGACGTATTTGAGTTGAAGCAGTTTTCTCAGCTGCCTGCTAACATAGCTGTTTG  212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ATGAGCCGATGGGCAGCACATGACGTATTTGAGTTGAAGCAGTTTTCTCAGCTGCCTGCTAACATAGCTGTTTG  1850

Query  213  CAGTTCTAAGACATATAAAGAAAAAGTGGATGCAGATACATTGCCACACACAAAGAAAGGCCAGCAACCTAGTG  286
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1851  CAGTTCTAAGACATATAAAGAAAAAGTGGATGCAGATACATTGCCACACACAAAGAAAGGCCAGCAACCGAGTG  1924

Query  287  AAGGCAGCATTTCACTTCCTCTTTACATTTCAAATCCTGTAAACCAGAAGAAGAAAAAAGTCTACCATACAAAC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AAGGCAGCATTTCACTTCCTCTTTACATTTCAAATCCTGTAAACCAGAAGAAGAAAAAAGTCTACCATACAAAC  1998

Query  361  CAGACCACCTTCATAATTGGAGAAACACCAAAAGGAATCCGCAGAAAACAATTTGAAGAAATGGCCTCTTATTT  434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CAGACCACCTTCATAATTGGAGAAACACCAAAAGGAATCCGCAGAAAACAATTTGAAGAAATGGCCTCTTATTT  2072

Query  435  TAACTCGTCTTCTGTAAACGAATTTGCTAAACATATAACCAATGCCACATCAGAAGAACGACAGAAAATGCTAA  508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TAACTCGTCTTCTGTAAACGAATTTGCTAAACATATAACCAATGCCACATCAGAAGAACGACAGAAAATGCTAA  2146

Query  509  GAGACTTTTATGCTTCTCAATATCCAGAGGTAAAAGAATTTTTTGTGGATTCTGTGTCACAATTCAACAATTCT  582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GAGACTTTTATGCTTCTCAATATCCAGAGGTAAAAGAATTTTTTGTGGATTCTGTGTCACAATTCAACAATTCT  2220

Query  583  TCCTTTGAGAAAGGAGAGCAGCGCACCCGGAAGAAATCTGATAAAAGAGAATCTCTTATAAAACCAAGGCTGTC  656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  TCCTTTGAGAAAGGAGAGCAGCGCACCCGGAAGAAATCTGATAAAAGAGAATCTCTTATAAAACCAAGGCTGTC  2294

Query  657  AGATTCTGAAACCTTGTCATTTAAAGATTCTACCAACAAAATTTCTCAAGTTTGCAGCCTAAAAACATATAAAA  730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AGATTCTGAAACCTTGTCATTTAAAGATTCTACCAACAAAATTTCTCAAGTTTGCAGCCTAAAAACATATAAAA  2368

Query  731  GAAAATCAGTTAAGTTTCAGAATCATATTTCCTATAGAGAAGAGGTGTTTTTTAATGATGCAGAAACTAAGAAA  804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  GAAAATCAGTTAAGTTTCAGAATCATATTTCCTATAGAGAAGAGGTGTTTTTTAATGATGCAGAAACTAAGAAA  2442

Query  805  TCACCTGTTAGTTCTACTCAAGAGATTGACAGTGGGAAAAACAGCCAGGCATCCGAAGATACTGTGACATCCCG  878
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  TCACCTGTTAGTTCTACTCAAGAGATTGACAGTGGGAAAAACAGCCAGGCATCCGAAGATACTGTGACATCCCG  2516

Query  879  TTCTCTGAACAGTGAGTCTGAAACACGTGAGAGAAGGTTAGAAAATACCATGAAAGACCAACAGGACCTCACAA  952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  TTCTCTGAACAGTGAGTCTGAAACACGTGAGAGAAGGTTAGAAAATACCATGAAAGACCAACAGGACCTCACAA  2590

Query  953  GAACGGGCATTTCAAGAAAAGAACCCCTTCTCAAATTGGAAAACAAAAAGATAGAAAATCCAGTGCTGGAAAAT  1026
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  GAACGGGCATTTCAAGAAAAGAACCCCTTCTCAAATTGGAAAACAAAAAGATAGAAAATCCAGTGCTGGAAAAT  2664

Query 1027  ACTTCTGTGATAAGCTTACTTGGTGATACCTCTATTCTTGATGACCTTTTTAAAAGTCATGGGAACAGTCCCAC  1100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  ACTTCTGTGATAAGCTTACTTGGTGATACCTCTATTCTTGATGACCTTTTTAAAAGTCATGGGAACAGTCCCAC  2738

Query 1101  ACAACTGCCAAAGAAAGTTCTTTCAGGGCCCATGGAAAAAGCAAAACAGAGACCAAAAGATTTCTGGGACATCT  1174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  ACAACTGCCAAAGAAAGTTCTTTCAGGGCCCATGGAAAAAGCAAAACAGAGACCAAAAGATTTCTGGGACATCT  2812

Query 1175  TGAATGAGCAGAATGATGAGAGTCTTAGTAAACTCACAGACTTGGCAGTAATAGAGACTCTGTGTGAAAAAGCA  1248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  TGAATGAGCAGAATGATGAGAGTCTTAGTAAACTCACAGACTTGGCAGTAATAGAGACTCTGTGTGAAAAAGCA  2886

Query 1249  CCTCTAGCAGCACCCTTTAAAAGGAGAGAAGAGCCAGCAACTTCTCTTTGGAAATCAAATGAGAAATTTTTATG  1322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  CCTCTAGCAGCACCCTTTAAAAGGAGAGAAGAGCCAGCAACTTCTCTTTGGAAATCAAATGAGAAATTTTTATG  2960

Query 1323  GAAGAAATTTAGCCCAAGTGATACAGATGAAAACGCAACCAATACACAGAGTACCACA  1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  GAAGAAATTTAGCCCAAGTGATACAGATGAAAACGCAACCAATACACAGAGTACCACA  3018

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