Nucleotide Global Alignment
Description
- Query:
- TRCN0000469068
- Subject:
- XM_017001563.2
- Aligned Length:
- 1622
- Identities:
- 871
- Gaps:
- 727
Alignment
Query 1 ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGGTGCTATCTTTGAGCTTGGACCTCGGGGAATTAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTACGTGGGCGGTGCCCTGCATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCCCTTCACCCCCCTTCTCCA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AACCTCTGTTTTGGGCTGGGCTGAGGGAGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGACTGTGCACAGT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTTGCCCAGCGCCGCCTTGGACCTGAGGTGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGG 518
||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------------------------ATGGACAGTCTCTGCCGTGGAGTGTTTGCAGG 32
Query 519 CAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATAT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33 CAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATAT 106
Query 593 TACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107 TACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAG 180
Query 667 CGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAG 254
Query 741 GGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 GGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTC 328
Query 815 TAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 TAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCT 402
Query 889 GCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 GCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTA 476
Query 963 CCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 CCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAA 550
Query 1037 TCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGGGA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 TCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGGGA 624
Query 1111 GGTTCCTGGTTACAGACACTGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 GGTTCCTGGTTACAGACACTGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGA 698
Query 1185 AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 699 AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGA--------C 764
Query 1259 C-----CCAGT----------ATACACT------AGGTC-----ACTGGCAAAAACTA--GAGT---CAG---- 1297
| ||||| |.|.|.| |||.| |.|||| ||| |||| |||
Sbjct 765 CAAGAACCAGTTGAAGTGGCGACAGAGTCATGACAGGACCGTGGAGTGGC-----CTAAGGAGTACCCAGGGCG 833
Query 1298 --CTAGGCAA----------------TTCCTG-------------ACTGCTCA----CAGGTTGCCCCTGAC-- 1334
.||||.|| |||.|| |||.|||| |||| |.||.||||
Sbjct 834 AAGTAGGAAACAGGCTCCTTCTATTCTTCATGTGCCTGGGTGCCAACTCCTCAGGTGCAGG--GACCGTGACCA 905
Query 1335 TCTGGCTGGAGCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCG-----CCAG-GCAGCA- 1401
.||||..|..|||||| |.||.|.|| |||| ||| ||
Sbjct 906 CCTGGGGGCTGCCTCC--------------------------------GTGTCGACGCATTCCCAGCGCA-CAT 946
Query 1402 -----GTCAGTGT-----CCTG--GGCACAG--AACCTAACAGC------------------------------ 1431
||| |.| |||| |.|||.| |.||.||||||
Sbjct 947 ACCTGGTC--TTTTGCTGCCTGTCGTCACCGCCACCCCAACAGCCGGGCAGGCATCGCTGCCGCCATCTTGGAA 1018
Query 1432 -------------------------------------------------------------------- 1431
Sbjct 1019 GCGGGCGCTGCGGGGGCGGGGTCTCGCGTCATGGGGCGGGGCCTCGGGGCGGAGCCACCCGGGCTGAC 1086