Nucleotide Global Alignment

Description

• Query: TRCN0000469068
• Subject: XM_017001564.1
• Aligned Length: 1622
• Identities: 871
• Gaps: 727

Alignment

Query    1  ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGCATCAGCGGCTTGGCCGCCAGTTACCACCTGAGCCGGGCCCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTGCCCCCCTAAGGTGGTCCTAGTGGAGAGCAGTGAGCGTCTGGGAGGCTGGATTCGCTCCGTTCGAGGCCCTA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGGTGCTATCTTTGAGCTTGGACCTCGGGGAATTAGGCCAGCGGGAGCCCTAGGGGCCCGGACCTTGCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GTTTCTGAGCTTGGCTTGGATTCAGAAGTGCTGCCTGTCCGGGGAGACCACCCAGCTGCCCAGAACAGGTTCCT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTACGTGGGCGGTGCCCTGCATGCCCTACCCACTGGCCTCAGGGGGCTACTCCGCCCTTCACCCCCCTTCTCCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AACCTCTGTTTTGGGCTGGGCTGAGGGAGCTGACCAAGCCCCGGGGCAAAGAGCCTGATGAGACTGTGCACAGT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TTTGCCCAGCGCCGCCTTGGACCTGAGGTGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGG  518
                                                      ||||||||||||||||||||||||||||||||
Sbjct    1  ------------------------------------------ATGGACAGTCTCTGCCGTGGAGTGTTTGCAGG  32

Query  519  CAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATAT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   33  CAACAGCCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATAT  106

Query  593  TACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107  TACTGGGCCTGCTGCTGGGGGCAGGGCGGACCCCACAGCCAGACTCAGCACTCATTCGCCAGGCCTTGGCTGAG  180

Query  667  CGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  CGCTGGAGCCAGTGGTCACTTCGTGGAGGTCTAGAGATGTTGCCTCAGGCCCTTGAAACCCACCTGACTAGTAG  254

Query  741  GGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  255  GGGGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGGCGCTGGAAGGTATCTC  328

Query  815  TAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  329  TAAGGGACAGCAGTCTGGAGGCTGACCACGTTATTAGTGCCATTCCAGCTTCAGTGCTCAGTGAGCTGCTCCCT  402

Query  889  GCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  403  GCTGAGGCTGCCCCTCTGGCTCGTGCCCTGAGTGCCATCACTGCAGTGTCTGTAGCTGTGGTGAATCTGCAGTA  476

Query  963  CCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  477  CCAAGGAGCCCATCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAGGAGTCCTGGGAA  550

Query 1037  TCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGGGA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  551  TCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGACGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGCTGGGA  624

Query 1111  GGTTCCTGGTTACAGACACTGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  625  GGTTCCTGGTTACAGACACTGGAGGCTAGTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGCGGGCCCAGGA  698

Query 1185  AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGAACTGCATTC  1258
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |
Sbjct  699  AGCAGCTGCTACACAATTAGGACTGAAGGAGATGCCGAGCCACTGCTTGGTCCATCTACACAAGA--------C  764

Query 1259  C-----CCAGT----------ATACACT------AGGTC-----ACTGGCAAAAACTA--GAGT---CAG----  1297
            |     |||||          |.|.|.|      |||.|     |.||||     |||  ||||   |||    
Sbjct  765  CAAGAACCAGTTGAAGTGGCGACAGAGTCATGACAGGACCGTGGAGTGGC-----CTAAGGAGTACCCAGGGCG  833

Query 1298  --CTAGGCAA----------------TTCCTG-------------ACTGCTCA----CAGGTTGCCCCTGAC--  1334
              .||||.||                |||.||             |||.||||    ||||  |.||.||||  
Sbjct  834  AAGTAGGAAACAGGCTCCTTCTATTCTTCATGTGCCTGGGTGCCAACTCCTCAGGTGCAGG--GACCGTGACCA  905

Query 1335  TCTGGCTGGAGCCTCCTATGAGGGAGTTGCTGTTAATGACTGTATAGAGAGTGGGCG-----CCAG-GCAGCA-  1401
            .||||..|..||||||                                |.||.|.||     |||| ||| || 
Sbjct  906  CCTGGGGGCTGCCTCC--------------------------------GTGTCGACGCATTCCCAGCGCA-CAT  946

Query 1402  -----GTCAGTGT-----CCTG--GGCACAG--AACCTAACAGC------------------------------  1431
                 |||  |.|     ||||  |.|||.|  |.||.||||||                              
Sbjct  947  ACCTGGTC--TTTTGCTGCCTGTCGTCACCGCCACCCCAACAGCCGGGCAGGCATCGCTGCCGCCATCTTGGAA  1018

Query 1432  --------------------------------------------------------------------  1431
                                                                                
Sbjct 1019  GCGGGCGCTGCGGGGGCGGGGTCTCGCGTCATGGGGCGGGGCCTCGGGGCGGAGCCACCCGGGCTGAC  1086